CN186095
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA1_BOVIN (Proteasome subunit alpha type-1 OS=Bos taurus GN=PSMA1 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.365e-15 Identity = 49/164 (29.88%), Postives = 80/164 (48.78%), Query Frame = -3 Query: 312 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVL--QEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 797 TADAR L R E + RF + +PV L I K+Q+ TQ RP GV ++ D + GP +F+ P+ ++F +A S G + Q A +LE+ M E V+ + L+ L ++D + +G+V K+ EF + +++ L + ER Sbjct: 78 TADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKD-LEFTIYDDDDVSPFLEGLEER 239
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA7_CAEEL (Proteasome subunit alpha type-7 OS=Caenorhabditis elegans GN=pas-4 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.006e-15 Identity = 53/181 (29.28%), Postives = 92/181 (50.83%), Query Frame = -3 Query: 261 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEF--RVLSIEEIDEHLTAISERD*EVVSRPIINAETKKQ 797 +ADAR LV +AR E ++ + V ++++IA+ Q +TQ RP G+ ++ D + PRLFK +P+G ++ + A + G E+ +LE++ + T++ + +L V+ + IE+ V+ K N E RVLS EEI+ L + E V+ A +KK+ Sbjct: 78 SADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENTVDEATTLKLVVKSLAQVVPPG--SQNIEIAVMKKVNDELQQRVLSTEEIEALLKVVET---ERVAAEAEEAASKKK 253
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA1_RAT (Proteasome subunit alpha type-1 OS=Rattus norvegicus GN=Psma1 PE=1 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 7.006e-15 Identity = 49/164 (29.88%), Postives = 80/164 (48.78%), Query Frame = -3 Query: 312 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVL--QEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 797 TADAR L R E + RF + +PV L I K+Q+ TQ RP GV ++ D + GP +F+ P+ ++F +A S G + Q A +LE+ M E V+ + L+ L ++D + +G+V K+ EF + +++ L + ER Sbjct: 78 TADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHVFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMQCNLDELVKHGLRALRETLPAEQDLTTKNVSIGIVGKD-LEFTIYDDDDVSPFLDGLEER 239
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2) HSP 1 Score: 80.8777 bits (198), Expect = 9.151e-15 Identity = 52/158 (32.91%), Postives = 81/158 (51.27%), Query Frame = -3 Query: 318 DARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAIS 791 D R LV++AR A ++ Y +P L + +A Q YTQ +RP GV ++ DE P LF+ DP+G +F KAT+ G FLEK+ D ++ + TAI TL+ + IEVG+ ++ F+ L+ E+ ++L AI+ Sbjct: 82 DYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEG-RPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNED--LELEDAIHTAILTLKESFEGQMTEDNIEVGICNEAG--FKRLTPAEVKDYLAAIA 234
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA1_PONAB (Proteasome subunit alpha type-1 OS=Pongo abelii GN=PSMA1 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.151e-15 Identity = 49/164 (29.88%), Postives = 80/164 (48.78%), Query Frame = -3 Query: 312 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVL--QEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 797 TADAR L R E + RF + +PV L I K+Q+ TQ RP GV ++ D + GP +F+ P+ ++F +A S G + Q A +LE+ M E V+ + L+ L ++D + +G+V K+ EF + +++ L + ER Sbjct: 78 TADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYD-DMGPHIFQTCPSANYFDCRAMSIGARSQSARTYLERHMSEFMECNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKD-LEFTIHDDDDVSPFLEGLEER 239
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA7_SOLLC (Proteasome subunit alpha type-7 OS=Solanum lycopersicum GN=PAD1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.195e-14 Identity = 55/153 (35.95%), Postives = 77/153 (50.33%), Query Frame = -3 Query: 339 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECG-PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEID 794 ADAR LV +AR E R + V+ + ++IA Q YTQ +RP G+ +++ D G P L++ DP+G F KA + G FLEK K QETV+ AI L V++ K IEV V++KE+ + L EID Sbjct: 79 ADARVLVNKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPHTGVPSLYQTDPSGTFSAWKANATGRNSNSTREFLEKNYKETSG---QETVKLAIRALLEVVESGGK--NIEVAVMTKEH-GLKQLEEAEID 225
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA7A_ARATH (Proteasome subunit alpha type-7-A OS=Arabidopsis thaliana GN=PAD1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.195e-14 Identity = 53/153 (34.64%), Postives = 76/153 (49.67%), Query Frame = -3 Query: 339 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECG-PRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEID 794 ADAR L+ +AR E R + V+ + ++IA Q YTQ +RP G+ +++ D P L++ DP+G F KA + G FLEK K QETV+ AI L V++ K IEV V+++E + L EEID Sbjct: 79 ADARVLINKARIECQSHRLTLEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTRIPALYQTDPSGTFSAWKANATGRNSNSIREFLEKNYKESAG---QETVKLAIRALLEVVESGGK--NIEVAVMTREEGVLKQLEEEEID 226
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA7_CHICK (Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.561e-14 Identity = 54/180 (30.00%), Postives = 88/180 (48.89%), Query Frame = -3 Query: 258 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISERD*EVVSRPIINAETKKQK 797 TADAR ++ +AR E R + V+ + ++IA Q YTQ RP G+ A+++ D + PRL++ DP+G + KA + G + EK ++ T T++ I L V+Q K IE+ V+ ++ P + S EEI++++ I + E E KKQK Sbjct: 77 TADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSKRRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVRVEFEKNYTDEAIETDDLTIKLVIKALLEVVQSGGK--NIELAVMRRDQPLKILTSPEEIEKYVAEIEKEKEE--------NEKKKQK 246
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA1B_ARATH (Proteasome subunit alpha type-1-B OS=Arabidopsis thaliana GN=PAF2 PE=1 SV=2) HSP 1 Score: 80.1073 bits (196), Expect = 1.561e-14 Identity = 52/155 (33.55%), Postives = 84/155 (54.19%), Query Frame = -3 Query: 336 TADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPAFTFQETVQTAISTLQSVLQ-EDFKASEIEVGVVSKENPEFRVLSIEEIDE 797 TAD R L + R E+ F Y +PV L +ADK+QV TQ ++ RP GV +V +DE G L+ P+G++F ++A + G + Q A +LE+K ++ + ++ ++ AI ++ LQ E K+S V V+ + P F L E I + Sbjct: 78 TADGRVLSRYMRSESINHSFTYESPLPVGRLVVHLADKAQVCTQRSWKRPYGVGLLVGGLDES-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFESFQESSKEDLIKDAIMAIRETLQGETLKSSLCTVSVLGVDEP-FHFLDQESIQK 230
BLAST of CN186095 vs. ExPASy Swiss-Prot
Match: PSA7_YEAST (Proteasome component PRE6 OS=Saccharomyces cerevisiae GN=PRE6 PE=1 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.039e-14 Identity = 51/162 (31.48%), Postives = 87/162 (53.70%), Query Frame = -3 Query: 315 ADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLSID-EECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKM-KNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISE 794 AD+R L+++AR EA R + V+ L +++A Q YTQ +RP GV ++ D + P+L++ +P+G + A + G + FLEK + +P T +E V+ + +L V+Q A IE+ VV K + + LS EEI++++T I + Sbjct: 80 ADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRYTQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYDRKEPPATVEECVKLTVRSLLEVVQTG--AKNIEITVV-KPDSDIVALSSEEINQYVTQIEQ 238 The following BLAST results are available for this feature:
BLAST of CN186095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 146
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN186095 ID=CN186095; Name=CN186095; organism=Citrus sinensis; type=EST; length=799bpback to top |