CN186089

Overview
NameCN186089
Unique NameCN186089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length737
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2799 contig Csv1_Contig2799:17..753. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186089 vs. ExPASy Swiss-Prot
Match: IF5A2_YEAST (Eukaryotic translation initiation factor 5A-2 OS=Saccharomyces cerevisiae GN=HYP2 PE=1 SV=3)

HSP 1 Score: 191.815 bits (486), Expect = 3.228e-48
Identity = 94/155 (60.65%), Postives = 123/155 (79.35%), Query Frame = 1
Query:   70 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKD 534
            MSDEEH FE+ ADAG+S TYP Q   +RKNG++VIKSRPCK+V++STSKTGKHGHAK H V IDIF+GKKLED+ PS+HN +VP V R +YQL+DI +DGF+SL+  +G+TKDD++ P  E L   L+  F EGKDL++T++S+MGEE   + K+
Sbjct:    1 MSDEEHTFET-ADAGSSATYPMQCSALRKNGFVVIKSRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLSPSTHNMEVPVVKRNEYQLLDI-DDGFLSLMNMDGDTKDDVKAPEGE-LGDSLQTAFDEGKDLMVTIISAMGEEAAISFKE 152          
BLAST of CN186089 vs. ExPASy Swiss-Prot
Match: IF5A_SPOFR (Eukaryotic translation initiation factor 5A OS=Spodoptera frugiperda GN=eIF-5A PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.216e-48
Identity = 89/151 (58.94%), Postives = 119/151 (78.81%), Query Frame = 1
Query:   79 EEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 531
            E+ HFE+  D+GAS T+P Q   +RKNG++++K RPCK+VE+STSKTGKHGHAK H VGIDIF+GKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ +NG+ ++DL++P D  L TQL+  F  GK+L+ TV+ S GEE + A+K
Sbjct:    5 EDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRSDFDSGKELLCTVLKSCGEECVIAVK 153          
BLAST of CN186089 vs. ExPASy Swiss-Prot
Match: IF5A_SPOEX (Eukaryotic translation initiation factor 5A OS=Spodoptera exigua GN=eIF-5A PE=2 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 4.216e-48
Identity = 89/151 (58.94%), Postives = 119/151 (78.81%), Query Frame = 1
Query:   79 EEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 531
            E+ HFE+  D+GAS T+P Q   +RKNG++++K RPCK+VE+STSKTGKHGHAK H VGIDIF+GKK EDI PS+HN DVPHV R DYQL DIS+DG+++L+ +NG+ ++DL++P D  L TQL+  F  GK+L+ TV+ S GEE + A+K
Sbjct:    5 EDTHFET-GDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFNGKKYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIP-DGDLGTQLRSDFDSGKELLCTVLKSCGEECVIAVK 153          
BLAST of CN186089 vs. ExPASy Swiss-Prot
Match: IF5A1_YEAST (Eukaryotic translation initiation factor 5A-1 OS=Saccharomyces cerevisiae GN=HYP1 PE=1 SV=3)

HSP 1 Score: 190.66 bits (483), Expect = 7.192e-48
Identity = 94/160 (58.75%), Postives = 126/160 (78.75%), Query Frame = 1
Query:   70 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKDIGPKS 549
            MSDEEH FE+ ADAGAS TYP Q   +RKNG++VIK RPCK+V++STSKTGKHGHAK H V +DIF+GKKLED+ PS+HN +VP V R++YQL+DI +DG++SL+T +G TKDD++ P  E L   ++  F EGKDL++T++S+MGEE   + K+  P+S
Sbjct:    1 MSDEEHTFEN-ADAGASATYPMQCSALRKNGFVVIKGRPCKIVDMSTSKTGKHGHAKVHLVTLDIFTGKKLEDLSPSTHNLEVPFVKRSEYQLLDI-DDGYLSLMTMDGETKDDVKAPEGE-LGDSMQAAFDEGKDLMVTIISAMGEEAAISFKE-APRS 156          
BLAST of CN186089 vs. ExPASy Swiss-Prot
Match: IF5A2_SCHPO (Eukaryotic translation initiation factor 5A-2 OS=Schizosaccharomyces pombe GN=tif51b PE=2 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 6.731e-46
Identity = 87/155 (56.13%), Postives = 121/155 (78.06%), Query Frame = 1
Query:   70 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKD 534
            M++EEH      +AGAS T+P Q   +RKNG++VIK RPCK+V++STSKTGKHGHAK H V +DIF+G+K ED+ PS+HN DVP V R +YQL++I +DG+++L+T +G TKDD+RLP  E L  ++++GF EGKDL++TV+S+MGEE   A +D
Sbjct:    1 MAEEEHVDFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHIVALDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGE-LGNEIEEGFEEGKDLIITVVSAMGEEIALACRD 153          
BLAST of CN186089 vs. ExPASy Swiss-Prot
Match: IF5A1_SCHPO (Eukaryotic translation initiation factor 5A-1 OS=Schizosaccharomyces pombe GN=tif51a PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.148e-45
Identity = 86/155 (55.48%), Postives = 121/155 (78.06%), Query Frame = 1
Query:   70 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKD 534
            M++EEH      +AGAS T+P Q   +RKNG++VIK RPCK+V++STSKTGKHGHAK H V +DIF+G+K ED+ PS+HN DVP V R +YQL++I +DG+++L+T +G TKDD+RLP  E L  ++++GF EG+DL++TV+S+MGEE   A +D
Sbjct:    1 MAEEEHVDFEGGEAGASLTFPMQCSALRKNGHVVIKGRPCKIVDMSTSKTGKHGHAKVHIVALDIFNGRKYEDMSPSTHNMDVPVVKRDEYQLVNI-DDGYLNLMTTDGTTKDDVRLPEGE-LGNEIEEGFDEGRDLIITVVSAMGEETALACRD 153          
BLAST of CN186089 vs. ExPASy Swiss-Prot
Match: IF5A_CANAL (Eukaryotic translation initiation factor 5A OS=Candida albicans GN=ANB1 PE=3 SV=1)

