DC900174

Overview
NameDC900174
Unique NameDC900174
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length450
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8201 contig Csv1_Contig8201:73..521. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_KLUMA (Orotidine 5'-phosphate decarboxylase OS=Kluyveromyces marxianus GN=URA3 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.054e-30
Identity = 72/145 (49.66%), Postives = 94/145 (64.83%), Query Frame = 1
Query:   10 KLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFT-PDFGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIV---DXXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            KL  +M +K+SNLC + DV   AELL++ E +GP ICLLKTHVDIL DF+  +    L+ +AEKH FLIFEDRKFADIGNTV +Q   G++ I +W+DI NAH ++G GIV                    AE+SS G+LA G++
Sbjct:   20 KLLNLMEEKKSNLCASLDVRKTAELLRLVEVLGPYICLLKTHVDILEDFSFENTIVPLKQLAEKHKFLIFEDRKFADIGNTVKLQYTSGVYRIAEWSDITNAHGVTGAGIVAGLKQGAEEVTKEPRGLLMLAELSSKGSLAHGEY 164          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_COCPO (Orotidine 5'-phosphate decarboxylase OS=Coccidioides posadasii GN=URA3 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.054e-30
Identity = 66/148 (44.59%), Postives = 96/148 (64.86%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD------XXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            R+LFQ+  +K+SN+ ++ADV T  ELL +A+++GP + +LKTH+DIL DF+ +  + L+++++KHNFLIFEDRKF DIGNTV  Q  GG   I +WA I+NA ++ GPGI+D                      A M+S G+LA G +
Sbjct:   22 RRLFQIATEKQSNVVVSADVTTTKELLDLADRLGPYMVVLKTHIDILADFSAETITGLQSLSQKHNFLIFEDRKFVDIGNTVQKQYHGGALHISEWAHIVNATVLPGPGIIDALAQVASAPDFPHASDRGLLILATMTSKGSLATGQY 169          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_CLAFU (Orotidine 5'-phosphate decarboxylase OS=Cladosporium fulvum GN=PYR1 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.054e-30
Identity = 71/151 (47.02%), Postives = 94/151 (62.25%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD------XXXXXXXXXXXXXXXXAEMSSAGNLAKGDFRAA 441
            RKLF+V   K+SN+ ++ADV T  ELL +A+++GP I ++KTH+DIL DF P+  + L A+AEKHNFLIFEDRKF DIGNTV  Q  GG   I +WA IIN  ++   GIV                       AEM+S G+LA G++ +A
Sbjct:   22 RKLFEVAEAKKSNVTVSADVTTTKELLDLADRLGPYIAVIKTHIDILSDFGPETINGLNALAEKHNFLIFEDRKFIDIGNTVQKQYHGGALKISEWAHIINCAVLPAEGIVQALAETAQAEDFPHGSERGLLILAEMTSKGSLATGEYTSA 172          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_PICAN (Orotidine 5'-phosphate decarboxylase OS=Pichia angusta GN=URA3 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 3.066e-30
Identity = 67/145 (46.21%), Postives = 95/145 (65.52%), Query Frame = 1
Query:   10 KLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGS-KLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD---XXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            +L  +M  K++NLC + DV    ELL++ +K+GP ICL+KTH+DI+ DF+ +     L+ +A+KHNF+IFEDRKFADIGNTV +Q +GGI+    WADI NAH ++G GIV+                   AE+SS G+LA G++
