CN186110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_CORA7 (30S ribosomal protein S17 OS=Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CN-1) GN=rpsQ PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.086e-12 Identity = 34/78 (43.59%), Postives = 52/78 (66.67%), Query Frame = -1 Query: 333 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 566 K+ G+VVS+KM K++VV ++ H +Y + ++ K AHDEN IGDRV + +RPLSK KH+ + EI++KA+ Sbjct: 16 KTRTGIVVSDKMNKTIVVELEDRKQHALYGKIMRTNKKVKAHDENETAGIGDRVLIAETRPLSKDKHFRLVEIVEKAK 93
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_BORBZ (30S ribosomal protein S17 OS=Borrelia burgdorferi (strain ZS7) GN=rpsQ PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.086e-12 Identity = 31/78 (39.74%), Postives = 53/78 (67.95%), Query Frame = -1 Query: 333 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 566 K ++G VVS+KM K++VV + + H +Y++Y+K + K AHDE +GD+V++ RP+SK K W++ E+L+K + Sbjct: 7 KELIGKVVSDKMSKTIVVEIVQRKMHPIYHKYLKVSKKVKAHDEKEVSKVGDKVKIIEVRPISKDKRWSLVEVLEKLK 84
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_BORBU (30S ribosomal protein S17 OS=Borrelia burgdorferi GN=rpsQ PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.086e-12 Identity = 31/78 (39.74%), Postives = 53/78 (67.95%), Query Frame = -1 Query: 333 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 566 K ++G VVS+KM K++VV + + H +Y++Y+K + K AHDE +GD+V++ RP+SK K W++ E+L+K + Sbjct: 7 KELIGKVVSDKMSKTIVVEIVQRKMHPIYHKYLKVSKKVKAHDEKEVSKVGDKVKIIEVRPISKDKRWSLVEVLEKLK 84
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_BORAP (30S ribosomal protein S17 OS=Borrelia afzelii (strain PKo) GN=rpsQ PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.086e-12 Identity = 31/78 (39.74%), Postives = 53/78 (67.95%), Query Frame = -1 Query: 333 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 566 K ++G VVS+KM K++VV + + H +Y++Y+K + K AHDE +GD+V++ RP+SK K W++ E+L+K + Sbjct: 7 KELIGRVVSDKMSKTIVVEIVQRKMHPIYHKYLKVSKKVKAHDEKEVSKVGDKVKIIEVRPISKDKRWSLVEVLEKLK 84
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_POLNA (30S ribosomal protein S17 OS=Polaromonas naphthalenivorans (strain CJ2) GN=rpsQ PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.725e-12 Identity = 33/84 (39.29%), Postives = 54/84 (64.29%), Query Frame = -1 Query: 330 RPSQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 581 + S ++++G VVS+K K+V V V+R H++Y + V +SK+ AHDE + GD + + SRP+SK K+W V +++KA I Sbjct: 5 KKSLKRTLIGKVVSDKRAKTVTVLVERRVKHELYGKIVSLSSKYHAHDEKGEFKTGDVIEITESRPISKTKNWVVTRLVQKAEI 88
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_NITWN (30S ribosomal protein S17 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rpsQ PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.725e-12 Identity = 32/70 (45.71%), Postives = 49/70 (70.00%), Query Frame = -1 Query: 357 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAV 566 +++ G+VVS+K K+VVV VDR F H +Y + ++R+ + AHDENN+ GD V ++ S+P+SK K W V Sbjct: 4 RTLQGVVVSDKQAKTVVVRVDRRFTHPIYKKTIRRSKNYHAHDENNEFKPGDMVWIEESKPISKLKRWTV 73
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_LAWIP (30S ribosomal protein S17 OS=Lawsonia intracellularis (strain PHE/MN1-00) GN=rpsQ PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.725e-12 Identity = 32/84 (38.10%), Postives = 54/84 (64.29%), Query Frame = -1 Query: 336 VIRPSQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 587 +I + +VG V+S+K K+++V V+ L H + ++++ KF AHD N+C+IGD V++ RPLS++K W + IL+KA Sbjct: 4 IIAKCNGRVLVGTVISDKNDKTIIVHVETLVKHPLLKKFIRHRKKFTAHDPLNECSIGDTVKIIEFRPLSRNKRWHLVAILEKA 87
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_DEHE1 (30S ribosomal protein S17 OS=Dehalococcoides ethenogenes (strain 195) GN=rpsQ PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.725e-12 Identity = 30/79 (37.97%), Postives = 51/79 (64.56%), Query Frame = -1 Query: 330 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 566 K+ +G V+S++M+K++VV +D H +Y + +RT K++ HDE N+ IGD + + RP+SK K+W + I+ K I Sbjct: 5 KTRIGHVISDRMEKTIVVGIDVAKRHPLYKKTYRRTMKYLVHDEKNEAKIGDMIEIVKCRPISKGKYWRLNRIITKGHI 83
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_RHOPS (30S ribosomal protein S17 OS=Rhodopseudomonas palustris (strain BisB5) GN=rpsQ PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.558e-12 Identity = 32/70 (45.71%), Postives = 50/70 (71.43%), Query Frame = -1 Query: 357 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAV 566 +++ G+VVS+K K+VVV VDR F H +Y + ++R+ + AHDEN+Q + GD V ++ S+P+SK K W V Sbjct: 4 RTLQGVVVSDKQAKTVVVRVDRRFTHPIYKKTIRRSKNYHAHDENDQFHPGDMVWIEESKPISKLKRWTV 73
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_RHOP2 (30S ribosomal protein S17 OS=Rhodopseudomonas palustris (strain HaA2) GN=rpsQ PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.558e-12 Identity = 32/70 (45.71%), Postives = 50/70 (71.43%), Query Frame = -1 Query: 357 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAV 566 +++ G+VVS+K K+VVV VDR F H +Y + ++R+ + AHDEN+Q + GD V ++ S+P+SK K W V Sbjct: 4 RTLQGVVVSDKQAKTVVVRVDRRFTHPIYKKTIRRSKNYHAHDENDQFHPGDMVWIEESKPISKLKRWTV 73 The following BLAST results are available for this feature:
BLAST of CN186110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186110 ID=CN186110; Name=CN186110; organism=Citrus sinensis; type=EST; length=839bpback to top |