CN186094

Overview
NameCN186094
Unique NameCN186094
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:5..761. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: TIP32_ORYSJ (Probable aquaporin TIP3-2 OS=Oryza sativa subsp. japonica GN=TIP3-2 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13
Identity = 55/172 (31.98%), Postives = 85/172 (49.42%), Query Frame = 2
Query:  242 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVG-IQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGAN-----VVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIG 739
            RA ++EF+AT +F++ +  +V G+ K      T+G +  +A A    +   V  +   SGGH+NPAVT G+ + R++S  RA  Y   Q LGA+    ++          RLA G        + H   +   L  E++ TF LVYTV++    +RS        +APL IG
Sbjct:   29 RAALSEFVATAVFVFAAEGSVYGLWKMYRDTGTLGGLLVVAVAHALALAAAVAVSRNASGGHVNPAVTFGVLVGRRISFARAALYWAAQLLGAVLAVLLL----------RLASGGMRPMGFTLGHRIHERHALLLEVVMTFGLVYTVYATAVDRRSGGGD----IAPLAIG 186          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: AQP_DROME (Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13
Identity = 52/170 (30.59%), Postives = 84/170 (49.41%), Query Frame = 2
Query:  239 YRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAV 748
            +R  + E + TF  +++ V        S T  S   +  IA+ FG  +  +      +SG HINPAVTLG  +  ++S+ +A FY+++QC+GAI GA V+K  +     G L  G +           +  E + TF+LV+ V + +D  R      +   APL +G A+
Sbjct:   23 WRMLLGELVGTFFLIFVGV-------GSTTSGS---VPQIAFTFGLTVATIAQGLGHLSGCHINPAVTLGFLIVGEISILKAAFYIIVQCVGAIAGAAVIKVALDGVAGGDL--GVSSFDPSLNCAQAVLIEALITFILVFVVKAVSDPGR----QDIKGSAPLAVGLAI 176          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUME (Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13
Identity = 51/145 (35.17%), Postives = 73/145 (50.34%), Query Frame = 2
Query:  341 VGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG------ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV 757
            +G  G+A AFG  +  + Y   GISGGH NPAV+LGL +A +L     + Y V Q LGAI  A ++   + +G+ G  AGG        +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILY-VIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLI 171          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUAB (Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13
Identity = 51/145 (35.17%), Postives = 73/145 (50.34%), Query Frame = 2
Query:  341 VGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG------ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV 757
            +G  G+A AFG  +  + Y   GISGGH NPAV+LGL +A +L     + Y V Q LGAI  A ++   + +G+ G  AGG        +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILY-VIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLI 171          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUA2 (Aquaporin Z OS=Brucella abortus (strain 2308) GN=aqpZ PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.082e-13
Identity = 51/145 (35.17%), Postives = 73/145 (50.34%), Query Frame = 2
Query:  341 VGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG------ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV 757
            +G  G+A AFG  +  + Y   GISGGH NPAV+LGL +A +L     + Y V Q LGAI  A ++   + +G+ G  AGG        +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLGLTVAGRLPAKDLIPYWVAQVLGAIAAAAILY-VIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLI 171          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: TIP43_ORYSJ (Probable aquaporin TIP4-3 OS=Oryza sativa subsp. japonica GN=TIP4-3 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13
Identity = 52/167 (31.14%), Postives = 81/167 (48.50%), Query Frame = 2
Query:  242 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTV-GIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIG 739
            RA +AE + TFLF++  V + M   K      T+ G+  +A A   ++ V+V     +SGGHINPAVTLGL     ++L R+  Y   Q LG+     ++    G    G  A   +  A G      +  E + TF L++ V++    +R A  +  P+L  L +G
Sbjct:   19 RAVVAELLLTFLFVFSGVGSAMAAAKLGGGGDTIMGLTAVAAAHALVVAVMVSAGLHVSGGHINPAVTLGLAAGGHITLFRSALYAAAQLLGSSLACLLLAALTG----GEEAVPVHAPAPGVGAARAVAMEAVLTFSLLFAVYATVVDRRRAVGALGPLLVGLVVG 181          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: AQP6_HUMAN (Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 4.639e-13
Identity = 51/152 (33.55%), Postives = 79/152 (51.97%), Query Frame = 2
Query:  242 RAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSA 697
            RA  AEF+AT L+++  V +VM         +   +  IA  F  +  + V  T   SG H NPAVTL   +   +SL RA+ Y+  Q +GA  GA ++ G M       L  G NVV +  + G  +  E++ T  LV  VF++TD+++++