Sbjct:   19 RLLNLMESKQTNLCASVDVTKTQELLELLDKLGPYICLVKTHIDIVEDFSYEHTILPLQGLAKKHNFMIFEDRKFADIGNTVKLQYKGGIYRTSKWADITNAHGVTGAGIVEGLKQAAEESTDEPRGLLMLAELSSKGSLATGEY 163          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_DEBHA (Orotidine 5'-phosphate decarboxylase OS=Debaryomyces hansenii GN=URA3 PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 3.066e-30
Identity = 70/147 (47.62%), Postives = 97/147 (65.99%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGS--KLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIV---DXXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            ++LF++M  K++NLC + DV +  E L + EK+GP ICL+KTH+DI+ DF+ + G+   L A+A+KHNF+IFEDRKFADIGNTV  Q  GG++ I  W+DI NAH I+G GIV                    AE+SS G+LA G++
Sbjct:   20 QRLFKLMDNKKTNLCASVDVKSTEEFLTLIEKLGPYICLVKTHIDIIDDFSYE-GTVVPLLALAKKHNFMIFEDRKFADIGNTVKSQYSGGVYKIAQWSDITNAHGITGSGIVKGLKEAAQESSKEPRGLLMLAELSSKGSLAYGEY 165          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_PENNA (Orotidine 5'-phosphate decarboxylase OS=Penicillium nalgiovense GN=pyrG PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 4.005e-30
Identity = 71/151 (47.02%), Postives = 93/151 (61.59%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD------XXXXXXXXXXXXXXXXAEMSSAGNLAKGDFRAA 441
            RKLFQV  +K SN+ ++ADV T  ELL +A+++GP I ++KTH+DIL DF+ +    L A+A+KHNFLIFEDRKF DIGNTV  Q   G   I +WA IIN  I+ G GIV+                      AEM+S G+LA G + +A
Sbjct:   22 RKLFQVAEEKRSNVTVSADVTTTKELLDLADRLGPYIAVIKTHIDILSDFSQETIDGLNALAQKHNFLIFEDRKFIDIGNTVQKQYHNGTLRISEWAHIINCSILPGEGIVEALAQTAQATDFPYGSERGLLILAEMTSKGSLATGAYTSA 172          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_PENCA (Orotidine 5'-phosphate decarboxylase OS=Penicillium camembertii GN=pyrG PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 4.005e-30
Identity = 70/151 (46.36%), Postives = 93/151 (61.59%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD------XXXXXXXXXXXXXXXXAEMSSAGNLAKGDFRAA 441
            RKLFQV  +K+SN+ ++ADV T  ELL +A+++GP I ++KTH+DIL DF+ +    L A+A+KHNFLIFEDRKF DIGNTV  Q   G   I +WA IIN  ++ G GIV                       AEM+S G+LA G + +A
Sbjct:   22 RKLFQVAEEKKSNVTVSADVTTTKELLDLADRLGPYIAVIKTHIDILSDFSQETIDGLNALAQKHNFLIFEDRKFIDIGNTVQKQYHNGTLRISEWAHIINCSVLPGEGIVQALAQTAQATDFPYGSERGLLILAEMTSKGSLATGSYTSA 172          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_ASPOR (Orotidine 5'-phosphate decarboxylase OS=Aspergillus oryzae GN=pyrG PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 4.005e-30
Identity = 69/148 (46.62%), Postives = 94/148 (63.51%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIVD------XXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            +KLF+V   K++N+ ++ADV T  ELL +A+++GP I ++KTH+DIL DF+ +  + L+A+AEKHNFLIFEDRKF DIGNTV  Q  GG   I +WA IIN  I+ G GIV+                      AEM+S G+LA G +
Sbjct:   22 KKLFEVAEAKKTNVTVSADVTTTKELLDLADRLGPYIAVIKTHIDILSDFSEETITGLKALAEKHNFLIFEDRKFIDIGNTVQKQYHGGTLRISEWAHIINCSILPGEGIVEALAQTASAEDFPYGSERGLLILAEMTSKGSLATGQY 169          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_KLULA (Orotidine 5'-phosphate decarboxylase OS=Kluyveromyces lactis GN=URA3 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 5.230e-30
