CN186110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_FRATH (30S ribosomal protein S17 OS=Francisella tularensis subsp. holarctica (strain LVS) GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.035e-11 Identity = 30/74 (40.54%), Postives = 47/74 (63.51%), Query Frame = -1 Query: 333 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 554 G V S M K+VVV +R H +Y ++VK+T+K+ HDENN+C GD ++ +RP SK K W + +I+ + + Sbjct: 10 GKVSSVAMDKTVVVRAERYVKHPLYGKFVKKTTKYYVHDENNECKEGDVIKFKETRPYSKTKKWCLVDIIHREK 83
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_FRATF (30S ribosomal protein S17 OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.035e-11 Identity = 30/74 (40.54%), Postives = 47/74 (63.51%), Query Frame = -1 Query: 333 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 554 G V S M K+VVV +R H +Y ++VK+T+K+ HDENN+C GD ++ +RP SK K W + +I+ + + Sbjct: 10 GKVSSVAMDKTVVVRAERYVKHPLYGKFVKKTTKYYVHDENNECKEGDVIKFKETRPYSKTKKWCLVDIIHREK 83
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_BRASO (30S ribosomal protein S17 OS=Bradyrhizobium sp. (strain ORS278) GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.035e-11 Identity = 31/70 (44.29%), Postives = 49/70 (70.00%), Query Frame = -1 Query: 357 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAV 566 +++ G+VVS+K K+VVV VDR F H +Y + ++R+ + AHDE+N+ GD V ++ S+P+SK K W V Sbjct: 4 RTLQGVVVSDKQAKTVVVRVDRRFTHPIYKKTIRRSKNYHAHDESNEFKPGDMVWIEESKPISKLKRWTV 73
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_BRASB (30S ribosomal protein S17 OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.035e-11 Identity = 31/70 (44.29%), Postives = 49/70 (70.00%), Query Frame = -1 Query: 357 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAV 566 +++ G+VVS+K K+VVV VDR F H +Y + ++R+ + AHDE+N+ GD V ++ S+P+SK K W V Sbjct: 4 RTLQGVVVSDKQAKTVVVRVDRRFTHPIYKKTIRRSKNYHAHDESNEFKPGDMVWIEESKPISKLKRWTV 73
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_BACST (30S ribosomal protein S17 OS=Bacillus stearothermophilus GN=rpsQ PE=1 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.035e-11 Identity = 34/80 (42.50%), Postives = 53/80 (66.25%), Query Frame = -1 Query: 336 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 575 +Q K VG VVS+KM K++ V V+ H +Y + VK + K+ AHDE+N+ +GD V++ +RPLS K + + EI++KA Sbjct: 5 NQRKVYVGRVVSDKMDKTITVLVETYKKHPLYGKRVKYSKKYKAHDEHNEAKVGDIVKIMETRPLSATKRFRLVEIVEKA 84
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_AGRT5 (30S ribosomal protein S17 OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.035e-11 Identity = 32/66 (48.48%), Postives = 46/66 (69.70%), Query Frame = -1 Query: 357 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAV 554 G+VVS+K +K+VVV V+R F H + + V+R+ K+ AHDENNQ +GD V ++ P+SK K W V Sbjct: 8 GVVVSDKNEKTVVVRVERRFAHPLMQKTVRRSKKYKAHDENNQYKVGDVVSIEECAPISKDKRWTV 73
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RR17_CYAPA (Cyanelle 30S ribosomal protein S17 OS=Cyanophora paradoxa GN=rps17 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.035e-11 Identity = 28/74 (37.84%), Postives = 48/74 (64.86%), Query Frame = -1 Query: 345 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEIL 566 K VG+V+ N +K+V+VAV+ H Y++ + RT K+ HD ++ C +GD V++ +P+SK K W ++E+L Sbjct: 4 KERVGVVIRNPQEKTVIVAVNNRVRHNKYSKIIIRTKKYQVHDHSHICKLGDEVKISEVKPISKTKRWIISEVL 77
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_RHIME (30S ribosomal protein S17 OS=Rhizobium meliloti GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.352e-11 Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = -1 Query: 357 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAV 554 G VVS+K K+VVV V+R F H + + V+R+ K+ AHDENNQ +GD V ++ P+SK K W V Sbjct: 8 GTVVSDKNDKTVVVRVERRFAHPILQKTVRRSKKYKAHDENNQFKVGDLVSIEECAPISKDKRWTV 73
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_RHILW (30S ribosomal protein S17 OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.352e-11 Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = -1 Query: 357 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAV 554 G+VV +K +K+VVV V+R F H + + V+R+ K+ AHDENNQ IGD V ++ P+SK K W V Sbjct: 8 GVVVGDKNEKTVVVRVERRFAHPLLQKTVRRSKKYKAHDENNQYKIGDTVSIEECAPISKDKRWTV 73
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_RHILO (30S ribosomal protein S17 OS=Rhizobium loti GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.352e-11 Identity = 33/66 (50.00%), Postives = 45/66 (68.18%), Query Frame = -1 Query: 357 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAV 554 G VVS+K +K+VVV V+R F H V + V+ T K+ AHDENN +GD+V + S+P+SK K W V Sbjct: 8 GTVVSDKNEKTVVVKVERRFTHPVMKKTVRMTKKYKAHDENNAHKVGDQVFIQESKPISKDKRWIV 73 The following BLAST results are available for this feature:
BLAST of CN186110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186110 ID=CN186110; Name=CN186110; organism=Citrus sinensis; type=EST; length=839bpback to top |