DC900171

Overview
NameDC900171
Unique NameDC900171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length656
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5386 contig Csv1_Contig5386:85..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH4_RAT (Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Adh4 PE=2 SV=3)

HSP 1 Score: 193.741 bits (491), Expect = 6.932e-49
Identity = 95/221 (42.99%), Postives = 140/221 (63.35%), Query Frame = 3
Query:    3 GTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLR---INTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGA 656
            GT G+VI CKAA+AW+   PL IEE+EV+PP+ +EVR+K++ T +C TD+     K +  LFP + GHE  GIVESVG GVT+ +PGD V+P F  +CK+C  C S  +N+C  LR     T    ++ D  SRF+ K + IYHF+G S+FS+YTV     +A+++  A L++VC++ CG ++G+GA +N AK   G + A+F             +++GA
Sbjct:    2 GTQGKVITCKAAIAWKTDSPLCIEEIEVSPPKAHEVRIKVIATCVCPTDINATNPKKKA-LFPVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKKCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTSKERSIYHFMGVSSFSQYTVVSEANLARVDDEANLERVCLIGCGFTSGYGAAINTAKVTPGSACAVFGLGCVGLSAVIGCKIAGA 221          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHI_RHOS4 (Alcohol dehydrogenase class-3 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=adhI PE=3 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.634e-48
Identity = 94/213 (44.13%), Postives = 132/213 (61.97%), Query Frame = 3
Query:   21 IRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFS-IKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGA 656
            +R +AAVA EAGKPL I EV +  P+  EV ++I  T +CHTD +         +FP I GHE  G+V  VG GVT ++PGDHV+P++T EC++CP C S+++N+C  +R    +G+M  DG SRFS + G PI H++G STFS YTV     VAK+ P AP DK+C + CG++TG GA +N AK + G    +F             +++GA
Sbjct:    1 MRTRAAVAVEAGKPLEIMEVNLEGPKAGEVMVEIKATGICHTDEFTLSGADPEGMFPAILGHEGAGVVVEVGPGVTSVKPGDHVIPLYTPECRQCPSCLSQKTNLCTAIRGTQGQGLM-PDGTSRFSMLDGTPILHYMGCSTFSNYTVLPEIAVAKVRPDAPFDKICYIGCGVTTGIGAVINTAKVEIGAKAVVFGLGGIGLNVIQGLKLAGA 212          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH8_RANPE (NADP-dependent alcohol dehydrogenase OS=Rana perezi GN=ADH8 PE=1 SV=3)

HSP 1 Score: 189.504 bits (480), Expect = 1.307e-47
Identity = 99/199 (49.75%), Postives = 132/199 (66.33%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            TAG+ I CKAAVAWE  KPL +E + VAPP+ +EVR+KIL + +C +D    +    +  FP I GHEA G+VES+G GVT ++PGD V+P+F  +C  C  C S  SN C+   +    G+M  D  SRF+ +GKPIY+ VGTSTF+EYTV     VAKI+P APL+  C++ CG +TG+GA VN AK   G + A+F
Sbjct:    3 TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSK-FPVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMA-DMTSRFTCRGKPIYNLVGTSTFTEYTVVADIAVAKIDPKAPLES-CLIGCGFATGYGAAVNTAKVTPGSTCAVF 198          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHL5_ARATH (Alcohol dehydrogenase-like 5 OS=Arabidopsis thaliana GN=At4g22110 PE=2 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.707e-47
Identity = 106/220 (48.18%), Postives = 134/220 (60.91%), Query Frame = 3
Query:   12 GQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEA-KGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMC----DLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGA 656
            G+ IRCKAAV+ + G+ LVIEE+ V PPQ  EVR+KI+ TSLCHTDV F +   G    FPRI GHEA G++ES+GE V   Q GD VLPVF   C+EC  C S +SN C    D    NT R  M +  +  F   G+ IYHF+  S+FSEYTV  +  + KI+P  P+DK  +LSCG+STG GA   VA  +KG +VA+F             R+ GA
Sbjct:   12 GKPIRCKAAVSRKPGEALVIEEIHVDPPQAYEVRIKIICTSLCHTDVSFSKIDSGPLARFPRILGHEAVGVIESIGEHVNGFQQGDVVLPVFHPHCEECRDCKSSKSNWCARFADDFLSNTRRYGMTSRFKDSF---GEDIYHFLFVSSFSEYTVVDIAHLVKISPDIPVDKAALLSCGVSTGIGAAWKVANVEKGSTVAVFGLGAVGLAVGEGARLRGA 228          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH6_RAT (Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Adh6 PE=2 SV=1)

