CN186094

Overview
NameCN186094
Unique NameCN186094
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10242 contig Csv1_Contig10242:5..761. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: PIP24_ARATH (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 4.262e-75
Identity = 140/201 (69.65%), Postives = 157/201 (78.11%), Query Frame = 2
Query:  173 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMG------VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV 757
            +DY +PPPAP F+  EL+ W  YRA IAEF+AT LFLY+S+LTV+G             C  VGI GIAWAFGGMIFVLVYCTAGISGGHINPAVT+GLFLARK+SL R + Y+V QCLGAICG G VK F  +  Y R  GGAN +A GY KG GLGAEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+V
Sbjct:   16 RDYKDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILTVIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTVGLFLARKVSLVRTVLYIVAQCLGAICGCGFVKAFQ-SSYYTRYGGGANELADGYNKGTGLGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMV 215          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: PIP26_ARATH (Probable aquaporin PIP2-6 OS=Arabidopsis thaliana GN=PIP2-6 PE=1 SV=1)

HSP 1 Score: 279.641 bits (714), Expect = 1.240e-74
Identity = 141/210 (67.14%), Postives = 165/210 (78.57%), Query Frame = 2
Query:  149 TAAQTQDGKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTK-------CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV 757
            T  ++  GKDY++PPP   FE  ELK WSFYRA IAEFIAT LFLY++VLTV+G  KS T        C++VG+ GI+WAFGGMIF+LVYCTAGISGGHINPAVT GLFLA K+SL RA+ YMV QCLGA CG G+VK F     Y R  GGAN+++ GY  G G+GAEIIGTFVLVYTVFSATD KR+ARDSH+P+LAPLPIGF+VF+V
Sbjct:    7 TEEESLSGKDYLDPPPVKTFEVRELKKWSFYRAVIAEFIATLLFLYVTVLTVIGF-KSQTDINAGGGACASVGLLGISWAFGGMIFILVYCTAGISGGHINPAVTFGLFLASKVSLVRAVSYMVAQCLGATCGVGLVKVFQST-YYNRYGGGANMLSDGYNVGVGVGAEIIGTFVLVYTVFSATDPKRNARDSHIPVLAPLPIGFSVFMV 214          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: PIP23_ARATH (Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 279.256 bits (713), Expect = 1.620e-74
Identity = 141/201 (70.15%), Postives = 159/201 (79.10%), Query Frame = 2
Query:  173 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGV-VKSNTK-----CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV 757
            +DY +PPP P F+  EL  WS YRA IAEF+AT LFLY++VLTV+G  ++S+TK     C  VGI GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RA+ YMV QCLGAICG G VK F  +  Y    GGAN +A GY  G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+V
Sbjct:   14 RDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGYKIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGFVKAFQ-SSHYVNYGGGANFLADGYNTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMV 213          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: PIP24_ORYSJ (Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica GN=PIP2-4 PE=2 SV=1)

HSP 1 Score: 278.485 bits (711), Expect = 2.763e-74
Identity = 139/203 (68.47%), Postives = 160/203 (78.82%), Query Frame = 2
Query:  173 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMG--------VVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV 757
            +DY++PPPAPL +  EL  WS YRA IAEF+AT LFLY++V TV+G        V  ++  C  VG+ GIAWAFGGMIF+LVYCTAG+SGGHINPAVTLGLFLARK+SL RAL YM  QCLGAICG  +VKGF  +  Y R  GGAN +A GY+ G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+V
Sbjct:   16 RDYIDPPPAPLVDVDELGKWSLYRALIAEFVATLLFLYVTVATVIGYKHQTDAAVNGADAACGGVGVLGIAWAFGGMIFILVYCTAGVSGGHINPAVTLGLFLARKVSLVRALLYMAAQCLGAICGVALVKGFQ-SSLYDRYGGGANELAAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMV 217          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: PIP23_ORYSJ (Probable aquaporin PIP2-3 OS=Oryza sativa subsp. japonica GN=PIP2-3 PE=2 SV=1)