Identity = 71/146 (48.63%), Postives = 98/146 (67.12%), Query Frame = 1
Query:   10 KLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFTPDFGS--KLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIV---DXXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            KL ++M +K++NLC + DV +  ELL++ E +GP ICLLKTHVDIL DF+ + G+   L+A+AEK+ FLIFEDRKFADIGNTV +Q   G++ I +W+DI NAH ++G GIV                    AE+SS G+LA G++
Sbjct:   20 KLLRLMDEKKTNLCASLDVRSTDELLKLVETLGPYICLLKTHVDILDDFSYE-GTVVPLKALAEKYKFLIFEDRKFADIGNTVKLQYTSGVYRIAEWSDITNAHGVTGAGIVAGLKQGAQEVTKEPRGLLMLAELSSKGSLAHGEY 164          
BLAST of DC900174 vs. ExPASy Swiss-Prot
Match: PYRF_CANPA (Orotidine 5'-phosphate decarboxylase OS=Candida parapsilosis GN=URA3 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 5.230e-30
Identity = 67/146 (45.89%), Postives = 94/146 (64.38%), Query Frame = 1
Query:    7 RKLFQVMVKKESNLCLAADVATAAELLQIAEKVGPEICLLKTHVDILPDFT-PDFGSKLRAIAEKHNFLIFEDRKFADIGNTVTMQAEGGIFCILDWADIINAHIISGPGIV---DXXXXXXXXXXXXXXXXAEMSSAGNLAKGDF 432
            R+LF +M +K+SNLC + DV T  ELL + +K+GP ICL+KTH+DI+ DF+  +    L  +++KH F+IFEDRKFADIGNTV  Q  GG++ I  WAD+ NAH ++G G+V                    AE+SS G+LA G++
Sbjct:   20 RRLFHLMEQKQSNLCASVDVRTTKELLSLVDKLGPYICLVKTHIDIIDDFSYEETILPLLELSKKHKFMIFEDRKFADIGNTVKHQYTGGVYKIAKWADLTNAHGVTGEGVVKGLKEGAQETTDEARGLLMLAELSSKGSLAYGEY 165          
The following BLAST results are available for this feature:
BLAST of DC900174 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PYRF_KLUMA1.054e-3049.66Orotidine 5'-phosphate decarboxylase OS=Kluyveromy... [more]
PYRF_COCPO1.054e-3044.59Orotidine 5'-phosphate decarboxylase OS=Coccidioid... [more]
PYRF_CLAFU1.054e-3047.02Orotidine 5'-phosphate decarboxylase OS=Cladospori... [more]
PYRF_PICAN3.066e-3046.21Orotidine 5'-phosphate decarboxylase OS=Pichia ang... [more]
PYRF_DEBHA3.066e-3047.62Orotidine 5'-phosphate decarboxylase OS=Debaryomyc... [more]
PYRF_PENNA4.005e-3047.02Orotidine 5'-phosphate decarboxylase OS=Penicilliu... [more]
PYRF_PENCA4.005e-3046.36Orotidine 5'-phosphate decarboxylase OS=Penicilliu... [more]
PYRF_ASPOR4.005e-3046.62Orotidine 5'-phosphate decarboxylase OS=Aspergillu... [more]
PYRF_KLULA5.230e-3048.63Orotidine 5'-phosphate decarboxylase OS=Kluyveromy... [more]
PYRF_CANPA5.230e-3045.89Orotidine 5'-phosphate decarboxylase OS=Candida pa... [more]

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Properties
Property NameValue
Genbank descriptionDC900174 VSS Citrus sinensis cDNA clone VS28201 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900174 ID=DC900174; Name=DC900174; organism=Citrus sinensis; type=EST; length=450bp
ACTGGGAGAAAATTGTTTCAAGTGATGGTGAAGAAGGAGAGTAATTTGTG
TTTGGCTGCTGATGTTGCCACTGCTGCTGAGTTGCTTCAAATTGCCGAGA
AGGTTGGACCAGAGATCTGCTTGTTGAAAACCCATGTCGATATATTGCCT
GATTTCACCCCAGATTTTGGTTCCAAACTTCGTGCGATTGCAGAAAAGCA
TAACTTCCTAATTTTTGAAGATCGCAAGTTTGCGGACATTGGTAACACTG
TGACCATGCAGGCTGAAGGTGGTATATTTTGTATATTGGATTGGGCCGAT
ATAATAAATGCTCACATAATCTCTGGACCGGGAATTGTGGATGGTCTGAA
ATTAAAGGGATTGCCTCGTGGTAGGGGTCTGTTGCTGCTGGCTGAGATGA
GCTCAGCTGGTAACCTAGCAAAGGGAGACTTCAGAGCAGCTGGAAATGCG
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