CN186095

Overview
NameCN186095
Unique NameCN186095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length799
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.178e-16
Identity = 48/155 (30.97%), Postives = 81/155 (52.26%), Query Frame = -3
Query:  330 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 794
            ADAR ++++AR EA   R  Y   + V+ LAK I D  Q+YTQH  +RP G   ++  ++   G RLF+ DP+G    +KAT+ G     A+   EKK  +D      + ++ A+  +    +       +E+ V+   + ++R L  +EI +H+
Sbjct:   84 ADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVNGR-GCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDD--MNLNQAIELALDAVYEATEGKTTPESVEIAVIEAADKKYRRLPDDEIRDHV 235          
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_METS5 (Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=psmA PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 2.178e-16
Identity = 52/160 (32.50%), Postives = 86/160 (53.75%), Query Frame = -3
Query:  321 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 794
            +D R L+  AR  + + R  Y   + +D L K I+D  Q+YTQH  +RP GV  +V  +D     +LF  +P+G F  ++A + G     A ++LEK  K D   + +ET+  A++ L+  L+  E      +E+G  +KE  +FR +++EE   +L  I
Sbjct:   85 SDGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMYTQHGGVRPFGVALIVGGVDRGV-TKLFMTEPSGQFMPYQAVAIGQGGYNATDYLEKNYKED--LSVEETILLALNALKVTLKPGEKLGPGNVEIGFATKEG-QFRKMTLEERANYLQKI 240          
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_SULAC (Proteasome subunit alpha OS=Sulfolobus acidocaldarius GN=psmA PE=3 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.845e-16
Identity = 52/160 (32.50%), Postives = 80/160 (50.00%), Query Frame = -3
Query:  321 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 794
            +D R L+  AR +A + R  Y   + ++ L K I+D  Q YTQH  +RP GV  +V  ID+   P+L   +P+G F  + A + G     A  +LEK  K D     Q T+  A+  L + L+  E    S +E+G    ++  F+ L+ EE  + L  I
Sbjct:   85 SDGRILIDYARSQALQHRLIYDEPISIEYLTKVISDVKQAYTQHGGVRPFGVALIVGGIDKGKQPKLLMTEPSGQFMPYYAVAIGQGGYTATEYLEKNYKED--LDIQSTILLALRALMATLKPGEKLNYSSVEIGYADVDSGTFKKLTTEERSDLLQKI 242          
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA7B_XENLA (Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-B PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.845e-16
Identity = 56/180 (31.11%), Postives = 91/180 (50.56%), Query Frame = -3
Query:  258 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSRPIINAETKKQK 797
            TADAR ++ +AR E    R      + V+ + ++IA   Q YTQ    RP G+ A+++  D +  PRL++ DP+G +   KA + G   +    FLEK   ++   T   T++  I  L  V+Q   K   IE+ V+ ++ P  ++L+ EEI+ ++  I +   E         E KKQK
Sbjct:   77 TADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQSGGK--NIELAVMRRDQP-LKILNPEEIERYVAEIEKEKEE--------NEKKKQK 245          
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.845e-16
Identity = 56/180 (31.11%), Postives = 91/180 (50.56%), Query Frame = -3
Query:  258 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSRPIINAETKKQK 797
            TADAR ++ +AR E    R      + V+ + ++IA   Q YTQ    RP G+ A+++  D +  PRL++ DP+G +   KA + G   +    FLEK   ++   T   T++  I  L  V+Q   K   IE+ V+ ++ P  ++L+ EEI+ ++  I +   E         E KKQK
Sbjct:   77 TADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQSGGK--NIELAVMRRDQP-LKILNPEEIERYVAEIEKEKEE--------NEKKKQK 245          
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_SULIY (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=psmA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.715e-16
Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = -3
Query:  330 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 794
            +D R L+  AR  A + R  Y   + +D L K +AD  Q+YTQH  +RP GV  ++  ID+   P+L+  +P+G +  ++A + G     A  FLEK  K D   T ++T+  A+  L + L+  E    + +E+G  S +   F  ++ E+ + +L
Sbjct:   85 SDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238          
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_SULIN (Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=psmA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.715e-16
Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = -3
