CN186110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_TREDE (30S ribosomal protein S17 OS=Treponema denticola GN=rpsQ PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.203e-13 Identity = 33/78 (42.31%), Postives = 52/78 (66.67%), Query Frame = -1 Query: 333 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 566 + VG+V S+KM K++VV V HK+Y +YV + K+ AHDE N +IGD VR+ +P+SK K W + E++++A+ Sbjct: 13 REFVGIVTSDKMNKTIVVEVRTKKLHKLYKKYVSSSKKYKAHDEENTAHIGDTVRIVEHKPISKDKAWMLTEVIERAK 90
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_SYNWW (30S ribosomal protein S17 OS=Syntrophomonas wolfei subsp. wolfei (strain Goettingen) GN=rpsQ PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.203e-13 Identity = 32/75 (42.67%), Postives = 52/75 (69.33%), Query Frame = -1 Query: 333 VGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 557 +G V S+KM K++ V+V+ + H +Y + +K + K+ AHDENN+ GD V++ +RPLSK K W + EI++KA+ Sbjct: 12 IGTVSSDKMDKTITVSVETVKQHPLYKKTIKTSKKYKAHDENNEAKTGDIVKIMETRPLSKDKRWRLVEIVQKAK 86
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_MYCMM (30S ribosomal protein S17 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) GN=rpsQ PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.203e-13 Identity = 35/78 (44.87%), Postives = 52/78 (66.67%), Query Frame = -1 Query: 333 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 566 K+ +G VVS+KMQK++VV ++ H +Y + ++ T K HDE++ IGDRV L +RPLS K W + EIL+KA+ Sbjct: 42 KTRIGYVVSDKMQKTIVVELEDRVRHPLYGKIIRTTKKVKVHDEHSAAGIGDRVSLMETRPLSATKRWRLVEILEKAK 119
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_HAEDU (30S ribosomal protein S17 OS=Haemophilus ducreyi GN=rpsQ PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.203e-13 Identity = 33/79 (41.77%), Postives = 54/79 (68.35%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 ++++V G VVS+KM KS VVA++R H +Y ++++RT+K HDENN+ +GD V + RP+SK K + +++KA Sbjct: 4 KIRTVQGKVVSDKMDKSFVVAIERTVKHPLYGKFIRRTTKLHVHDENNEAKLGDVVEIQECRPVSKTKSHKLVRVVEKA 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_DEIGD (30S ribosomal protein S17 OS=Deinococcus geothermalis (strain DSM 11300) GN=rpsQ PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.203e-13 Identity = 35/78 (44.87%), Postives = 51/78 (65.38%), Query Frame = -1 Query: 333 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 566 K+ G+VVS+K K+V V V+R F H +Y + V R+ K+ AHDE N+ IGDRV + RP+SK K W V ++++ R Sbjct: 3 KTFTGVVVSDKADKTVSVKVERRFMHPLYGKVVTRSKKYAAHDEQNEYRIGDRVEIIAVRPISKTKTWKVTRLIERPR 80
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_CORU7 (30S ribosomal protein S17 OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) GN=rpsQ PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.203e-13 Identity = 35/80 (43.75%), Postives = 54/80 (67.50%), Query Frame = -1 Query: 333 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 572 Q K G VVS+KM K++VV ++ H +Y + ++R S+ AHDE +GDRVR++ +RPLSK KH+ + +I++KAR Sbjct: 13 QKKVRTGYVVSDKMAKTIVVELEDRKQHALYGKIMRRNSRVKAHDEEGLAGVGDRVRIEETRPLSKDKHFRLLDIVEKAR 92
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_BORT9 (30S ribosomal protein S17 OS=Borrelia turicatae (strain 91E135) GN=rpsQ PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.203e-13 Identity = 31/78 (39.74%), Postives = 55/78 (70.51%), Query Frame = -1 Query: 333 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 566 K ++G VVS+KM K++VV + + H +Y++Y+K + + AHDE + +GD+V++ SRP+SK K W + E+L+K++ Sbjct: 7 KELIGKVVSDKMSKTIVVEIVQRKMHPIYHKYLKVSRRVKAHDEREESKLGDKVKIIESRPISKEKRWMLVEVLEKSK 84
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_ACTPJ (30S ribosomal protein S17 OS=Actinobacillus pleuropneumoniae serotype 3 (strain JL03) GN=rpsQ PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.203e-13 Identity = 33/79 (41.77%), Postives = 54/79 (68.35%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 ++++V G VVS+KM KS VVA++R H +Y ++++RT+K HDENN+ +GD V + RP+SK K + +++KA Sbjct: 4 KIRTVQGKVVSDKMDKSFVVAIERTVKHPLYGKFIRRTTKLHVHDENNEAKLGDVVEIKECRPVSKTKSHTLVRVVEKA 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_ACTP7 (30S ribosomal protein S17 OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=rpsQ PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.203e-13 Identity = 33/79 (41.77%), Postives = 54/79 (68.35%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 ++++V G VVS+KM KS VVA++R H +Y ++++RT+K HDENN+ +GD V + RP+SK K + +++KA Sbjct: 4 KIRTVQGKVVSDKMDKSFVVAIERTVKHPLYGKFIRRTTKLHVHDENNEAKLGDVVEIKECRPVSKTKSHTLVRVVEKA 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_ACTP2 (30S ribosomal protein S17 OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=rpsQ PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 4.203e-13 Identity = 33/79 (41.77%), Postives = 54/79 (68.35%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 ++++V G VVS+KM KS VVA++R H +Y ++++RT+K HDENN+ +GD V + RP+SK K + +++KA Sbjct: 4 KIRTVQGKVVSDKMDKSFVVAIERTVKHPLYGKFIRRTTKLHVHDENNEAKLGDVVEIKECRPVSKTKSHTLVRVVEKA 82 The following BLAST results are available for this feature:
BLAST of CN186110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186110 ID=CN186110; Name=CN186110; organism=Citrus sinensis; type=EST; length=839bpback to top |