CN186110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_RHIL3 (30S ribosomal protein S17 OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.352e-11 Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = -1 Query: 357 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAV 554 G+VV +K +K+VVV V+R F H + + V+R+ K+ AHDENNQ IGD V ++ P+SK K W V Sbjct: 8 GVVVGDKNEKTVVVRVERRFAHPLLQKTVRRSKKYKAHDENNQYKIGDTVSIEECAPISKDKRWTV 73
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_RHIE6 (30S ribosomal protein S17 OS=Rhizobium etli (strain CIAT 652) GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.352e-11 Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = -1 Query: 357 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAV 554 G+VV +K +K+VVV V+R F H + + V+R+ K+ AHDENNQ IGD V ++ P+SK K W V Sbjct: 8 GVVVGDKNEKTVVVRVERRFAHPLLQKTVRRSKKYKAHDENNQYKIGDTVSIEECAPISKDKRWTV 73
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_CORGL (30S ribosomal protein S17 OS=Corynebacterium glutamicum GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.352e-11 Identity = 35/81 (43.21%), Postives = 52/81 (64.20%), Query Frame = -1 Query: 333 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 575 S K G VVS+KMQK++VV V+ H +Y + ++ K AHDE IGD VR++ +RPLSK K++ + EI++KA+ Sbjct: 12 STRKVRTGYVVSDKMQKTIVVEVEDRKQHALYGKILRSAKKVKAHDEEQIAGIGDLVRIEETRPLSKDKNYRLIEIVEKAK 92
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_CORGB (30S ribosomal protein S17 OS=Corynebacterium glutamicum (strain R) GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.352e-11 Identity = 35/81 (43.21%), Postives = 52/81 (64.20%), Query Frame = -1 Query: 333 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 575 S K G VVS+KMQK++VV V+ H +Y + ++ K AHDE IGD VR++ +RPLSK K++ + EI++KA+ Sbjct: 12 STRKVRTGYVVSDKMQKTIVVEVEDRKQHALYGKILRSAKKVKAHDEEQIAGIGDLVRIEETRPLSKDKNYRLIEIVEKAK 92
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_BIFLO (30S ribosomal protein S17 OS=Bifidobacterium longum GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.352e-11 Identity = 32/74 (43.24%), Postives = 50/74 (67.57%), Query Frame = -1 Query: 333 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 554 G VVS+KM K++ V +++ H +Y + V+ TSK AHDE+N +IGD V + +RPLSK K W + I+++A+ Sbjct: 13 GYVVSDKMDKTITVELEQRSTHPLYGKVVRSTSKVKAHDEHNDAHIGDLVSIMETRPLSKTKRWRLESIIERAK 86
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_BIFLI (30S ribosomal protein S17 OS=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / NCTC 11817 / S12) GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.352e-11 Identity = 32/74 (43.24%), Postives = 50/74 (67.57%), Query Frame = -1 Query: 333 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 554 G VVS+KM K++ V +++ H +Y + V+ TSK AHDE+N +IGD V + +RPLSK K W + I+++A+ Sbjct: 13 GYVVSDKMDKTITVELEQRSTHPLYGKVVRSTSKVKAHDEHNDAHIGDLVSIMETRPLSKTKRWRLESIIERAK 86
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_BIFLD (30S ribosomal protein S17 OS=Bifidobacterium longum (strain DJO10A) GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.352e-11 Identity = 32/74 (43.24%), Postives = 50/74 (67.57%), Query Frame = -1 Query: 333 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 554 G VVS+KM K++ V +++ H +Y + V+ TSK AHDE+N +IGD V + +RPLSK K W + I+++A+ Sbjct: 13 GYVVSDKMDKTITVELEQRSTHPLYGKVVRSTSKVKAHDEHNDAHIGDLVSIMETRPLSKTKRWRLESIIERAK 86
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_STRU0 (30S ribosomal protein S17 OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.766e-11 Identity = 34/82 (41.46%), Postives = 54/82 (65.85%), Query Frame = -1 Query: 330 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 575 +Q +++VG VVS+KM K++ V V+ +H VY + + + K+ AHDE N GD VR+ +RPLS KH+ + E+L++A I Sbjct: 4 NQRRTLVGRVVSDKMDKTITVIVETKRNHPVYGKRINYSKKYKAHDEKNIAKEGDIVRIMETRPLSATKHFRLVEVLEEAVI 85
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_STRTD (30S ribosomal protein S17 OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.766e-11 Identity = 34/82 (41.46%), Postives = 54/82 (65.85%), Query Frame = -1 Query: 330 SQMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKARI 575 +Q K++VG VVS+KM K++ V V+ +H VY + + + K+ AHDENN GD VR+ +RPLS K + + E++++A I Sbjct: 4 NQRKTLVGRVVSDKMDKTITVVVETKRNHPVYGKRINYSKKYKAHDENNVAKEGDIVRIMETRPLSATKRFRLVEVVEEAVI 85
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_RHISN (30S ribosomal protein S17 OS=Rhizobium sp. (strain NGR234) GN=rpsQ PE=3 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.766e-11 Identity = 32/66 (48.48%), Postives = 44/66 (66.67%), Query Frame = -1 Query: 357 GLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAV 554 G VVS+K K+VVV V+R F H + + V+R+ K+ AHDENNQ +GD V ++ P+SK K W V Sbjct: 8 GTVVSDKNDKTVVVKVERRFAHPILQKTVRRSKKYKAHDENNQYKVGDVVSIEECAPISKDKRWTV 73 The following BLAST results are available for this feature:
BLAST of CN186110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186110 ID=CN186110; Name=CN186110; organism=Citrus sinensis; type=EST; length=839bpback to top |