HSP 1 Score: 277.715 bits (709), Expect = 4.712e-74
Identity = 145/217 (66.82%), Postives = 165/217 (76.04%), Query Frame = 2
Query:  143 IGTAAQTQDG----KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVK--------SNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV 757
            I  AA  + G    KDY +PPPAPL +  EL  WS YRA IAEF+AT LFLYI+V TV+G           ++  CS VGI GIAWAFGGMIF+LVYCTAG+SGGHINPAVT GLFLARK+SL RA+ Y+V Q LGAICG G+VKGF  A  Y R  GGAN ++ GY+KG GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+V
Sbjct:    5 IEAAAAAEGGEYMAKDYSDPPPAPLIDAEELTKWSLYRAVIAEFVATLLFLYITVATVIGYKHQSDPGANAADAACSGVGILGIAWAFGGMIFILVYCTAGVSGGHINPAVTFGLFLARKVSLVRAVLYIVAQSLGAICGVGLVKGFQSA-FYVRYGGGANELSDGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMV 220          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: PIP25_ARATH (Probable aquaporin PIP2-5 OS=Arabidopsis thaliana GN=PIP2-5 PE=1 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 8.038e-74
Identity = 140/203 (68.97%), Postives = 162/203 (79.80%), Query Frame = 2
Query:  170 GKDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNT-------KCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV 757
            GKDY +PPP PLF+  EL  WSFYRA IAEFIAT LFLY++++TV+G  KS T       +C+ VG+ GIAWAFGGMIF+LVYCTAGISGGHINPAVT GL LARK++L RA+ YMV QCLGAICG  +VK F  A  + R  GGAN ++ GY+ G G+ AEIIGTFVLVYTVFSATD KRSARDSHVP+LAPLPIGFAVF+V
Sbjct:   14 GKDYQDPPPEPLFDATELGKWSFYRALIAEFIATLLFLYVTIMTVIGY-KSQTDPALNPDQCTGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLLARKVTLVRAVMYMVAQCLGAICGVALVKAFQSA-YFTRYGGGANGLSDGYSIGTGVAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFIV 214          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: PIP26_MAIZE (Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.791e-73
Identity = 141/203 (69.46%), Postives = 157/203 (77.34%), Query Frame = 2
Query:  173 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS--------NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV 757
            +DY +PPPAPL +  EL  WS YRA IAEF+AT LFLYI+V TV+G            +  CS VGI GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RAL YM  Q LGAICG  +VKGF  +G Y R  GGAN V+ GY+ G GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+V
Sbjct:   18 RDYADPPPAPLIDIDELGKWSLYRAVIAEFVATLLFLYITVATVIGYKHQTDASASGPDAACSGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRALLYMAAQSLGAICGVALVKGFQ-SGFYARYGGGANEVSAGYSTGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMV 219          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: PIP25_ORYSJ (Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica GN=PIP2-5 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.054e-73
Identity = 140/215 (65.12%), Postives = 163/215 (75.81%), Query Frame = 2
Query:  143 IGTAAQTQDG--KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKS--------NTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV 757
            +G  A  + G  +DY +PPPAPL +  EL  WS YRA IAEF+AT LFLY++V TV+G            +  C  VG+ GIAWAFGGMIF+LVYCTAGISGGHINPAVT GLFLARK+SL RA+ Y+V QCLGA+CG  +VKGF  +  Y R  GGAN +A GY+KG GL AEIIGTFVLVYTVFSATD KR+ARDSHVP+LAPLPIGFAVF+V
Sbjct:    1 MGKEADVEAGGVRDYEDPPPAPLVDIDELGRWSLYRAVIAEFVATLLFLYVTVATVIGYKHQTDASASGDDAACGGVGVLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAILYIVAQCLGAVCGVALVKGFQ-SSFYDRYGGGANELAAGYSKGTGLAAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMV 214          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: PIP28_ORYSJ (Probable aquaporin PIP2-8 OS=Oryza sativa subsp. japonica GN=PIP2-8 PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 9.517e-67
Identity = 124/195 (63.59%), Postives = 149/195 (76.41%), Query Frame = 2
Query:  173 KDYVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTKCSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV 757
            KDY +PPPAPL + GEL  WS YRA IAEF AT L + ISV TV+G  + + +    G+ GIAWAFGG+IFVLVYCTAGISGGH+NPAVT  + LAR++SL RA  Y + QC+GA+CGAG+ +   G GQY R  GGAN +A GY+ G G+ AE++GTFVLVYTVFSATD KR ARDSHVP+LAPLPIG AV +V
Sbjct:   12 KDYQDPPPAPLVDTGELGKWSLYRAAIAEFTATLLLVCISVSTVIGEKRQSGE-GGAGVLGIAWAFGGLIFVLVYCTAGISGGHMNPAVTFAMVLARRVSLPRAALYTMAQCVGAVCGAGLARAMHGGGQYARHGGGANELAAGYSAGAGVVAEMVGTFVLVYTVFSATDPKRKARDSHVPVLAPLPIGLAVLVV 205          
BLAST of CN186094 vs. ExPASy Swiss-Prot
Match: PIP27_ORYSJ (Probable aquaporin PIP2-7 OS=Oryza sativa subsp. japonica GN=PIP2-7 PE=2 SV=2)

