CN186103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_SULAC (50S ribosomal protein L22P OS=Sulfolobus acidocaldarius GN=rpl22p PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.456e-13 Identity = 41/111 (36.94%), Postives = 61/111 (54.95%), Query Frame = -3 Query: 388 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 720 L +A+ +L +V+ K+A+PF R+ G + + GR+P K+ K++L LL NAE+NA KGLD+D L I HI ++ +R RA GR HIE+ L Sbjct: 43 LKEAREFLNNVLEEKEALPFWRYSHGTSHRSNISRKWKVKSGRYPKKAIKYVLKLLDNAENNANSKGLDIDNLKIVHIAAHKGLVLKRYMTRAFGRSTRKYKYLSHIEVIL 153
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_METJA (50S ribosomal protein L22P OS=Methanocaldococcus jannaschii GN=rpl22p PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.483e-13 Identity = 44/111 (39.64%), Postives = 65/111 (58.56%), Query Frame = -3 Query: 388 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 720 L +A ++LEDV+A ++ + F R C VG K + GR+PVK+AK IL +L++A++NAE KGL+ + L I HI N+ +R RA GR P HI++ L Sbjct: 45 LDEAIKFLEDVIAMRRPVLFRRHCKKVGHR---KGKLGWPAGRYPVKAAKAILKILQHAKANAEYKGLNTEKLRIKHISTNKGITIKRYMPRAFGRATPKFQETVHIQVIL 152
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_METTH (50S ribosomal protein L22P OS=Methanobacterium thermoautotrophicum GN=rpl22p PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.243e-13 Identity = 46/113 (40.71%), Postives = 66/113 (58.41%), Query Frame = -3 Query: 388 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNG--QGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 720 L KAK+YLE+V+ ++ + F R+ VG R NG GR+PVK+A IL +L+NAE+NAE KGLD + L I HI ++ R RA GR P+ + H+++ L Sbjct: 43 LEKAKKYLEEVIRMERPVAFKRYNRKVGH-----RRGLNGWASGRYPVKAAGQILKVLENAEANAEYKGLDTEKLRIIHISSHRGPVIRGWIPRAFGRATPFNTPTTHVQIVL 150
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_METST (50S ribosomal protein L22P OS=Methanosphaera stadtmanae (strain DSM 3091) GN=rpl22p PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13 Identity = 46/111 (41.44%), Postives = 64/111 (57.66%), Query Frame = -3 Query: 388 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 720 L AK +LEDV+A K +PF R VG + K GR+PVK+A IL +L+NAE+NAE + LDV+ L + H+ N+ R T RA GR +P + HI++ L Sbjct: 44 LEDAKAFLEDVIAKKTVVPFKRHNKKVGHRSDLKGWP---SGRYPVKAAAAILKVLENAEANAENEELDVENLKLVHVCANRGVIIRGWTPRAFGRASPSNTPTTHIQIVL 151
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_HYPBU (50S ribosomal protein L22P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rpl22p PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.236e-13 Identity = 46/112 (41.07%), Postives = 65/112 (58.04%), Query Frame = -3 Query: 385 KAKRYLEDVMAHKQAIPFTRFCGGVG--RTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 714 +A+R+LE V ++ IP R+ G R AK + P G R+PVK+AK +L LL N +NAEVKGLD + L I HI V++ + +R RA GR P HIE+ ++ Sbjct: 44 EARRFLERVARGEEPIPVRRYSGKQAHHRGLAAKYKWPIG--RYPVKAAKILLRLLDNVTNNAEVKGLDTERLRIVHIAVHKGRVLKRWMPRAFGRATPKFKKYSHIEIVVA 153
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_THEPD (50S ribosomal protein L22P OS=Thermofilum pendens (strain Hrk 5) GN=rpl22p PE=3 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.232e-12 Identity = 41/109 (37.61%), Postives = 60/109 (55.05%), Query Frame = -3 Query: 394 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 720 + +A+R L ++ K+++P R+ VG + G GR+PVK AK +L LL N E+NAE KGL+V+ L I H ++ K R RA GR PY H+E+ Sbjct: 42 IEEARRILTEIAEMKRSVPLKRYNKKVGHRSDVP-----GPGRYPVKVAKNLLKLLDNLENNAEFKGLNVENLRIVHAAAHKGMKIRNYLPRAFGRATPYYDQLVHVEI 145
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_METKA (50S ribosomal protein L22P OS=Methanopyrus kandleri GN=rpl22p PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.609e-12 Identity = 44/111 (39.64%), Postives = 64/111 (57.66%), Query Frame = -3 Query: 388 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 720 L +AK +L V+ ++A+PF + V Q R GR+P K+A+ IL +L++AE+NAE KGLD D LYI HI ++ + R RA GR P+ + HIE+ L Sbjct: 48 LDRAKEFLRRVIRKEEAVPFRKHKKKVPHRRQI--RPGWDAGRFPEKAAREILRVLEHAEANAEYKGLDTDRLYIKHIAAHKGRVIRGWIPRAFGRATPFNTPTTHIEVIL 156
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_HALWD (50S ribosomal protein L22P OS=Haloquadratum walsbyi (strain DSM 16790) GN=rpl22p PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.745e-12 Identity = 36/111 (32.43%), Postives = 66/111 (59.46%), Query Frame = -3 Query: 388 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 720 + A+ YL+DV+A +Q++PF + GVG + GR+P K++K L+L++N SNA +G D +A+ I H+ ++ +++ R RA G +P+ ++ C +EL + Sbjct: 41 IADAESYLDDVIAQRQSVPFRQHNSGVGHRSDIDGWDA---GRYPEKASKAFLELIENVASNANEQGFDGNAMAIRHVAAHKVGERQGRKPRAFGSADPWNTTICDVELII 148
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_PYRHO (50S ribosomal protein L22P OS=Pyrococcus horikoshii GN=rpl22p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.586e-12 Identity = 45/111 (40.54%), Postives = 60/111 (54.05%), Query Frame = -3 Query: 388 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 720 L A RYL++V+A K+ +P R+ G K G GR+PVK AK I +L NA++NAE KGLD D L I HI ++ R RA GR P+ HIE+ + Sbjct: 44 LNDALRYLDEVIALKRPVPLRRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNAKNNAEQKGLDPDKLKIIHIAAHRGPVLRGWYPRAFGRATPFNEQTTHIEVVV 150
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_ARCFU (50S ribosomal protein L22P OS=Archaeoglobus fulgidus GN=rpl22p PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.586e-12 Identity = 42/109 (38.53%), Postives = 61/109 (55.96%), Query Frame = -3 Query: 394 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 720 + +A++ LEDV+ K+AIPF R + A + GR+P K+AK++L +L+N E+NAE KGLDV+ L I H Q + + R RA GR P +EL Sbjct: 45 IEEARKLLEDVVEMKRAIPFKRH---KKKVAHRRGLEKWYAGRYPQKAAKYVLKVLRNLEANAEYKGLDVENLVIVHAQAQKGRVIERYMPRAFGRATPRFQQLTTVEL 150 The following BLAST results are available for this feature:
BLAST of CN186103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186103 ID=CN186103; Name=CN186103; organism=Citrus sinensis; type=EST; length=722bpback to top |