DC900171

Overview
NameDC900171
Unique NameDC900171
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length656
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5386 contig Csv1_Contig5386:85..740. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSI (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. indica GN=ADHIII PE=3 SV=1)

HSP 1 Score: 276.559 bits (706), Expect = 8.131e-74
Identity = 132/199 (66.33%), Postives = 153/199 (76.88%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            T GQVI CKAAVAWEA KP+ IE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT++QPGDHV+P +  EC+EC  C S ++N+C  +R  T  GVM+ND +SRFSI GKPIYHF+GTSTFS+YTV H   VAKINP APLDKVC+L CG+STG GA  N AK + G  VAIF
Sbjct:    5 TQGQVITCKAAVAWEANKPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIF 203          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHX_ORYSJ (Alcohol dehydrogenase class-3 OS=Oryza sativa subsp. japonica GN=Os02g0815500 PE=2 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 1.811e-73
Identity = 131/199 (65.83%), Postives = 153/199 (76.88%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            T GQVI CKAAVAWEA +P+ IE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT++QPGDHV+P +  EC+EC  C S ++N+C  +R  T  GVM+ND +SRFSI GKPIYHF+GTSTFS+YTV H   VAKINP APLDKVC+L CG+STG GA  N AK + G  VAIF
Sbjct:    5 TQGQVITCKAAVAWEANRPMTIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVSTGLGAVWNTAKVEAGSIVAIF 203          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHX_MAIZE (Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH PE=2 SV=1)

HSP 1 Score: 273.092 bits (697), Expect = 8.990e-73
Identity = 131/199 (65.83%), Postives = 152/199 (76.38%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            T GQVI CKAAVA+E  KPLVIE+V+VAPPQ  EVR+KILFT+LCHTD Y W  K    LFP I GHEA GIVESVGEGVTD+QPGDHV+P +  ECKEC  C S ++N+C  +R  T  GVM+ND +SRFS+ GKPIYHF+GTSTFS+YTV H   VAKINP APLDKVC+L CG+ TG GA  N AK + G  VA+F
Sbjct:    5 TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRVKILFTALCHTDHYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTDVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRSATGVGVMMNDMKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKINPQAPLDKVCLLGCGVPTGLGAVWNTAKVESGSVVAVF 203          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHX_ARATH (Alcohol dehydrogenase class-3 OS=Arabidopsis thaliana GN=ADH2 PE=1 SV=2)

HSP 1 Score: 267.314 bits (682), Expect = 4.933e-71
Identity = 126/199 (63.32%), Postives = 152/199 (76.38%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            T GQVI CKAAVA+E  KPLVIE+V+VAPPQ  EVR+KIL+T+LCHTD Y W  K    LFP I GHEA GIVESVGEGVT++Q GDHV+P +  EC+EC  C S ++N+C  +R  T  G+M+ND +SRFS+ GKPIYHF+GTSTFS+YTV H   VAKI+P APLDKVC+L CG+ TG GA  N AK + G +VAIF
Sbjct:    3 TQGQVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIF 201          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHX_PEA (Alcohol dehydrogenase class-3 OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 1.435e-70
Identity = 129/199 (64.82%), Postives = 150/199 (75.38%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            T GQVI CKAAVAWE  KPL IE+VEVAPPQ NEVR++ILFT+LCHTD Y    K    LFP I GHEA GIVESVGEGVTD++PGDHV+P +  EC EC  C S ++N+C  +R  T  GVM+ D +SRFS+KGKPIYHF+GTSTFS+YTV H   VAKI+P APLDKVC+L CG+ TG GA  N AK + G  VAIF
Sbjct:    2 TQGQVITCKAAVAWEPNKPLTIEDVEVAPPQANEVRIQILFTALCHTDAYTLGGKDPEGLFPCILGHEAAGIVESVGEGVTDVKPGDHVIPSYQAECGECKFCKSPKTNLCGKVRAATGVGVMMADRKSRFSVKGKPIYHFMGTSTFSQYTVVHDVSVAKIHPDAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSIVAIF 200          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHL6_ARATH (Alcohol dehydrogenase-like 6 OS=Arabidopsis thaliana GN=At5g24760 PE=2 SV=2)

