CN186110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_SYMTH (30S ribosomal protein S17 OS=Symbiobacterium thermophilum GN=rpsQ PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.126e-19 Identity = 44/80 (55.00%), Postives = 59/80 (73.75%), Query Frame = -1 Query: 327 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARIY 566 K+ VG+V S+KM K+VVVAV+ L H +Y + V+RT KF AHDE+NQC +GD+VR+ +RPLSK K W V EI++ A Y Sbjct: 9 KTRVGVVTSDKMDKTVVVAVETLVQHPLYKKRVRRTKKFKAHDEHNQCKVGDKVRIMETRPLSKEKRWRVVEIIESAPDY 88
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_FERNB (30S ribosomal protein S17 OS=Fervidobacterium nodosum (strain ATCC 35602 / DSM 5306 / Rt17-B1) GN=rpsQ PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 5.126e-19 Identity = 43/79 (54.43%), Postives = 58/79 (73.42%), Query Frame = -1 Query: 330 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 566 K +VG+VVS+KM K+V V V+RL H + +YVKRT KF AHDENN C +GD V ++ SRPLSK K W V IL+++++ Sbjct: 4 KRLVGVVVSDKMDKTVTVKVERLVKHAKFGKYVKRTKKFYAHDENNACRVGDVVEIEESRPLSKLKRWVVVNILERSKL 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_PELTS (30S ribosomal protein S17 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=rpsQ PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 6.695e-19 Identity = 43/78 (55.13%), Postives = 57/78 (73.08%), Query Frame = -1 Query: 333 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 566 K++ G VVSNKM K+VVVAV+ L H +Y R ++RT KF AHDE N C IGD+V++ +RPLSK K W V EIL++ + Sbjct: 8 KTLTGRVVSNKMDKTVVVAVETLVRHPLYQRTIRRTKKFKAHDEENACRIGDKVKMMETRPLSKEKRWRVVEILERTK 85
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_VIBVY (30S ribosomal protein S17 OS=Vibrio vulnificus (strain YJ016) GN=rpsQ PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.142e-18 Identity = 40/81 (49.38%), Postives = 62/81 (76.54%), Query Frame = -1 Query: 330 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 572 ++++ +G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENN+C IGD V + RPLSK K W + ++++KA+I Sbjct: 4 KIRTQLGRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGIGDTVEIRECRPLSKTKSWTLVKVVEKAKI 84
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_VIBVU (30S ribosomal protein S17 OS=Vibrio vulnificus GN=rpsQ PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.142e-18 Identity = 40/81 (49.38%), Postives = 62/81 (76.54%), Query Frame = -1 Query: 330 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 572 ++++ +G VVS+KM KS+VVA++R+ H +Y ++VKRT+K AHDENN+C IGD V + RPLSK K W + ++++KA+I Sbjct: 4 KIRTQLGRVVSDKMDKSIVVAIERMVKHPIYGKFVKRTTKVHAHDENNECGIGDTVEIRECRPLSKTKSWTLVKVVEKAKI 84
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_THESQ (30S ribosomal protein S17 OS=Thermotoga sp. (strain RQ2) GN=rpsQ PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.142e-18 Identity = 41/76 (53.95%), Postives = 57/76 (75.00%), Query Frame = -1 Query: 339 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKK 566 K + G+VVS+KM K+VVVAV++L H +Y +YVKRT K+ AHDE N+C IGD V ++ +RPLSK K W V I+++ Sbjct: 4 KRLTGIVVSDKMDKTVVVAVEKLVQHTIYKKYVKRTKKYHAHDERNECKIGDVVEIEETRPLSKTKRWRVVRIIQR 79
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_THEP1 (30S ribosomal protein S17 OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=rpsQ PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.142e-18 Identity = 41/76 (53.95%), Postives = 57/76 (75.00%), Query Frame = -1 Query: 339 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKK 566 K + G+VVS+KM K+VVVAV++L H +Y +YVKRT K+ AHDE N+C IGD V ++ +RPLSK K W V I+++ Sbjct: 4 KRLTGIVVSDKMDKTVVVAVEKLVQHPIYKKYVKRTKKYHAHDERNECKIGDVVEIEETRPLSKTKRWRVVRIIQR 79
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_METCA (30S ribosomal protein S17 OS=Methylococcus capsulatus GN=rpsQ PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 1.142e-18 Identity = 40/79 (50.63%), Postives = 61/79 (77.22%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 +++SV G VVSNKM +++VVA++R H +Y +Y++RT+K +AHDENN+C+IGD V L SRP+SK K W + I+++A Sbjct: 7 RVRSVTGRVVSNKMDRTIVVAIERQVSHPLYGKYIRRTTKVLAHDENNECSIGDLVTLHASRPISKKKAWTLGAIVERA 85
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_THENN (30S ribosomal protein S17 OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=rpsQ PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.492e-18 Identity = 40/76 (52.63%), Postives = 58/76 (76.32%), Query Frame = -1 Query: 339 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKK 566 K ++G+VVS+KM K+VVVAV+R H +Y +Y+KRT K+ AHDE N+C +GD V ++ +RPLSK K W V +I+K+ Sbjct: 4 KRMIGVVVSDKMDKTVVVAVERHVQHPLYKKYIKRTKKYHAHDEKNECRVGDVVEIEETRPLSKTKRWRVVKIIKR 79
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_BAUCH (30S ribosomal protein S17 OS=Baumannia cicadellinicola subsp. Homalodisca coagulata GN=rpsQ PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.492e-18 Identity = 40/73 (54.79%), Postives = 54/73 (73.97%), Query Frame = -1 Query: 336 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 554 G VVSNKM KS+VVA++R+ H +Y +Y+KRT+K AHDENN CNIGD + + RP+SK K W + I++KA Sbjct: 15 GRVVSNKMDKSIVVAIERIIKHPIYGKYIKRTTKIHAHDENNACNIGDLIEIKECRPISKTKSWILIRIIEKA 87 The following BLAST results are available for this feature:
BLAST of CN186110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186110 ID=CN186110; Name=CN186110; organism=Citrus sinensis; type=EST; length=839bpback to top |