CN186103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL17_THEAN (60S ribosomal protein L17 OS=Theileria annulata GN=RPL17 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.949e-32 Identity = 67/106 (63.21%), Postives = 81/106 (76.42%), Query Frame = -3 Query: 394 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 711 AKRYL DV+ K+ +PF +F GGVGR AQAK + QGRWP KS KF+LDLLKN ESNAEVKGL+ L + H+QVN+A RRR+YRAHGRI P++S PCH+EL Sbjct: 44 AKRYLNDVIDRKRCVPFRKFRGGVGRCAQAK-AFKHTQGRWPEKSCKFLLDLLKNLESNAEVKGLEQSKLRLEHVQVNRAPVGRRRSYRAHGRIIPFLSHPCHVEL 148
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_IGNH4 (50S ribosomal protein L22P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rpl22p PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16 Identity = 45/109 (41.28%), Postives = 65/109 (59.63%), Query Frame = -3 Query: 394 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 720 LT+AK YLE V+ ++ +P+ R+ G V ++H GR+PVK+AK+ L LLKN E+NAE KGL+V+ L I HI ++ +R RA GR P H+E+ Sbjct: 45 LTEAKAYLERVIKMEEPVPYRRYHGKVAHKRGLADKHGIPMGRYPVKAAKYFLKLLKNVEANAEFKGLEVEKLKIVHIASHKGMTIKRWMPRAFGRATPEFERRTHLEV 153
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_METBF (50S ribosomal protein L22P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl22p PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.653e-15 Identity = 46/110 (41.82%), Postives = 67/110 (60.91%), Query Frame = -3 Query: 385 KAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 714 +A+++LEDV+A KQA+PF R G G + P GR+PV ++K IL +L+NAESNAE KGL+ +YI+H + + + R RA GR P + +IE+ LS Sbjct: 44 EARKFLEDVIALKQAVPFKRHHDGSGH-----RKGPMAAGRYPVSASKEILKILRNAESNAEYKGLEPANMYITHAAIQRGRVIRGFMPRARGRATPKDTETVNIEMILS 148
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_METS3 (50S ribosomal protein L22P OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=rpl22p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15 Identity = 45/111 (40.54%), Postives = 68/111 (61.26%), Query Frame = -3 Query: 388 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 720 +TKAK YLEDV+ K+++PF R VG K + GR+PVK+A+ +L +L+NAE+NAE KG+D + L+I HI ++ RA GR+ P+ + HI++ L Sbjct: 43 VTKAKNYLEDVIDMKKSVPFKRHNRQVGHR---KGQEGWAAGRYPVKAAEQVLKVLENAEANAEYKGMDTENLFIEHISSHRGVVLPGVIPRAFGRMTPFNTPTTHIQIVL 150
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_METMA (50S ribosomal protein L22P OS=Methanosarcina mazei GN=rpl22p PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.465e-15 Identity = 46/111 (41.44%), Postives = 67/111 (60.36%), Query Frame = -3 Query: 385 TKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 717 ++A+++LEDV+A KQA+PF R G G + P GR+PV ++K IL +LKNAESNAE KGL+ +YI H + + + RA GR +P + +IE+ LS Sbjct: 43 SEARKFLEDVIAMKQAVPFKRHSEGAGH-----RKGPMAGGRYPVSASKEILKVLKNAESNAEYKGLEPANMYIIHAAIQRGRVIHGFMPRARGRASPKDTETVNIEMILS 148
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_THEVO (50S ribosomal protein L22P OS=Thermoplasma volcanium GN=rpl22p PE=3 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.008e-14 Identity = 42/112 (37.50%), Postives = 67/112 (59.82%), Query Frame = -3 Query: 385 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 720 L AK+ LEDV++ K AIP+ R+ V +R G GR+PVK+AK +DLL N E+NAE KG++ D+L I H+ N+ + ++ T +A+GR ++E+ ++ Sbjct: 39 LDYAKQILEDVVSKKYAIPYFRYLDSVS------HRPGKGPGRYPVKAAKVFIDLLSNVENNAEFKGMNTDSLIIKHVAANKGRMIKKYTPKAYGRAGANFKDLINLEVIVT 144
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_METBU (50S ribosomal protein L22P OS=Methanococcoides burtonii (strain DSM 6242) GN=rpl22p PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.720e-14 Identity = 44/109 (40.37%), Postives = 66/109 (60.55%), Query Frame = -3 Query: 385 AKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 711 A++YLEDV+ KQA+PF R +G + P GR+PVK A +L LLKNAESNAE KGL+ + ++I+H +N+ + RA GR +P + ++E+ +S Sbjct: 45 ARQYLEDVVILKQAVPFGRHNDSLGH-----RKGPMAAGRYPVKVASEMLKLLKNAESNAEYKGLNPEHMFIAHTAMNRGRVIHGMRPRARGRASPENTETVNLEMIIS 148
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_METAC (50S ribosomal protein L22P OS=Methanosarcina acetivorans GN=rpl22p PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 5.003e-14 Identity = 43/111 (38.74%), Postives = 66/111 (59.46%), Query Frame = -3 Query: 385 TKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 717 ++A+++LEDV+A KQA+PF + G G + P G++P+ ++K IL +LKNAESNAE KGL+ +YI H + + + RA GR P + +IE+ LS Sbjct: 43 SEARKFLEDVIAMKQAVPFKKHHDGSGH-----RKGPMAAGKYPISASKEILKVLKNAESNAEYKGLEPANMYIIHAAIQRGRVIHGFMPRARGRATPKDTETVNIEMILS 148
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_STAMF (50S ribosomal protein L22P OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl22p PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.534e-14 Identity = 45/113 (39.82%), Postives = 70/113 (61.95%), Query Frame = -3 Query: 388 LTKAKRYLEDVMAHKQAIPFTRFCGGVG--RTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 720 +++AK+ LE+V+A ++ IPF R+ G + R AK + P G R+PVK+AK++L LL++ E+NA+ KGLD D L I HI ++ +R RA GR P H+E+ + Sbjct: 43 VSEAKKLLENVIALREPIPFKRYKGKLSHKRGLPAKWKWPIG--RYPVKAAKYLLRLLEHVEANADNKGLDKDKLVIVHIAAHKGMTLKRWMPRAFGRATPKFRRTSHVEIVV 153
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_PYRKO (50S ribosomal protein L22P OS=Pyrococcus kodakaraensis GN=rpl22p PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.115e-13 Identity = 46/111 (41.44%), Postives = 60/111 (54.05%), Query Frame = -3 Query: 388 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 720 L A RYL+DV+A K+ +P RF G K G GR+PVK AK + +L NA++NAE KGLDVD L I H ++ R RA GR P+ HIE+ + Sbjct: 45 LNDALRYLDDVIAKKRPVPMKRFNDSQGH----KPGKGFGPGRYPVKVAKAVKKILLNAKNNAEQKGLDVDRLKIIHAAAHRGPVLRGYIPRAFGRATPFNEQTTHIEIVV 151 The following BLAST results are available for this feature:
BLAST of CN186103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186103 ID=CN186103; Name=CN186103; organism=Citrus sinensis; type=EST; length=722bpback to top |