HSP 1 Score: 248.825 bits (634), Expect = 1.816e-65
Identity = 117/196 (59.69%), Postives = 149/196 (76.02%), Query Frame = 3
Query:   15 QVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIF 602
            QVI C AAVAW AG+PLV+EEVEV+PPQ  E+R+K++ TSLC +D+  WE++    L PRIFGHEA GIVES+GEGVT+ + GDHVL VFTGEC  C HC S +SNMC +L +   +G+M +D ++RFSIKGKP+YH+   S+FSEYTV H GC  K++P APL K+C+LSCG++ G GA  NVA  +KG SV IF
Sbjct:   12 QVITCNAAVAWRAGEPLVMEEVEVSPPQPLEIRIKVVCTSLCRSDLSAWESQS---LLPRIFGHEAAGIVESIGEGVTEFEKGDHVLAVFTGECGSCRHCISGKSNMCQVLGMER-KGLMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVQKGSSVVIF 203          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHX_RAT (Alcohol dehydrogenase class-3 OS=Rattus norvegicus GN=Adh5 PE=1 SV=2)

HSP 1 Score: 246.128 bits (627), Expect = 1.177e-64
Identity = 122/216 (56.48%), Postives = 152/216 (70.37%), Query Frame = 3
Query:    9 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGA 656
            A QVIRCKAAVAWEAGKPL IEE+EVAPPQ +EVR+KI+ T++CHTD Y          FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +G+M  DG SRF+ KGKPI HF+GTSTFSEYTV     VAKI+P+APLDKVC+L CGISTG+GA VN AK + G + A+F             +V+GA
Sbjct:    2 ANQVIRCKAAVAWEAGKPLSIEEIEVAPPQAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKPILHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGA 216          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHX_MOUSE (Alcohol dehydrogenase class-3 OS=Mus musculus GN=Adh5 PE=1 SV=3)