HSP 1 Score: 187.963 bits (476), Expect = 3.804e-47
Identity = 89/200 (44.50%), Postives = 132/200 (66.00%), Query Frame = 3
Query:    3 GTAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            GT G+VIRCKA V W+ G PL IEE+EVAPP+  EVR+K++ T +C TD+   + +  +   P I GHE  GIVESVGEGV+ ++ GD V+ +   +C EC  C + ++N+C  +R++     + ++G SR + KGK ++ ++   +FSEYTV     VAKI+  APL+KVC++ CG +TG+GA +N AK   G + A+F
Sbjct:    2 GTQGKVIRCKATVLWKPGAPLAIEEIEVAPPKAKEVRIKMVATGVCGTDIKHLDTQELSKFCPMIMGHEGVGIVESVGEGVSSVRTGDKVILLCIPQCGECKTCLNSKNNICTEIRLSKTH--LASEGTSRITCKGKLVHQYIALGSFSEYTVLKEISVAKIDEGAPLEKVCIIGCGFATGYGAAINSAKVTPGSTCAVF 199          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: FRMA_HAEIN (S-(hydroxymethyl)glutathione dehydrogenase OS=Haemophilus influenzae GN=frmA PE=3 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.968e-47
Identity = 89/194 (45.88%), Postives = 130/194 (67.01%), Query Frame = 3
Query:   21 IRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            I+ +AAVA+   +PL I E++V  P+K EV ++   T +CHTD +         +FP + GHE  G+V +VGEGV  ++PGDHV+P++T EC EC  C S ++N+C  +R    +G+M  D  +RFS +G+PIYH++G STFSEY+V     +AKINP A  ++VC+L CG++TG GA  N AK ++G SVA+F
Sbjct:   10 IKSRAAVAFAPNQPLQIVEIDVEMPRKGEVLIRNTHTGVCHTDAFTLSGSDPEGVFPVVLGHEGAGVVVAVGEGVLSVKPGDHVIPLYTAECGECEFCRSGKTNLCVSVRDTQGKGLM-PDCTTRFSYQGQPIYHYMGCSTFSEYSVVAEVSLAKINPEANHEQVCLLGCGVTTGIGAVHNTAKVQEGDSVAVF 202          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHL2_ARATH (Alcohol dehydrogenase-like 2 OS=Arabidopsis thaliana GN=At1g22440 PE=2 SV=1)

