CN186110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_XYLFM (30S ribosomal protein S17 OS=Xylella fastidiosa (strain M12) GN=rpsQ PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.469e-14 Identity = 34/78 (43.59%), Postives = 54/78 (69.23%), Query Frame = -1 Query: 336 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 569 ++++ G V+SNKMQK+V V V+R H +Y +Y+KR++K AHD ++ CN GD V + P+SK K+W V EI+ ++ Sbjct: 11 LRTIKGRVISNKMQKTVTVLVERQIKHALYGKYIKRSTKIHAHDADDLCNEGDVVLMTEVAPISKTKNWRVVEIVARS 88
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_XYLFA (30S ribosomal protein S17 OS=Xylella fastidiosa GN=rpsQ PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.469e-14 Identity = 34/78 (43.59%), Postives = 54/78 (69.23%), Query Frame = -1 Query: 336 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 569 ++++ G V+SNKMQK+V V V+R H +Y +Y+KR++K AHD ++ CN GD V + P+SK K+W V EI+ ++ Sbjct: 11 LRTIKGRVISNKMQKTVTVLVERQIKHALYGKYIKRSTKLHAHDADDLCNEGDVVLMTEVAPISKTKNWRVVEIVARS 88
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_RALME (30S ribosomal protein S17 OS=Ralstonia metallidurans (strain CH34 / ATCC 43123 / DSM 2839) GN=rpsQ PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.469e-14 Identity = 35/82 (42.68%), Postives = 55/82 (67.07%), Query Frame = -1 Query: 330 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 575 S +++VG VVS+KM K+V V ++ H +Y +YV R+ K+ AHDE NQ GD+V + +RPLS+ K W V+ +++ AR+ Sbjct: 10 SLRRTLVGRVVSDKMDKTVTVLIENRVKHPLYGKYVLRSKKYHAHDEANQYKEGDKVEIQETRPLSRTKSWVVSRLVEAARV 91
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_RALEJ (30S ribosomal protein S17 OS=Ralstonia eutropha (strain JMP134) GN=rpsQ PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.469e-14 Identity = 36/82 (43.90%), Postives = 54/82 (65.85%), Query Frame = -1 Query: 330 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 575 S +++VG VVS+KM K+V V V+ H +Y +YV R+ K+ AHDE NQ GD+V + RPLS+ K W V+ +++ AR+ Sbjct: 10 SLRRTLVGRVVSDKMDKTVTVLVENRVKHPLYGKYVLRSKKYHAHDEANQYKEGDKVEIQEGRPLSRTKSWVVSRLVEAARV 91
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_RALEH (30S ribosomal protein S17 OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=rpsQ PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.469e-14 Identity = 36/82 (43.90%), Postives = 54/82 (65.85%), Query Frame = -1 Query: 330 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 575 S +++VG VVS+KM K+V V V+ H +Y +YV R+ K+ AHDE NQ GD+V + RPLS+ K W V+ +++ AR+ Sbjct: 10 SLRRTLVGRVVSDKMDKTVTVLVENRVKHPLYGKYVLRSKKYHAHDEANQYKEGDKVEIQEGRPLSRTKSWVVSRLVEAARV 91
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_PETMO (30S ribosomal protein S17 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) GN=rpsQ PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.469e-14 Identity = 35/76 (46.05%), Postives = 52/76 (68.42%), Query Frame = -1 Query: 339 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKK 566 K + G VVSN M K++ V DRL H Y+++V++T ++ AHDENN+C IGD V ++ SR LSK K + + I++K Sbjct: 4 KIITGKVVSNAMDKTITVETDRLTKHPKYHKFVRKTRRYHAHDENNECEIGDIVEIEESRKLSKTKAFVLKRIVRK 79
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_LEGPL (30S ribosomal protein S17 OS=Legionella pneumophila (strain Lens) GN=rpsQ PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.469e-14 Identity = 33/77 (42.86%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 345 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEIL 575 S ++++G VVS+KM K++VV ++R H Y + +KR +K AHDEN C +G+ V++ SRPLSK K W + E++ Sbjct: 7 SNARTMIGKVVSDKMDKTIVVMIERTVKHPKYGKIMKRRTKLHAHDENQVCRVGNTVKIRESRPLSKTKSWVLVEVI 83
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_LEGPH (30S ribosomal protein S17 OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=rpsQ PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.469e-14 Identity = 33/77 (42.86%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 345 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEIL 575 S ++++G VVS+KM K++VV ++R H Y + +KR +K AHDEN C +G+ V++ SRPLSK K W + E++ Sbjct: 7 SNARTMIGKVVSDKMDKTIVVMIERTVKHPKYGKIMKRRTKLHAHDENQVCRVGNTVKIRESRPLSKTKSWVLVEVI 83
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_LEGPC (30S ribosomal protein S17 OS=Legionella pneumophila (strain Corby) GN=rpsQ PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.469e-14 Identity = 33/77 (42.86%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 345 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEIL 575 S ++++G VVS+KM K++VV ++R H Y + +KR +K AHDEN C +G+ V++ SRPLSK K W + E++ Sbjct: 7 SNARTMIGKVVSDKMDKTIVVMIERTVKHPKYGKIMKRRTKLHAHDENQVCRVGNTVKIRESRPLSKTKSWVLVEVI 83
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_LEGPA (30S ribosomal protein S17 OS=Legionella pneumophila (strain Paris) GN=rpsQ PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 8.469e-14 Identity = 33/77 (42.86%), Postives = 52/77 (67.53%), Query Frame = -1 Query: 345 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEIL 575 S ++++G VVS+KM K++VV ++R H Y + +KR +K AHDEN C +G+ V++ SRPLSK K W + E++ Sbjct: 7 SNARTMIGKVVSDKMDKTIVVMIERTVKHPKYGKIMKRRTKLHAHDENQVCRVGNTVKIRESRPLSKTKSWVLVEVI 83 The following BLAST results are available for this feature:
BLAST of CN186110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186110 ID=CN186110; Name=CN186110; organism=Citrus sinensis; type=EST; length=839bpback to top |