CN186110
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_CLOCE (30S ribosomal protein S17 OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=rpsQ PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.154e-17 Identity = 41/78 (52.56%), Postives = 57/78 (73.08%), Query Frame = -1 Query: 333 KSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 566 K+ VG VVSNKM K++VVA++ H +Y + VKRT K AHDE NQC IGD+V++ +RPLSK K W + +I++KA+ Sbjct: 8 KTRVGKVVSNKMDKTIVVAIETSVKHPLYGKIVKRTYKLKAHDEENQCQIGDKVKVMETRPLSKEKRWRLVQIVEKAQ 85
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_ANAVT (30S ribosomal protein S17 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rpsQ PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.154e-17 Identity = 42/75 (56.00%), Postives = 56/75 (74.67%), Query Frame = -1 Query: 345 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEIL 569 +K VGLVVS+KMQK+VVVA++ H Y + V +T ++ AHDE+N+C +GDRVR+ +RPLSK K W VAEIL Sbjct: 3 IKERVGLVVSDKMQKTVVVAIENRAPHPKYGKIVVKTRRYKAHDEDNKCKVGDRVRIQETRPLSKTKRWQVAEIL 77
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_ANASP (30S ribosomal protein S17 OS=Anabaena sp. (strain PCC 7120) GN=rpsQ PE=3 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.154e-17 Identity = 42/75 (56.00%), Postives = 56/75 (74.67%), Query Frame = -1 Query: 345 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEIL 569 +K VGLVVS+KMQK+VVVA++ H Y + V +T ++ AHDE+N+C +GDRVR+ +RPLSK K W VAEIL Sbjct: 3 IKERVGLVVSDKMQKTVVVAIENRAPHPKYGKIVVKTRRYKAHDEDNKCKVGDRVRIQETRPLSKTKRWQVAEIL 77
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_SHESW (30S ribosomal protein S17 OS=Shewanella sp. (strain W3-18-1) GN=rpsQ PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.813e-17 Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 +++++ G V SNKM KS+ VA++R H +Y +Y+KRT+K AHDE NQCN GD V + RPLSK K W + E++ KA Sbjct: 4 KIRTLQGRVTSNKMDKSITVAIERQVKHPIYGKYIKRTTKIHAHDETNQCNEGDLVAIRECRPLSKTKSWTLVEVVSKA 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_SHEPC (30S ribosomal protein S17 OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=rpsQ PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.813e-17 Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 +++++ G V SNKM KS+ VA++R H +Y +Y+KRT+K AHDE NQCN GD V + RPLSK K W + E++ KA Sbjct: 4 KIRTLQGRVTSNKMDKSITVAIERQVKHPIYGKYIKRTTKIHAHDETNQCNEGDLVAIRECRPLSKTKSWTLVEVVSKA 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_SHEB9 (30S ribosomal protein S17 OS=Shewanella baltica (strain OS195) GN=rpsQ PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.813e-17 Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 +++++ G V SNKM KS+ VA++R H +Y +Y+KRT+K AHDE NQCN GD V + RPLSK K W + E++ KA Sbjct: 4 KIRTLQGRVTSNKMDKSITVAIERQVKHPIYGKYIKRTTKIHAHDETNQCNEGDLVAIRECRPLSKTKSWTLVEVVSKA 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_SHEB8 (30S ribosomal protein S17 OS=Shewanella baltica (strain OS185) GN=rpsQ PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.813e-17 Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 +++++ G V SNKM KS+ VA++R H +Y +Y+KRT+K AHDE NQCN GD V + RPLSK K W + E++ KA Sbjct: 4 KIRTLQGRVTSNKMDKSITVAIERQVKHPIYGKYIKRTTKIHAHDETNQCNEGDLVAIRECRPLSKTKSWTLVEVVSKA 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_SHEB5 (30S ribosomal protein S17 OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=rpsQ PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.813e-17 Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 +++++ G V SNKM KS+ VA++R H +Y +Y+KRT+K AHDE NQCN GD V + RPLSK K W + E++ KA Sbjct: 4 KIRTLQGRVTSNKMDKSITVAIERQVKHPIYGKYIKRTTKIHAHDETNQCNEGDLVAIRECRPLSKTKSWTLVEVVSKA 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_SHEB2 (30S ribosomal protein S17 OS=Shewanella baltica (strain OS223) GN=rpsQ PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.813e-17 Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = -1 Query: 336 QMKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKA 572 +++++ G V SNKM KS+ VA++R H +Y +Y+KRT+K AHDE NQCN GD V + RPLSK K W + E++ KA Sbjct: 4 KIRTLQGRVTSNKMDKSITVAIERQVKHPIYGKYIKRTTKIHAHDETNQCNEGDLVAIRECRPLSKTKSWTLVEVVSKA 82
BLAST of CN186110 vs. ExPASy Swiss-Prot
Match: RS17_PROMA (30S ribosomal protein S17 OS=Prochlorococcus marinus GN=rpsQ PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.813e-17 Identity = 40/79 (50.63%), Postives = 56/79 (70.89%), Query Frame = -1 Query: 333 MKSVVGLVVSNKMQKSVVVAVDRLFHHKVYNRYVKRTSKFMAHDENNQCNIGDRVRLDPSRPLSKHKHWAVAEILKKAR 569 +K +G VVS+KM K+VVVAV F H +Y + V RT+++ AHDE N C +GDRVR+ +RPLS K W+VAE+L+ + Sbjct: 3 LKERLGTVVSDKMDKTVVVAVVNRFPHSIYQKTVSRTTRYKAHDEENNCKVGDRVRITETRPLSATKRWSVAEVLRTTK 81 The following BLAST results are available for this feature:
BLAST of CN186110 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186110 ID=CN186110; Name=CN186110; organism=Citrus sinensis; type=EST; length=839bpback to top |