Query:  330 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 794
            +D R L+  AR  A + R  Y   + +D L K +AD  Q+YTQH  +RP GV  ++  ID+   P+L+  +P+G +  ++A + G     A  FLEK  K D   T ++T+  A+  L + L+  E    + +E+G  S +   F  ++ E+ + +L
Sbjct:   85 SDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238          
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_SULIM (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=psmA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.715e-16
Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = -3
Query:  330 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 794
            +D R L+  AR  A + R  Y   + +D L K +AD  Q+YTQH  +RP GV  ++  ID+   P+L+  +P+G +  ++A + G     A  FLEK  K D   T ++T+  A+  L + L+  E    + +E+G  S +   F  ++ E+ + +L
Sbjct:   85 SDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238          
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_SULIL (Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=psmA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.715e-16
Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = -3
Query:  330 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 794
            +D R L+  AR  A + R  Y   + +D L K +AD  Q+YTQH  +RP GV  ++  ID+   P+L+  +P+G +  ++A + G     A  FLEK  K D   T ++T+  A+  L + L+  E    + +E+G  S +   F  ++ E+ + +L
Sbjct:   85 SDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238          
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_SULIK (Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=psmA PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.715e-16
Identity = 49/157 (31.21%), Postives = 83/157 (52.87%), Query Frame = -3
Query:  330 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 794
            +D R L+  AR  A + R  Y   + +D L K +AD  Q+YTQH  +RP GV  ++  ID+   P+L+  +P+G +  ++A + G     A  FLEK  K D   T ++T+  A+  L + L+  E    + +E+G  S +   F  ++ E+ + +L
Sbjct:   85 SDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED--LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238          
The following BLAST results are available for this feature:
BLAST of CN186095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
PSMA_METTH2.178e-1630.97Proteasome subunit alpha OS=Methanobacterium therm... [more]
PSMA_METS52.178e-1632.50Proteasome subunit alpha OS=Metallosphaera sedula ... [more]
PSMA_SULAC2.845e-1632.50Proteasome subunit alpha OS=Sulfolobus acidocaldar... [more]
PSA7B_XENLA2.845e-1631.11Proteasome subunit alpha type-7-B OS=Xenopus laevi... [more]
PSA7A_XENLA2.845e-1631.11Proteasome subunit alpha type-7-A OS=Xenopus laevi... [more]
PSMA_SULIY3.715e-1631.21Proteasome subunit alpha OS=Sulfolobus islandicus ... [more]
PSMA_SULIN3.715e-1631.21Proteasome subunit alpha OS=Sulfolobus islandicus ... [more]
PSMA_SULIM3.715e-1631.21Proteasome subunit alpha OS=Sulfolobus islandicus ... [more]
PSMA_SULIL3.715e-1631.21Proteasome subunit alpha OS=Sulfolobus islandicus ... [more]
PSMA_SULIK3.715e-1631.21Proteasome subunit alpha OS=Sulfolobus islandicus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F19_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186095 ID=CN186095; Name=CN186095; organism=Citrus sinensis; type=EST; length=799bp
TTTTTTTTTTTTTTTTTCTAAAATTGCCATTCATCATAATAATCACTATG
GCCATGAAAGGCACTTGTCAATAGTCGTTATCAAGCCAATGTAGTAGTAA
AAGTCAACAGCTACCACTAGCACAAAGCACTTCCCCTGGTTGGCACAGCA
TAGTCACATAACTTGTTTTTCAACGTTTTGTTTTCTGCTTTGGAGGGCAA
TGGCTGTGTATTACCGAATGCACTTAAAATTATAAATTCAAGATACAGGG
AAAAGCATTTTTGTTTTTTGGTTTCAGCATTTATGATGGGGCGTGAAACC
ACCTCCTAATCTCGTTCACTTATAGCAGTCAAGTGCTCATCGATCTCCTC
GATGGACAAAACTCTGAATTCTGGATTCTCCTTGCTCACCACGCCAACCT
CAATCTCACTCGCCTTAAAATCCTCTTGCAGGACTGATTGCAGGGTGGAA
ATTGCAGTCTGCACAGTTTCTTGAAAGGTAAACGCAGGATCATTCTTCAT
CTTCTTCTCCAAGAAATTAATTGCCTCTTGCTCCTTCAATCCAGCACTTG
TTGCCTTGTGGCCAAAGAAATGGCCAGCAGGGTCACACTTAAAGAGGCGA
GGTCCACATTCTTCGTCAATACTCAAAACCATAGCAACTACACCAAGTGG
TCTCATATAAGCATGTTGAGTATATACTTGTGATTTGTCTGCAATCCATT
TGGCTAACACATCCACAGGCATTTCATATCCATATTTGAAGCGAAACTCA
GCGGCTTCATATCTTGCCTGCTGAACCAATGTCCTTGCATCAGCTGTCA
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