HSP 1 Score: 243.432 bits (620), Expect = 7.628e-64
Identity = 120/216 (55.56%), Postives = 152/216 (70.37%), Query Frame = 3
Query:    9 AGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGA 656
            A QVIRCKAAVAWEAGKPL IEE+EVAPP+ +EVR+KIL T++CHTD Y          FP I GHE  GIVESVGEGVT L+ GD V+P++  +C EC  C + ++N+C  +R+   +G+M  DG SRF+ KGK ++HF+GTSTFSEYTV     VAKI+P+APLDKVC+L CGISTG+GA VN AK + G + A+F             +V+GA
Sbjct:    2 ANQVIRCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKILATAVCHTDAYTLSGADPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLM-PDGTSRFTCKGKSVFHFMGTSTFSEYTVVADISVAKIDPSAPLDKVCLLGCGISTGYGAAVNTAKVEPGSTCAVFGLGGVGLAVIMGCKVAGA 216          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADH1_ZEALU (Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurians GN=ADH1 PE=3 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 2.454e-62
Identity = 113/146 (77.40%), Postives = 122/146 (83.56%), Query Frame = 3
Query:  219 IVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRFSIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGA 656
            I+ESVGEGVTD+ PGDHVLPVFTGECKEC HC S ESNMCDLLRINTDRGVMI DG+SRFSI GKPIYHFVGTSTFSEYTV HVGCVAKINP APLDKVCVLSCGISTG GA++NVAKP KG +VA+F             R++GA
Sbjct:    1 IIESVGEGVTDVAPGDHVLPVFTGECKECAHCKSAESNMCDLLRINTDRGVMIGDGKSRFSINGKPIYHFVGTSTFSEYTVMHVGCVAKINPQAPLDKVCVLSCGISTGLGASINVAKPPKGSTVAVFGLGAVGLAAAEGARIAGA 146          
BLAST of DC900171 vs. ExPASy Swiss-Prot
Match: ADHL4_ARATH (Alcohol dehydrogenase-like 4 OS=Arabidopsis thaliana GN=At1g64710 PE=2 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.205e-62
Identity = 116/220 (52.73%), Postives = 153/220 (69.55%), Query Frame = 3
Query:    6 TAGQVIRCKAAVAWEAGKPLVIEEVEVAPPQKNEVRLKILFTSLCHTDVYFWEAKGQTP-LFPRIFGHEAGGIVESVGEGVTDLQPGDHVLPVFTGECKECPHCHSEESNMCDLLRINTDRGVMINDGQSRF--SIKGKPIYHFVGTSTFSEYTVTHVGCVAKINPAAPLDKVCVLSCGISTGFGATVNVAKPKKGQSVAIFXXXXXXXXXXXXXRVSGA 656
            T G+VI CKAAVAW AG+PLV+E+V+V PPQ+ EVR++ILFTS+CHTD+  W+ + +    +PRI GHEA GIVESVGEGV ++  GDHVLP+FTGEC +C  C  + +N+C+  R++  + VM+ DG++RF  S   KPIYHF+ TSTFSEYTV    CV K++P  PL+K+ +LSCG+STG GA  NVA  +   +VAIF             R  GA
Sbjct:    3 TQGKVITCKAAVAWGAGEPLVMEDVKVDPPQRLEVRIRILFTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEEMMAGDHVLPIFTGECGDCRVCKRDGANLCERFRVDPMKKVMVTDGKTRFFTSKDNKPIYHFLNTSTFSEYTVIDSACVLKVDPLFPLEKISLLSCGVSTGVGAAWNVADIQPASTVAIFGLGAVGLAVAEGARARGA 222          
The following BLAST results are available for this feature:
BLAST of DC900171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 139
Match NameE-valueIdentityDescription
ADHX_ORYSI8.131e-7466.33Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_ORYSJ1.811e-7365.83Alcohol dehydrogenase class-3 OS=Oryza sativa subs... [more]
ADHX_MAIZE8.990e-7365.83Alcohol dehydrogenase class-3 OS=Zea mays GN=FDH P... [more]
ADHX_ARATH4.933e-7163.32Alcohol dehydrogenase class-3 OS=Arabidopsis thali... [more]
ADHX_PEA1.435e-7064.82Alcohol dehydrogenase class-3 OS=Pisum sativum PE=... [more]
ADHL6_ARATH1.816e-6559.69Alcohol dehydrogenase-like 6 OS=Arabidopsis thalia... [more]
ADHX_RAT1.177e-6456.48Alcohol dehydrogenase class-3 OS=Rattus norvegicus... [more]
ADHX_MOUSE7.628e-6455.56Alcohol dehydrogenase class-3 OS=Mus musculus GN=A... [more]
ADH1_ZEALU2.454e-6277.40Alcohol dehydrogenase 1 (Fragment) OS=Zea luxurian... [more]
ADHL4_ARATH3.205e-6252.73Alcohol dehydrogenase-like 4 OS=Arabidopsis thalia... [more]

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Properties
Property NameValue
Genbank descriptionDC900171 VSS Citrus sinensis cDNA clone VS27V94 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900171 ID=DC900171; Name=DC900171; organism=Citrus sinensis; type=EST; length=656bp
CTGGCACAGCTGGTCAAGTTATTCGCTGCAAAGCGGCGGTGGCATGGGAG
GCGGGGAAGCCACTGGTGATTGAAGAAGTGGAGGTGGCTCCACCACAGAA
AAATGAAGTTCGATTGAAGATCCTCTTCACCTCTTTATGCCATACTGATG
TTTACTTCTGGGAAGCCAAGGGACAAACACCTCTCTTTCCTCGCATTTTT
GGTCACGAAGCTGGAGGGATTGTAGAAAGTGTAGGGGAGGGGGTAACTGA
TCTCCAACCAGGAGACCATGTTCTTCCTGTGTTCACAGGAGAGTGCAAGG
AATGTCCTCACTGTCATTCAGAGGAAAGCAATATGTGTGACCTCCTCAGG
ATCAATACTGACAGGGGTGTTATGATTAATGATGGTCAGTCGAGATTCTC
GATTAAGGGGAAGCCAATTTACCATTTTGTGGGCACTTCTACCTTCAGTG
AATACACTGTTACCCATGTCGGTTGTGTTGCTAAGATCAATCCTGCTGCC
CCTCTTGACAAAGTTTGTGTGCTTAGCTGTGGAATCTCCACAGGTTTTGG
GGCTACTGTTAATGTCGCCAAACCGAAGAAGGGCCAGTCTGTTGCCATTT
TTGGATTGGGTGCAGNTGGCCTCGCTGCTGCCGAAGGGGCAAGGGTATCA
GGGGCT
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