CN186103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL17A_SCHPO (60S ribosomal protein L17-A OS=Schizosaccharomyces pombe GN=rpl17a PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 5.685e-34 Identity = 72/112 (64.29%), Postives = 84/112 (75.00%), Query Frame = -3 Query: 385 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 720 L KA +L++V HKQA+PF RF GGVGRTAQ K Q RWPVKS KF DLLKNAE+NAE KGLD+D L I H+QVN A KQRRRTYRAHGR+ Y+SSP HIE+ ++ Sbjct: 41 LKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVT-QARWPVKSVKFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVA 151
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL17_DICDI (60S ribosomal protein L17 OS=Dictyostelium discoideum GN=rpl17 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.697e-34 Identity = 71/112 (63.39%), Postives = 87/112 (77.68%), Query Frame = -3 Query: 385 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 720 LT+AK YL +V+AH++ IPF RF GGVGRT QAK QGRWP KS + IL LL+NAE+NAE KGL+V+ L I+H+QV +AQ+QRRRTYRAHGRINPYM SP +E L+ Sbjct: 43 LTRAKAYLNNVLAHRECIPFRRFKGGVGRTGQAKI-FGTSQGRWPKKSVEHILSLLQNAEANAEAKGLNVEKLKIAHVQVQRAQQQRRRTYRAHGRINPYMCSPSTVEFILT 153
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL17_YARLI (60S ribosomal protein L17 OS=Yarrowia lipolytica GN=RPL17 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.266e-33 Identity = 77/133 (57.89%), Postives = 89/133 (66.92%), Query Frame = -3 Query: 322 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLSXXXXXXXXXXETQLATSKSKK 720 L KA YL+ V HK+AIPF + G +GRT Q K + RWPVKS KF+ DLL+NA++NAE KGLD + L ISHIQVNQA KQRRRTYRAHGRIN Y SSP HIEL LS ET LA S++ Sbjct: 41 LQKALAYLDQVTDHKRAIPFRKHAGSIGRTGQGKEFGVT-KARWPVKSIKFVQDLLQNAQANAETKGLDKETLVISHIQVNQAPKQRRRTYRAHGRINAYQSSPSHIELILSEPAEEIAKAKETSLAHISSRQ 172
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL17A_YEAST (60S ribosomal protein L17-A OS=Saccharomyces cerevisiae GN=RPL17A PE=1 SV=4) HSP 1 Score: 142.895 bits (359), Expect = 1.654e-33 Identity = 71/112 (63.39%), Postives = 84/112 (75.00%), Query Frame = -3 Query: 385 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 720 LTKA++YLE V+ H++AIPF RF +GRTAQ K + RWP KS KF+ LL+NA +NAE KGLD LY+SHIQVNQA KQRRRTYRAHGRIN Y SSP HIEL ++ Sbjct: 41 LTKAQKYLEQVLDHQRAIPFRRFNSSIGRTAQGKEFGVT-KARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVT 151
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL17B_SCHPO (60S ribosomal protein L17-B OS=Schizosaccharomyces pombe GN=rpl17b PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.160e-33 Identity = 71/112 (63.39%), Postives = 83/112 (74.11%), Query Frame = -3 Query: 385 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 720 L KA +L++V HKQA+PF RF GGVGRTAQ K Q RWPVKS F DLLKNAE+NAE KGLD+D L I H+QVN A KQRRRTYRAHGR+ Y+SSP HIE+ ++ Sbjct: 41 LKKAFIFLDNVKEHKQAVPFRRFNGGVGRTAQGKEFGVT-QARWPVKSVNFFYDLLKNAEANAEAKGLDMDKLIIKHVQVNAAPKQRRRTYRAHGRVTAYLSSPSHIEIIVA 151
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL17_DIACI (60S ribosomal protein L17 OS=Diaphorina citri GN=RpL17 PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.821e-33 Identity = 71/112 (63.39%), Postives = 86/112 (76.79%), Query Frame = -3 Query: 385 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 720 L +A ++L++V + +PF R+ GGVGR AQAK + QGRWP KSA F+L LLKNAESNA+ +GLD D L I HIQVN+A + RRRTYRAHGRINPYMSSPCHIE+ LS Sbjct: 41 LRRAIKFLKNVKDQLECVPFRRYNGGVGRCAQAK-QWGTTQGRWPRKSADFLLQLLKNAESNADYRGLDTDRLVIEHIQVNRAPRLRRRTYRAHGRINPYMSSPCHIEVILS 151
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL17B_YEAST (60S ribosomal protein L17-B OS=Saccharomyces cerevisiae GN=RPL17B PE=1 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 3.685e-33 Identity = 70/112 (62.50%), Postives = 84/112 (75.00%), Query Frame = -3 Query: 385 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 720 LTKA++YL+ V+ H++AIPF RF +GRTAQ K + RWP KS KF+ LL+NA +NAE KGLD LY+SHIQVNQA KQRRRTYRAHGRIN Y SSP HIEL ++ Sbjct: 41 LTKAQKYLDQVLDHQRAIPFRRFNSSIGRTAQGKEFGVT-KARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVT 151
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL17_ASPFU (60S ribosomal protein L17 OS=Aspergillus fumigatus GN=rpl17 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.285e-33 Identity = 68/112 (60.71%), Postives = 85/112 (75.89%), Query Frame = -3 Query: 385 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 720 L +A +LE+V + +PF R+ G +GRTAQ K + + RWPVKSA+F+LDLLKNAE+NA+ KGLD L + HIQVNQA K RRRTYRAHGRINPYM++PCHIEL L+ Sbjct: 48 LQRALAFLENVKNKTEVVPFRRYAGSIGRTAQGKQWGVS-KARWPVKSAQFLLDLLKNAEANADTKGLDTGNLIVKHIQVNQAPKGRRRTYRAHGRINPYMTNPCHIELILT 158
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL17_DEBHA (60S ribosomal protein L17 OS=Debaryomyces hansenii GN=RPL17 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.829e-32 Identity = 68/112 (60.71%), Postives = 82/112 (73.21%), Query Frame = -3 Query: 385 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 720 L +A++YL+ V+ H++AIPF RF +GRT Q K + RWP KS FI DLL+N ++NAE KGLD L +SHIQVNQA KQRRRTYRAHGRIN Y SSPCHIEL L+ Sbjct: 41 LERAQKYLDQVLDHQRAIPFRRFNSSIGRTGQGKEFGVT-KARWPAKSVNFIKDLLRNGQANAESKGLDASKLKVSHIQVNQAPKQRRRTYRAHGRINAYQSSPCHIELILT 151
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL17_THEPA (60S ribosomal protein L17 OS=Theileria parva GN=RPL17 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.321e-32 Identity = 67/106 (63.21%), Postives = 81/106 (76.42%), Query Frame = -3 Query: 394 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 711 AKRYL DV+ K+ +PF +F GGVGR AQAK + QGRWP KS KF+LDLLKN ESNAEVKGL+ L + H+QVN+A RRR+YRAHGRI P++S PCH+EL Sbjct: 44 AKRYLNDVIERKRCVPFRKFRGGVGRCAQAK-AFKHTQGRWPEKSCKFLLDLLKNLESNAEVKGLEQSKLRLEHVQVNRAPVGRRRSYRAHGRIIPFLSHPCHVEL 148 The following BLAST results are available for this feature:
BLAST of CN186103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186103 ID=CN186103; Name=CN186103; organism=Citrus sinensis; type=EST; length=722bpback to top |