CN186110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_LACJO (30S ribosomal protein S17 OS=Lactobacillus johnsonii GN=rpsQ PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.597e-12 Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = -1 Query: 336 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 554 G VVS+KM K++ V VD +H VY + +K + K+ AHDENN+ IGD VR+ +RPLS K + + +I+KK+ Sbjct: 15 GRVVSDKMDKTITVVVDTYKNHPVYKKRIKYSKKYYAHDENNEAKIGDTVRIMETRPLSHAKRYRLTKIVKKS 87
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_LACGA (30S ribosomal protein S17 OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=rpsQ PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.597e-12 Identity = 34/73 (46.58%), Postives = 50/73 (68.49%), Query Frame = -1 Query: 336 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 554 G VVS+KM K++ V VD +H VY + +K + K+ AHDENN+ IGD VR+ +RPLS K + + +I+KK+ Sbjct: 15 GRVVSDKMDKTITVVVDTYKNHPVYKKRIKYSKKYYAHDENNEAKIGDTVRIMETRPLSHAKRYRLTKIVKKS 87
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_COXBU (30S ribosomal protein S17 OS=Coxiella burnetii GN=rpsQ PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.597e-12 Identity = 34/78 (43.59%), Postives = 53/78 (67.95%), Query Frame = -1 Query: 336 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 569 ++S++G VVSNKM +VVV V+R H Y +++KR++K AHD+ N+ IGD V + RP+SK K W + +I ++A Sbjct: 8 VRSLMGTVVSNKMNDTVVVRVERRVKHPKYGKFIKRSTKIHAHDKGNEGQIGDIVTIRECRPISKTKSWTLVKINERA 85
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_STRT2 (30S ribosomal protein S17 OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=rpsQ PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.086e-12 Identity = 35/82 (42.68%), Postives = 55/82 (67.07%), Query Frame = -1 Query: 330 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 575 +Q K++VG VVS+KM K++ V V+ +H VY + + + K+ AHDENN GD VR+ +RPLS KH+ + E++++A I Sbjct: 4 NQRKTLVGRVVSDKMDKTITVVVETKRNHPVYGKRINYSKKYKAHDENNVAKEGDIVRIMETRPLSATKHFRLVEVVEEAVI 85
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_STRT1 (30S ribosomal protein S17 OS=Streptococcus thermophilus (strain CNRZ 1066) GN=rpsQ PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.086e-12 Identity = 35/82 (42.68%), Postives = 55/82 (67.07%), Query Frame = -1 Query: 330 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 575 +Q K++VG VVS+KM K++ V V+ +H VY + + + K+ AHDENN GD VR+ +RPLS KH+ + E++++A I Sbjct: 4 NQRKTLVGRVVSDKMDKTITVVVETKRNHPVYGKRINYSKKYKAHDENNVAKEGDIVRIMETRPLSATKHFRLVEVVEEAVI 85
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_PARUW (30S ribosomal protein S17 OS=Protochlamydia amoebophila (strain UWE25) GN=rpsQ PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.086e-12 Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = -1 Query: 357 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAV 554 G+VVSNKMQK+VVV V+R F H Y + V R K+ AH+E+ IGD V++ +RPLSK K W V Sbjct: 14 GIVVSNKMQKTVVVKVERTFAHPQYGKIVTRGKKYYAHNESGDLQIGDEVKIMETRPLSKLKRWRV 79
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_LEUMM (30S ribosomal protein S17 OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=rpsQ PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.086e-12 Identity = 37/75 (49.33%), Postives = 50/75 (66.67%), Query Frame = -1 Query: 330 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 554 G VVS+KM K++ VAVD H VY + VK T KF AHDENN GD V++ +RPLS KH+ + +I+++A I Sbjct: 13 GRVVSDKMNKTITVAVDTYLTHDVYGKRVKYTKKFKAHDENNAAKQGDIVQIMETRPLSATKHFRLVKIVEEAVI 87
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_LACLM (30S ribosomal protein S17 OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=rpsQ PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.086e-12 Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = -1 Query: 330 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 572 Q K G VVS+KM K++ V V+ +H VY + + + K+ AHDENN GD VR+ +RPLSK KH+ + EI+++A I Sbjct: 5 QRKVYQGRVVSDKMDKTITVVVETKRNHPVYGKRINYSKKYKAHDENNSAKTGDIVRIMETRPLSKDKHFRLVEIVEEAVI 85
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_LACLA (30S ribosomal protein S17 OS=Lactococcus lactis subsp. lactis GN=rpsQ PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.086e-12 Identity = 36/81 (44.44%), Postives = 52/81 (64.20%), Query Frame = -1 Query: 330 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 572 Q K G VVS+KM K++ V V+ +H VY + + + K+ AHDENN GD VR+ +RPLSK KH+ + EI+++A I Sbjct: 5 QRKVYQGRVVSDKMDKTITVVVETKRNHPVYGKRINYSKKYKAHDENNSAKTGDIVRIMETRPLSKDKHFRLVEIVEEAVI 85
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_EXISA (30S ribosomal protein S17 OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=rpsQ PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.086e-12 Identity = 35/79 (44.30%), Postives = 52/79 (65.82%), Query Frame = -1 Query: 330 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 566 K G VVS+KM K++VVAV+ HK+Y + V T K+ AHDENN +GD VR+ +RPLSK K + + +++++ I Sbjct: 7 KVFTGRVVSDKMDKTIVVAVETKVRHKLYGKRVNYTKKYKAHDENNVAKVGDIVRIAETRPLSKDKRFRLVTVVEESVI 85 The following BLAST results are available for this feature:
BLAST of CN186110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186110 ID=CN186110; Name=CN186110; organism=Citrus sinensis; type=EST; length=839bpback to top |