Sbjct:   25 RALFAEFLATGLYVFFGVGSVM-----RWPTALPSVLQIAITFNLVTAMAVQVTWKASGAHANPAVTLAFLVGSHISLPRAVAYVAAQLVGATVGAALLYGVMPGDIRETL--GINVVRNSVSTGQAVAVELLLTLQLVLCVFASTDSRQTS 169          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: AQPZ_BRUSU (Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.763e-12
Identity = 50/145 (34.48%), Postives = 72/145 (49.66%), Query Frame = 2
Query:  341 VGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG------ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV 757
            +G  G+A AFG  +  + Y   GISGGH NPAV+L L +A +L     + Y V Q LGAI  A ++   + +G+ G  AGG        +   GY+   GL  EII T   +  +  +T +   A        AP+ IGF + L+
Sbjct:   34 IGFLGVALAFGLTVLTMAYAVGGISGGHFNPAVSLSLTVAGRLPAKDLIPYWVAQVLGAIATAAILY-VIASGKDGFSAGGLASNGYGELSPGGYSMMAGLLIEIILTAFFIIIILGSTSSLAPAG------FAPIAIGFGLTLI 171          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: TIP44_MAIZE (Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12
Identity = 57/174 (32.76%), Postives = 86/174 (49.43%), Query Frame = 2
Query:  242 RAGIAEFIATFLFLYISVLTVM--GVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGA------EIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIG 739
            RA +AE I TFLF++  V + M  G +      + VG+  +A A   ++ V+V     +SGGHINPAVTLGL    +++L R+  Y+  Q LG+   A ++  F+     G       V  H    G G+GA      E + TF L++ V++     R A     P+L  L +G
Sbjct:   19 RAVLAELILTFLFVFAGVGSAMATGKLAGGGGDTVVGLTAVALAHTLVVAVMVSAGLHVSGGHINPAVTLGLAATGRITLFRSALYVAAQLLGSTL-ACLLLAFLAVADSG-------VPVHAL--GAGVGALRGVLMEAVLTFSLLFAVYATVVDPRRAVGGMGPLLVGLVVG 182          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: AQY1_YEAST (Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12
Identity = 55/180 (30.56%), Postives = 83/180 (46.11%), Query Frame = 2
Query:  245 AGIAEFIATFLFLYISVLTV------MGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGG----ANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFL 754
            A + EF  TF+FL+ + +        + +V +        +  IA  FG  +   ++C AG+SGG +NPAV+L L LAR +S TR +   V Q         +V G    G    +  G    AN +  G ++  GL  E+ GT +L  TV      KR         +A LPIG ++F+
Sbjct:   51 AAVGEFCGTFMFLWCAYVICNVANHDVALVAAPDGSHPGQLIMIAIGFGFSVMFSIWCFAGVSGGALNPAVSLSLCLARAVSPTRCVVMWVSQ---------IVAGMAAGGAASAMTPGEVLFANSLGLGCSRTRGLFLEMFGTAILCLTVLMTAVEKRETN-----FMAALPIGISLFI 216          
The following BLAST results are available for this feature:
BLAST of CN186094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
TIP32_ORYSJ1.594e-1331.98Probable aquaporin TIP3-2 OS=Oryza sativa subsp. j... [more]
AQP_DROME2.082e-1330.59Aquaporin OS=Drosophila melanogaster GN=Drip PE=1 ... [more]
AQPZ_BRUME2.082e-1335.17Aquaporin Z OS=Brucella melitensis GN=aqpZ PE=3 SV... [more]
AQPZ_BRUAB2.082e-1335.17Aquaporin Z OS=Brucella abortus GN=aqpZ PE=3 SV=1[more]
AQPZ_BRUA22.082e-1335.17Aquaporin Z OS=Brucella abortus (strain 2308) GN=a... [more]
TIP43_ORYSJ4.639e-1331.14Probable aquaporin TIP4-3 OS=Oryza sativa subsp. j... [more]
AQP6_HUMAN4.639e-1333.55Aquaporin-6 OS=Homo sapiens GN=AQP6 PE=2 SV=2[more]
AQPZ_BRUSU1.763e-1234.48Aquaporin Z OS=Brucella suis GN=aqpZ PE=3 SV=1[more]
TIP44_MAIZE2.302e-1232.76Aquaporin TIP4-4 OS=Zea mays GN=TIP4-4 PE=2 SV=1[more]
AQY1_YEAST2.302e-1230.56Aquaporin-1 OS=Saccharomyces cerevisiae GN=AQY1 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F18_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186094 ID=CN186094; Name=CN186094; organism=Citrus sinensis; type=EST; length=758bp
GGGCTGCGGCCCCACATAACGGCCACAACAAAAAAGCAGTGCTTCTTATT
GACTGTTTTGTGCTTTTGAGGGACTAGCAGAAATGGAAGGTAAAGAAGAG
GATGCCTTACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGAC
GGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCACCGGCGC
CGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGGT
ATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGAC
AGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTCGGCATTC
AAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTACTGC
ACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCT
GTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTGA
TGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTTCATG
GGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTCA
TGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTG
TTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGCCAGG
GACTCTCATGTTCCTATTTTGGCTCCTCTGCCAATTGGGTTCGCTGTGTT
TTTGGTTC
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