HSP 1 Score: 252.292 bits (643), Expect = 2.120e-66
Identity = 124/196 (63.27%), Postives = 146/196 (74.49%), Query Frame = 2
Query:  179 YVEPPPAPLFEPGELKSWSFYRAGIAEFIATFLFLYISVLTVMGVVKSNTK---CSTVGIQGIAWAFGGMIFVLVYCTAGISGGHINPAVTLGLFLARKLSLTRALFYMVMQCLGAICGAGVVKGFMGAGQYGRLAGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLV 757
            Y +PPPAPL +  EL  WS YRA IAEF+AT +FLY+S+ TV+G          C+ VG  G+AW+FG  IFVLVYCT G+SGGHINPAVTLGLF  RKLSL R + Y+V QCLGAI GAG+VKG M    Y  L GGAN V+ GY+    LGAEI+GTF+LVYTVFSATD KR+ARDS +P+L PLPIGFAVF+V
Sbjct:   23 YWDPPPAPLLDTSELGKWSLYRALIAEFMATLIFLYVSIATVIGYKNQRATVDACTGVGYLGVAWSFGATIFVLVYCTGGVSGGHINPAVTLGLFFGRKLSLVRTVLYVVAQCLGAIAGAGIVKGIM-KRPYDALGGGANTVSDGYSAAGALGAEIVGTFILVYTVFSATDPKRTARDSFIPVLVPLPIGFAVFVV 217          
The following BLAST results are available for this feature:
BLAST of CN186094 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 138
Match NameE-valueIdentityDescription
PIP24_ARATH4.262e-7569.65Probable aquaporin PIP2-4 OS=Arabidopsis thaliana ... [more]
PIP26_ARATH1.240e-7467.14Probable aquaporin PIP2-6 OS=Arabidopsis thaliana ... [more]
PIP23_ARATH1.620e-7470.15Aquaporin PIP2-3 OS=Arabidopsis thaliana GN=PIP2-3... [more]
PIP24_ORYSJ2.763e-7468.47Aquaporin PIP2-4 OS=Oryza sativa subsp. japonica G... [more]
PIP23_ORYSJ4.712e-7466.82Probable aquaporin PIP2-3 OS=Oryza sativa subsp. j... [more]
PIP25_ARATH8.038e-7468.97Probable aquaporin PIP2-5 OS=Arabidopsis thaliana ... [more]
PIP26_MAIZE1.791e-7369.46Aquaporin PIP2-6 OS=Zea mays GN=PIP2-6 PE=2 SV=1[more]
PIP25_ORYSJ3.054e-7365.12Aquaporin PIP2-5 OS=Oryza sativa subsp. japonica G... [more]
PIP28_ORYSJ9.517e-6763.59Probable aquaporin PIP2-8 OS=Oryza sativa subsp. j... [more]
PIP27_ORYSJ2.120e-6663.27Probable aquaporin PIP2-7 OS=Oryza sativa subsp. j... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F18_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186094 ID=CN186094; Name=CN186094; organism=Citrus sinensis; type=EST; length=758bp
GGGCTGCGGCCCCACATAACGGCCACAACAAAAAAGCAGTGCTTCTTATT
GACTGTTTTGTGCTTTTGAGGGACTAGCAGAAATGGAAGGTAAAGAAGAG
GATGCCTTACTGGGAGCCAACAAGTTCGCCGAGAGGCAGCCGATTGGGAC
GGCGGCTCAGACCCAAGATGGGAAGGACTACGTTGAGCCCCCACCGGCGC
CGCTCTTTGAGCCCGGCGAGCTCAAGTCTTGGTCGTTTTACAGGGCCGGT
ATAGCCGAGTTCATAGCCACTTTTCTTTTCTTGTACATCTCCGTACTGAC
AGTGATGGGCGTCGTCAAGTCCAATACCAAGTGCTCAACCGTCGGCATTC
AAGGGATTGCATGGGCCTTCGGTGGCATGATCTTCGTGCTCGTTTACTGC
ACAGCTGGCATCTCGGGTGGTCATATCAACCCGGCGGTGACACTCGGCCT
GTTCTTGGCGAGGAAGCTGTCGCTGACACGTGCACTTTTCTACATGGTGA
TGCAGTGTCTGGGAGCCATCTGCGGTGCTGGCGTTGTAAAGGGTTTCATG
GGTGCCGGCCAATACGGGCGGCTCGCCGGCGGTGCCAACGTCGTAGCTCA
TGGCTACACCAAGGGTGATGGTCTTGGTGCCGAGATTATTGGTACTTTTG
TTCTTGTCTACACAGTTTTCTCTGCCACTGATGCCAAACGGAGCGCCAGG
GACTCTCATGTTCCTATTTTGGCTCCTCTGCCAATTGGGTTCGCTGTGTT
TTTGGTTC
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