CN186095
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.611e-19 Identity = 53/158 (33.54%), Postives = 92/158 (58.23%), Query Frame = -3 Query: 321 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 794 ADAR LV +AR EA +R YG PV V+ K I D Q++TQ+ +RP G ++ I++ P L++ DP+G +F KA + G A+ E+K ++D ++ ++ A+ L + E+ A IEV V++ ++ +FR L+ +EI+++L+ + Sbjct: 85 ADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAGINDR--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDD--MNLEDAIKLALMALAKTM-ENPSADNIEVAVITVKDKKFRKLTRDEIEKYLSEV 237
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_METTE (Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.611e-19 Identity = 56/168 (33.33%), Postives = 87/168 (51.79%), Query Frame = -3 Query: 291 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSR 794 ADAR LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++ +D++ PRLF+ DP+G +KAT+ G + E K D + + + L + F A +EVGVVS ++ +FR L EE+ ++ I E+ E ++ Sbjct: 82 ADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDK-RPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKED--MNIEAAILLGMDALYKAAEGKFDAGTLEVGVVSLQDKKFRKLEPEEVGNYVQQILEKHKETENK 246
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_THESM (Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=psmA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.105e-19 Identity = 53/151 (35.10%), Postives = 89/151 (58.94%), Query Frame = -3 Query: 342 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEI 794 ADAR LV +AR EA +R YG +P+ VL K I D Q++TQ+ +RP G ++ ++E+ P LF+ DP+G +F KA + G A+ E+K +++ T +E ++ A+ L +++E S IEV V+S + +F+ ++ EE+ Sbjct: 85 ADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDE--MTLEEAIKLAVLALSKIMEEPSPES-IEVAVISVKEKKFKKITPEEV 230
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_METMA (Proteasome subunit alpha OS=Methanosarcina mazei GN=psmA PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.105e-19 Identity = 55/161 (34.16%), Postives = 84/161 (52.17%), Query Frame = -3 Query: 312 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 794 ADAR+LV +AR EA R Y + V+V++K I D Q YTQ+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G + E + D + + L + F A +EVGVVS E+ +FR L EE++ ++ I E+ Sbjct: 84 ADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQYGGVRPYGTALLIAGVDDN-KPRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED--MNIDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVHQILEK 241
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 4.689e-19 Identity = 55/155 (35.48%), Postives = 88/155 (56.77%), Query Frame = -3 Query: 330 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 794 ADAR LV +AR EA R YG P+ V+ K I D Q++TQ+ +RP G ++ ++++ P L++ DP+G +F KA + G A+ E K ++D T E ++ AI L +++ A IEV V++ ++ +FR LS EEI++ L Sbjct: 85 ADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNDK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDD--MTLDEAIKLAIFALAKTMEKP-SAENIEVAVITVKDKKFRKLSKEEIEKFL 234
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA7_RAT (Proteasome subunit alpha type-7 OS=Rattus norvegicus GN=Psma7 PE=1 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.039e-18 Identity = 59/180 (32.78%), Postives = 93/180 (51.67%), Query Frame = -3 Query: 258 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSRPIINAETKKQK 797 TADAR ++ +AR E R G + V+ + ++IA Q YTQ RP G+ A+++ D + PRL++ DP+G + KA + G + FLEK +D T T++ I L V+Q K IE+ V+ ++ P ++LS EEI++++ I + E E KKQK Sbjct: 83 TADARIVINRARVECQSHRLTVGDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDDAIETDDLTIKLVIKALLEVVQSGGK--NIELAVMRRDQP-LKILSPEEIEKYVAEIEKEKEE--------NEKKKQK 251
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_METM5 (Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=psmA PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.184e-18 Identity = 56/161 (34.78%), Postives = 84/161 (52.17%), Query Frame = -3 Query: 312 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 794 ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K D T E ++ A+ L S E+ K I++ +V +S++EI++ + A+ ++ Sbjct: 85 ADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSED--MTVNEGMELALYAL-SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAVYKK 241
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_METMP (Proteasome subunit alpha OS=Methanococcus maripaludis GN=psmA PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18 Identity = 56/161 (34.78%), Postives = 84/161 (52.17%), Query Frame = -3 Query: 312 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 794 ADAR L+ +AR EA R YG + V+ LAK I D Q YTQH RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K D T E ++ A+ L S E+ K I++ ++ +S++EI++ + A+ E+ Sbjct: 85 ADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQHGGARPFGLALLITGIDRH-SARLFETDPSGALIEYKATAIGSGRPIAMEVLESKY--DENMTVSEGMELALYAL-SKTTEELKPENIDMAIIKDSGKLVEKISVDEIEKIVKAVYEK 241
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_ARCFU (Proteasome subunit alpha OS=Archaeoglobus fulgidus GN=psmA PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.770e-18 Identity = 53/168 (31.55%), Postives = 90/168 (53.57%), Query Frame = -3 Query: 291 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSR 794 ADAR L+ +AR EA R Y + V LAK I D Q YTQ+ +RP GV ++ +DE P+L++ DP+G +KAT+ G+ F EK+ ++D +F + + + + ++ + IEVG V ++ F+ +S EE+ ++ +ER E++ + Sbjct: 83 ADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQYGGVRPFGVSLLIAGVDEV--PKLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDD--LSFDDAMVLGLVAMGLSIESELVPENIEVGYVKVDDRTFKEVSPEELKPYVERANERIRELLKK 246
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2) HSP 1 Score: 90.8929 bits (224), Expect = 8.843e-18 Identity = 56/155 (36.13%), Postives = 87/155 (56.13%), Query Frame = -3 Query: 330 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 794 ADAR LV AR A + + YG + ++ L K +AD+ Q YTQ+ +RP GV + ID + GPRLF CDPAG +KAT+ G + ++FLE++ K + +E V I L+S L+E + E+ ++ N ++R+ EE+ + L Sbjct: 83 ADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGID-QIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKEN--LPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGN-KYRIYDQEEVKKFL 233 The following BLAST results are available for this feature:
BLAST of CN186095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186095 ID=CN186095; Name=CN186095; organism=Citrus sinensis; type=EST; length=799bpback to top |