HSP 1 Score: 187.578 bits (475), Expect = 4.968e-47
Identity = 107/224 (47.77%), Postives = 138/224 (61.61%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEA-KGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMC-----DLLRINTDRGVMINDGQSRF-SIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGA 656
            T G+ IRCKAA+  +AG+PLVIEE++V PPQ  EVR+KIL TSLCHTDV FW+   G    FPRI GHEA G+VES+GE V   + GD VLPVF  +C+EC  C S +SN C     D L  NT R  M     SRF   +G+ I+HF+  S+F+EYTV  +  + KI+P  P+D   +LSC ++TG GA   VA  ++G +V IF             R+ GA
Sbjct:    7 TEGKPIRCKAAILRKAGEPLVIEEIQVDPPQAYEVRIKILCTSLCHTDVTFWKLDSGPLARFPRILGHEAVGVVESIGEKVDGFKQGDVVLPVFHPQCEECKECISPKSNWCTKYTNDYLS-NTRRYGM----TSRFKDSRGEDIHHFIFVSSFTEYTVVDIAHLVKISPEIPVDIAALLSCSVATGLGAAWKVADVEEGSTVVIFGLGAVGLAVAEGVRLRGA 225          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: FADH_PARDE (S-(hydroxymethyl)glutathione dehydrogenase OS=Paracoccus denitrificans GN=flhA PE=1 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 8.473e-47
Identity = 92/213 (43.19%), Postives = 130/213 (61.03%), Query Frame = 3
Query:   21 IRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFS-IKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGA 656
            +R +AAVA EAGKPL + EV +  P+  EV ++I  T +CHTD +         LFP I GHE  G+V  VG GVT ++PG+HV+P++T EC++C  C S ++N+C  +R    +G+M  DG SRFS + G PI+H++G STFS YTV     VAK+   AP DK+C + CG++TG GA +N AK + G    +F             R++GA
Sbjct:    1 MRTRAAVALEAGKPLEVMEVNLEGPKAGEVMVEIKATGICHTDEFTLSGADPEGLFPSILGHEGAGVVVEVGPGVTSVKPGNHVIPLYTPECRQCASCLSGKTNLCTAIRATQGQGLM-PDGTSRFSMLDGTPIFHYMGCSTFSNYTVLPEIAVAKVREDAPFDKICYIGCGVTTGIGAVINTAKVEIGAKAVVFGLGGIGLNVLQGLRLAGA 212          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHL1_ARATH (Alcohol dehydrogenase-like 1 OS=Arabidopsis thaliana GN=At1g22430 PE=2 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.107e-46
Identity = 100/217 (46.08%), Postives = 131/217 (60.37%), Query Frame = 3
Query:   12 GQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAK-GQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFS-IKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGA 656
            G+ I CKAA+  +AG+ LVIE++ V PPQ  EVR+KIL TSLCHTD+ FW+   G    FPRI GHEA G+VES+GE V   + GD VLPVF   C+EC  C S ++N CD    +           SRF    G+ I+HF+  S+FSEYTV  +  + KI+P  P+DK  +LSCG+STG GA   VA  ++G ++AIF             R+ GA
Sbjct:   11 GKPITCKAAICRKAGEALVIEDIHVDPPQAYEVRIKILCTSLCHTDLTFWKLSFGPISRFPRILGHEAVGVVESIGENVDGFKQGDVVLPVFHPYCEECKDCKSSKTNWCDRYAEDFISNTRRYGMASRFKDSSGEVIHHFLFVSSFSEYTVVDIAHLVKISPEIPVDKAALLSCGVSTGIGAAWKVANVEEGSTIAIFGLGAVGLAVAEGARLRGA 227          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH6_PERMA (Alcohol dehydrogenase 6 OS=Peromyscus maniculatus GN=ADH6 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.224e-45
Identity = 89/199 (44.72%), Postives = 129/199 (64.82%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            TAG+VIRCKAAV W+ G PL +EE++VAPP+  EVR+K++   +C TD+   + K   P  P I GHE  GIVESVGEGV+ ++ GD V+ +   +C EC  C + ++N+C  +R++     + ++G SR + KGK  Y ++ T TFSEY V     VAK++  A L+K C++ CG +TGFGA +N AK   G + A+F
Sbjct:    3 TAGKVIRCKAAVLWKPGAPLTMEEIDVAPPKGKEVRVKMVAAGICGTDIKSLDNKKLAPFCPIIMGHEGTGIVESVGEGVSTVKTGDKVIILCLPQCGECNTCLNSKNNICKEVRLSGTH--LTSEGNSRITCKGKTTYQYITTGTFSEYIVIKEISVAKVDEDALLEKACIIGCGFATGFGAAINSAKVSPGSTCAVF 199          
The following BLAST results are available for this feature:
BLAST of DC900171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
ADH4_RAT6.932e-4942.99Alcohol dehydrogenase 4 OS=Rattus norvegicus GN=Ad... [more]
ADHI_RHOS42.634e-4844.13Alcohol dehydrogenase class-3 OS=Rhodobacter sphae... [more]
ADH8_RANPE1.307e-4749.75NADP-dependent alcohol dehydrogenase OS=Rana perez... [more]
ADHL5_ARATH1.707e-4748.18Alcohol dehydrogenase-like 5 OS=Arabidopsis thalia... [more]
ADH6_RAT3.804e-4744.50Alcohol dehydrogenase 6 OS=Rattus norvegicus GN=Ad... [more]
FRMA_HAEIN4.968e-4745.88S-(hydroxymethyl)glutathione dehydrogenase OS=Haem... [more]
ADHL2_ARATH4.968e-4747.77Alcohol dehydrogenase-like 2 OS=Arabidopsis thalia... [more]
FADH_PARDE8.473e-4743.19S-(hydroxymethyl)glutathione dehydrogenase OS=Para... [more]
ADHL1_ARATH1.107e-4646.08Alcohol dehydrogenase-like 1 OS=Arabidopsis thalia... [more]
ADH6_PERMA1.224e-4544.72Alcohol dehydrogenase 6 OS=Peromyscus maniculatus ... [more]

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Properties
Property NameValue
Genbank descriptionDC900171 VSS Citrus sinensis cDNA clone VS27V94 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900171 ID=DC900171; Name=DC900171; organism=Citrus sinensis; type=EST; length=656bp
CTGGCACAGCTGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCATGGGAG
GCGGGGAAGCCACTGGTGATTGAAGAAGTGGAGGTGGCTCCACCACAGAA
AAATGAAGTTCGATTGAAGATCCTCTTCACCTCTTTATGCCATACTGATG
TTTACTTCTGGGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCATTTTT
GGTCACGAAGCTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTAACTGA
TCTCCAACCAGGAGACCATGTTCTTCCTGTGTTCACAGGAGAGTGCAAGG
AATGTCCTCACTGTCATTCAGAGGAAAGCAATATGTGTGACCTCCTCAGG
ATCAATACTGACAGGGGTGTTATGATTAATGATGGTCAGTCGAGATTCTC
GATTAAGGGGAAGCCAATTTACCATTTTGTGGGCACTTCTACCTTCAGTG
AATACACTGTTACCCATGTCGGTTGTGTTGCTAAGATCAATCCTGCTGCC
CCTCTTGACAAAGTTTGTGTGCTTAGCTGTGGAATCTCCACAGGTTTTGG
GGCTACTGTTAATGTCGCCAAACCGAAGAAGGGCCAGTCTGTTGCCATTT
TTGGATTGGGTGCAGNTGGCCTCGCTGCTGCCGAAGGGGCAAGGGTATCA
GGGGCT
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