CN186103
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_METMJ (50S ribosomal protein L22P OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=rpl22p PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12 Identity = 45/111 (40.54%), Postives = 63/111 (56.76%), Query Frame = -3 Query: 385 TKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 717 T+AK YL DV+A K+AIPF RF V + ++ P GR+PVK+A+ + LL++ E NAE GLDV+ L I H N + R RA GR P +IE+ ++ Sbjct: 43 TEAKAYLTDVVALKKAIPFKRFNRNVAHK-RGLSKWP--AGRYPVKAAEAYIRLLESVEKNAEYIGLDVENLRIDHAAANTGRGLRAFFPRAMGRATPKRRETVNIEIVVT 150
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_PYRAB (50S ribosomal protein L22P OS=Pyrococcus abyssi GN=rpl22p PE=3 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.043e-11 Identity = 44/111 (39.64%), Postives = 60/111 (54.05%), Query Frame = -3 Query: 388 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 720 L A RYL+DV+A ++ +P R+ G K G GR+PVK AK I +L NA++NA+ KGLD D L I HI ++ R RA GR P+ HIE+ + Sbjct: 44 LNDALRYLDDVIALRRPVPLKRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNAQNNAKQKGLDPDKLRIIHIAAHRGPVLRGWYPRAFGRPTPFNEQTTHIEVVV 150
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_SULTO (50S ribosomal protein L22P OS=Sulfolobus tokodaii GN=rpl22p PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.780e-11 Identity = 38/111 (34.23%), Postives = 61/111 (54.95%), Query Frame = -3 Query: 388 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 720 L AK++L +V+ K+A+PF + G + + GR+P K+ K++L +L+NAE+NA KGLD++ + I HI ++ +R RA GR HIE+ L Sbjct: 43 LNDAKQFLNNVLEEKEALPFWKHSHGASHRSNISPKWKVKSGRYPKKAIKYVLKVLENAENNANSKGLDLENVKIVHIAAHKGIILKRYMPRAFGRSTRKYRYTSHIEVIL 153
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_THEAC (50S ribosomal protein L22P OS=Thermoplasma acidophilum GN=rpl22p PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.324e-11 Identity = 39/112 (34.82%), Postives = 63/112 (56.25%), Query Frame = -3 Query: 385 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTLS 720 L++AK ++ V+ AIP+ R+ V +R G GR+PVK+AK LL+N E+NAE KGL+ D L I HI N+ + ++ T +A+GR ++E+ ++ Sbjct: 42 LSRAKEIIDAVINKTYAIPYFRYLDSVS------HRPGVGPGRYPVKAAKAFKQLLENVENNAEFKGLNTDNLVIKHIAANKGRMIKKYTPKAYGRAGANFKDLINLEIIVT 147
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_PYRFU (50S ribosomal protein L22P OS=Pyrococcus furiosus GN=rpl22p PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.324e-11 Identity = 44/111 (39.64%), Postives = 58/111 (52.25%), Query Frame = -3 Query: 388 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 720 L A RYL+DV+A K+ +P R+ G K G GR+PVK AK I +L N ++NA KGLD D L I HI ++ R RA GR P+ HIE+ + Sbjct: 44 LNDALRYLDDVIALKRPVPLKRYNDSQGH----KPGKGFGPGRYPVKVAKAIKKVLLNVKNNAVQKGLDPDKLKIIHIAAHKGPVLRGWYPRAFGRATPFNEQTTHIEVVV 150
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_SULSO (50S ribosomal protein L22P OS=Sulfolobus solfataricus GN=rpl22p PE=3 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 3.964e-11 Identity = 40/111 (36.04%), Postives = 59/111 (53.15%), Query Frame = -3 Query: 388 LTKAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELTL 720 L AK +L V+ K+A+PF R+ G + + GR+P K+ + +L +L+NAE+NA KGLDVD L I HI ++ +R RA GR +IE+ L Sbjct: 43 LNDAKDFLNRVLEEKEALPFWRYNKGASHKSNISAKWKIKAGRYPKKAIRQVLKVLENAEANATNKGLDVDKLIIRHIAAHKGITLQRYMPRAFGRATAKYRRTSNIEVIL 153
BLAST of CN186103 vs. ExPASy Swiss-Prot
Match: RL22_AERPE (50S ribosomal protein L22P OS=Aeropyrum pernix GN=rpl22p PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.178e-11 Identity = 39/107 (36.45%), Postives = 59/107 (55.14%), Query Frame = -3 Query: 394 KAKRYLEDVMAHKQAIPFTRFCGGVGRTAQAKNRHPNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDALYISHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIEL 714 +A+RYL V+ ++A+PF R G ++ GR+PVK+A+++L LL N E+NA K LDV+ L I H+ ++ +R RA GR P HIE+ Sbjct: 45 EARRYLRAVIEKREAVPFRRAHGKQAHRRGLADKWGWPVGRYPVKAARYMLKLLDNVEANAANKNLDVERLKIIHVAAHKGITLKRWMPRAWGRATPRNRVHSHIEI 151 The following BLAST results are available for this feature:
BLAST of CN186103 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186103 ID=CN186103; Name=CN186103; organism=Citrus sinensis; type=EST; length=722bpback to top |