CN186095
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA1_CHICK (Proteasome subunit alpha type-1 OS=Gallus gallus GN=PSMA1 PE=2 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 8.276e-16 Identity = 51/164 (31.10%), Postives = 81/164 (49.39%), Query Frame = -3 Query: 312 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVL--QEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 797 TADAR L R E + RF + +PV L I K+Q+ TQ RP GV ++ D + GP +F+ P+ ++F KA S G + Q A N+LE+ M E V+ + L+ L ++D + +G+V K+ EF + +++ L + ER Sbjct: 77 TADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIFQTCPSANYFDCKAMSIGARSQSARNYLERHMTEFTDCNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKD-MEFTIYDDDDVAPFLEGLEER 238
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.412e-15 Identity = 50/160 (31.25%), Postives = 85/160 (53.12%), Query Frame = -3 Query: 315 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISE 794 ADAR LV +AR EA +R YG +P+ VL K I D Q +TQ+ +RP G ++ ++++ P L++ DP+G +F +A + G A+ E +D + ++ AI L L+E S IEV ++ ++ ++ + EE+ ++L I E Sbjct: 85 ADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNDK--PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDD--LDMEGAIKLAILALAKTLEEPSPES-IEVAYITMKDKRWKKMDKEEVAKYLGEILE 239
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA1_ORYSJ (Proteasome subunit alpha type-1 OS=Oryza sativa subsp. japonica GN=PAF1 PE=2 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.412e-15 Identity = 51/159 (32.08%), Postives = 87/159 (54.72%), Query Frame = -3 Query: 336 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ-EDFKASEIEVGVVSKEN----PEFRVLSIEEIDE 797 TAD R L + R E F Y +PV LA +ADK+QV TQ ++ RP GV +V +DE G L+ P+G++F ++A + G + Q A FLE++ + +T ++ ++ A+S ++ LQ E +S V +V +++ F ++ ++ I E Sbjct: 78 TADGRVLSRFLRSECINHAFVYDAPLPVSRLALRLADKAQVCTQRSWKRPYGVGLLVAGLDES-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTFLERRFEGYNDYTPEQLIKDALSAIKETLQGEKLTSSNCTVAIVGRKDDGTVEPFEMIDVKRIQE 235
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA1_HALVO (Proteasome subunit alpha 1 OS=Halobacterium volcanii GN=psmA1 PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.844e-15 Identity = 51/157 (32.48%), Postives = 80/157 (50.96%), Query Frame = -3 Query: 324 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTA 794 ADAR L+ AR+++ R +YG + ++ L K + D Q YTQ RP GV ++ + E PRL++ DP+G + KA S G + LE+ ++D T E ++ A+ + S E ++V VS E F LS +EI+ +L A Sbjct: 85 ADARQLIDFARHQSQVNRLRYGEPIGIETLTKEVTDHIQQYTQVGGARPFGVALLIGGV-ENGTPRLYETDPSGTPYEWKAVSIGADRGDHQEHLEENFRDD--LTLDEGIELALEAIASTSDEGTAPDGVDVATVSAETERFVELSNDEIESYLEA 238
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA7_CICAR (Proteasome subunit alpha type-7 OS=Cicer arietinum GN=PAD1 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 4.108e-15 Identity = 56/153 (36.60%), Postives = 77/153 (50.33%), Query Frame = -3 Query: 339 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECG-PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEID 794 ADAR L+ +AR E R + V+ + ++IA Q YTQ +RP G+ +++ D G P L++ DP+G F KA + G FLEK K QETV+ AI L V++ K IEV V++KEN R L EID Sbjct: 79 ADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSNSIREFLEKNFKETSG---QETVKLAIRALLEVVESGGK--NIEVAVMTKEN-GLRQLEEAEID 225
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAE (Proteasome subunit alpha OS=Pyrobaculum aerophilum GN=psmA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.365e-15 Identity = 52/158 (32.91%), Postives = 80/158 (50.63%), Query Frame = -3 Query: 321 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 794 ADAR L+ AR A RF Y + V+ L K + + Q YTQ RP GV ++ +D G RL++ DP+G + G+ AT+ G + FLEK K D E ++ A+ L S + E ++ +EV + E + R +S +E+ LT + Sbjct: 84 ADARILIDYARDVALSHRFIYDEPIDVEFLTKAVCNLKQQYTQFGGARPFGVALLIAGVDRH-GARLYQTDPSGVYIGYFATAIGAESGTITEFLEKNYKFD--MEMGECIELALKALASAV-EITDSANVEVAYATIEEKKMRKMSQDEVASLLTKL 237
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSMA_AERPE (Proteasome subunit alpha OS=Aeropyrum pernix GN=psmA PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.365e-15 Identity = 45/168 (26.79%), Postives = 85/168 (50.60%), Query Frame = -3 Query: 315 DARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASE---------IEVGVVSKENPEFRVLSIEEIDEHLTAISE 791 D R L+ AR R YG PV+++AK +AD Q YTQH +RP GV + ++ + ++++ DP G +F KA + G EQ A EK ++D + +E + A+ L +++++ + E +E+ ++ + F ++ E++ E + ++ E Sbjct: 88 DGRILIDYARVFTVRHRLLYGEPPPVELVAKVVADVKQAYTQHGGVRPFGVALIFAGVNPDGTTKVYRTDPGGQYFSFKAIAIGSGEQVANEMFEKHYRSD--MSLEEATKLALKILYAIIRKTVEDKEKAIATLPDQVELAYITVKERMFTKMTKEQVKEIVDSMRE 253
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA1_MOUSE (Proteasome subunit alpha type-1 OS=Mus musculus GN=Psma1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.365e-15 Identity = 49/164 (29.88%), Postives = 80/164 (48.78%), Query Frame = -3 Query: 312 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVL--QEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 797 TADAR L R E + RF + +PV L I K+Q+ TQ RP GV ++ D + GP +F+ P+ ++F +A S G + Q A +LE+ M E V+ + L+ L ++D + +G+V K+ EF + +++ L + ER Sbjct: 78 TADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLDELVKHGLRALRETLPAEQDLTTKNVSIGIVGKD-LEFTIYDDDDVSPFLDGLEER 239
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA1_MACFA (Proteasome subunit alpha type-1 OS=Macaca fascicularis GN=PSMA1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.365e-15 Identity = 49/164 (29.88%), Postives = 80/164 (48.78%), Query Frame = -3 Query: 312 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVL--QEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 797 TADAR L R E + RF + +PV L I K+Q+ TQ RP GV ++ D + GP +F+ P+ ++F +A S G + Q A +LE+ M E V+ + L+ L ++D + +G+V K+ EF + +++ L + ER Sbjct: 78 TADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKD-LEFTIYDDDDVSPFLEGLEER 239
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA1_HUMAN (Proteasome subunit alpha type-1 OS=Homo sapiens GN=PSMA1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.365e-15 Identity = 49/164 (29.88%), Postives = 80/164 (48.78%), Query Frame = -3 Query: 312 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVL--QEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 797 TADAR L R E + RF + +PV L I K+Q+ TQ RP GV ++ D + GP +F+ P+ ++F +A S G + Q A +LE+ M E V+ + L+ L ++D + +G+V K+ EF + +++ L + ER Sbjct: 78 TADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKD-LEFTIYDDDDVSPFLEGLEER 239 The following BLAST results are available for this feature:
BLAST of CN186095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186095 ID=CN186095; Name=CN186095; organism=Citrus sinensis; type=EST; length=799bpback to top |