CN186095
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA6_SCHPO (Probable proteasome subunit alpha type-6 OS=Schizosaccharomyces pombe GN=SPBC646.16 PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 1.147e-41 Identity = 89/163 (54.60%), Postives = 117/163 (71.78%), Query Frame = -3 Query: 309 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP-AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 794 ADAR V +AR EAAEF +K GY MP DVLAK +A+ +QV TQ A MRPLGV ++++D+E GP LFK DPAG + G+KATSAG K+ E IN+LEK+ K D +TV+T I L S L DFK++E+++GVV + P FRVLS+EEI+ HL +I+E+D Sbjct: 83 ADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQRAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDGIPSNLTDTVETGIQALMSSLSTDFKSTELQIGVVEDDKP-FRVLSVEEIEAHLQSIAEKD 244
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA6_DICDI (Proteasome subunit alpha type-6 OS=Dictyostelium discoideum GN=psmA6 PE=3 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.689e-40 Identity = 83/166 (50.00%), Postives = 120/166 (72.29%), Query Frame = -3 Query: 309 DARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQT-----AISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 791 D+++ +A E A F K+GY++P +VLAK +AD +Q+ TQHA RPLGV +++ ID+E GP+LFK DPAG F G+KAT+AG KEQE+ NFLEKK K++P + ET+Q AISTLQSVL D K+S++E+G+ + +N +F +++ E+ID LT ++ERD Sbjct: 85 DSKSQASRAIQECATFHHKFGYQIPPNVLAKRMADIAQLSTQHASARPLGVAMILIGIDDELGPQLFKVDPAGVFTGYKATAAGEKEQESTNFLEKKFKSNPQLSKDETIQVSLIVMAISTLQSVLGADLKSSDLEIGICTMDNRKFVIMTDEDIDSQLTKLAERD 250
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA6_YEAST (Proteasome component C7-alpha OS=Saccharomyces cerevisiae GN=SCL1 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.228e-35 Identity = 81/166 (48.80%), Postives = 115/166 (69.28%), Query Frame = -3 Query: 309 DARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE---KKMKND--PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 791 DAR +A+ EAAEFR+KYGY+MP DVLAK +A+ SQ+YTQ AYMRPLGV+ +S+DEE GP ++K DPAG++ G+KAT+ G K+QE LE KK K D ++++ V+ AI+ + L +F +++EVGV +K+ +F LS E I+E L AI+E+D Sbjct: 89 DARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKIDHINEESWEKVVEFAITHMIDALGTEFSKNDLEVGVATKD--KFFTLSAENIEERLVAIAEQD 252
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA6_CAEEL (Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.168e-32 Identity = 67/161 (41.61%), Postives = 109/161 (67.70%), Query Frame = -3 Query: 309 DARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD 791 DA+ +++A+ EAA +++K GY+MP ++LAK +AD +Q YTQ+A MR LG + +S D+E GP +++ DPAG++ G K S G+K+ A +FLEKK+K T E ++ AI LQ+ L D ++ ++EV VV+K+N +F L+ ++++ HL I+ RD Sbjct: 86 DAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEALQTSLGIDVRSKDLEVVVVTKDNSKFTKLTSDQVEHHLNQIANRD 246
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 5.718e-25 Identity = 66/164 (40.24%), Postives = 96/164 (58.54%), Query Frame = -3 Query: 309 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI--SERD 794 ADAR LV++AR EA +R+ YG + VDVL K I D QVYTQH +RP G ++ +D + G RLF+ DP+G HKAT+ G QEA++ E++ + D T QE ++ A+ L +E+ A +E+ VV K+ FR L ++I+E + SE D Sbjct: 85 ADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTK-GCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYRED--MTLQEAIELAVRALYEASREETTADNLEIAVVDKQG--FRKLERKKIEEMFERVVGSEED 243
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.656e-22 Identity = 61/179 (34.08%), Postives = 101/179 (56.42%), Query Frame = -3 Query: 258 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSRPIINAETKKQK 794 ADAR L+ +AR EA +R YG E+ +++LAK I D Q YTQH +RP GV ++ ID+ RLF+ DP+G +KAT+ G + LEK+ ++D T E ++ AI+ L ED K ++V +++ ++ +F+ + +EEI + + + ++ E + N E K+K Sbjct: 84 ADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKN-EARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDD--ITLDEGLELAITALTKA-NEDIKPENVDVCIITVKDAQFKKIPVEEIKKLIEKVKKKLNEENKKEEENREETKEK 258
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBB (Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.116e-20 Identity = 65/166 (39.16%), Postives = 98/166 (59.04%), Query Frame = -3 Query: 315 DARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID--EECG---PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTF--QETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISE 791 D + LVQ+AR EA+E++++YG M V VLAK D +QV TQ A MR +G + + ++ +E G P+++ DPAG H A + G K+ EA FLEKK KN P T +E A++ LQS L E +AS +EVG + ++ F +S E+ + LT +++ Sbjct: 83 DGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQDMAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGGAAVH-ACAVGKKQIEACAFLEKKQKNAPFHTLSQKEAAMIALAALQSALGESLRASGVEVGRCTADDHHFLRVSDREVKKWLTPLAK 247
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 3.247e-20 Identity = 55/158 (34.81%), Postives = 92/158 (58.23%), Query Frame = -3 Query: 321 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 794 ADAR LV +AR EA R YG P+ V+ K I D Q++TQ+ +RP G ++ ++E+ P L++ DP+G +F KA + G A+ E+K K+D + +E ++ AI L +++ A IEV +++ ++ +FR LS EEI+++L + Sbjct: 85 ADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDD--MSLEEAIKLAIFALAKTMEKP-SAENIEVAIITVKDKKFRKLSREEIEKYLNEV 237
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_METBF (Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=psmA PE=3 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 7.234e-20 Identity = 55/168 (32.74%), Postives = 89/168 (52.98%), Query Frame = -3 Query: 291 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSR 794 ADAR+LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G + E + + D + + L + F AS +EVG+VS ++ +FR L EE++ ++ I E+ E ++ Sbjct: 84 ADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDNL-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQD--MNMDAAILLGMDALYRAAEGKFDASTLEVGIVSLQDKKFRKLVPEEVENYVQQILEKHKETENK 248
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_METAC (Proteasome subunit alpha OS=Methanosarcina acetivorans GN=psmA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.447e-20 Identity = 55/161 (34.16%), Postives = 84/161 (52.17%), Query Frame = -3 Query: 312 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 794 ADAR+LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G + E + D + + L + F A +EVGVVS E+ +FR L EE++ ++ I E+ Sbjct: 82 ADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDN-KPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED--MNMDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVQQILEK 239 The following BLAST results are available for this feature:
BLAST of CN186095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186095 ID=CN186095; Name=CN186095; organism=Citrus sinensis; type=EST; length=799bpback to top |