HSP 1 Score: 181.415 bits (459), Expect = 4.363e-45
Identity = 87/152 (57.24%), Postives = 124/152 (81.58%), Query Frame = 1
Query:   79 EEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALKD 534
            EE  FE+ ADAGA+ T+P Q   +RKNG++VIK+RPCK+V++STSKTGKHGHAK H V IDIF+GKKLED+ PS+HN +VP+V+R ++QL+DI +DG++SL+T +G+TKDD+++P  E L  +L+  F EGKDL++T++S+MGEE   + K+
Sbjct:    3 EEDTFET-ADAGAALTFPMQCSALRKNGHVVIKNRPCKIVDMSTSKTGKHGHAKVHLVAIDIFTGKKLEDLSPSTHNMEVPNVSRQEFQLLDI-DDGYLSLMTADGDTKDDVKVPEGE-LGDKLQSEFDEGKDLIVTIISAMGEEAAISYKE 151          
BLAST of CN186089 vs. ExPASy Swiss-Prot
Match: IF5A_DROME (Eukaryotic translation initiation factor 5A OS=Drosophila melanogaster GN=eIF-5A PE=1 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 9.720e-45
Identity = 88/154 (57.14%), Postives = 118/154 (76.62%), Query Frame = 1
Query:   70 MSDEEHHFESKADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 531
            M++ +  FE+  D+GAS TYP Q   +RKNG++++KSRPCK+VE+STSKTGKHGHAK H VGIDIFS KK EDI PS+HN DVP+V R D QLI IS+D F++L+TE+G+ ++DL++P  E L  QL+  F  GKDL+ TV+ + GEE + A+K
Sbjct:    1 MAELDDQFET-TDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHMVGIDIFSNKKYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGE-LGEQLRLDFDSGKDLLCTVLKACGEECVIAIK 152          
BLAST of CN186089 vs. ExPASy Swiss-Prot
Match: IF5A2_PONAB (Eukaryotic translation initiation factor 5A-2 OS=Pongo abelii GN=EIF5A2 PE=2 SV=3)

HSP 1 Score: 172.94 bits (437), Expect = 1.552e-42
Identity = 83/142 (58.45%), Postives = 109/142 (76.76%), Query Frame = 1
Query:  106 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 531
            DAGAS TYP Q   +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF+GKK EDI PS+HN DVP++ R DYQLI I +DG++SLLTE G  ++DL+LP  E L  +++  +  G+D+ ++VM +M EE   A+K
Sbjct:   11 DAGASSTYPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDYQLICI-QDGYLSLLTETGEVREDLKLPEGE-LGKEIEGKYNAGEDVQVSVMCAMSEEYAVAIK 150          
BLAST of CN186089 vs. ExPASy Swiss-Prot
Match: IF5A2_MOUSE (Eukaryotic translation initiation factor 5A-2 OS=Mus musculus GN=Eif5a2 PE=2 SV=3)

HSP 1 Score: 172.94 bits (437), Expect = 1.552e-42
Identity = 83/142 (58.45%), Postives = 109/142 (76.76%), Query Frame = 1
Query:  106 DAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVGIDIFSGKKLEDIVPSSHNCDVPHVNRTDYQLIDISEDGFVSLLTENGNTKDDLRLPTDETLLTQLKDGFAEGKDLVLTVMSSMGEEQICALK 531
            DAGAS TYP Q   +RKNG++V+K RPCK+VE+STSKTGKHGHAK H VGIDIF+GKK EDI PS+HN DVP++ R DYQLI I +DG++SLLTE G  ++DL+LP  E L  +++  +  G+D+ ++VM +M EE   A+K
Sbjct:   11 DAGASSTYPMQCSALRKNGFVVLKGRPCKIVEMSTSKTGKHGHAKVHLVGIDIFTGKKYEDICPSTHNMDVPNIKRNDYQLICI-QDGYLSLLTETGEVREDLKLPEGE-LGKEIEGKYNAGEDVQVSVMCAMSEEYAVAIK 150          
The following BLAST results are available for this feature:
BLAST of CN186089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
IF5A2_YEAST3.228e-4860.65Eukaryotic translation initiation factor 5A-2 OS=S... [more]
IF5A_SPOFR4.216e-4858.94Eukaryotic translation initiation factor 5A OS=Spo... [more]
IF5A_SPOEX4.216e-4858.94Eukaryotic translation initiation factor 5A OS=Spo... [more]
IF5A1_YEAST7.192e-4858.75Eukaryotic translation initiation factor 5A-1 OS=S... [more]
IF5A2_SCHPO6.731e-4656.13Eukaryotic translation initiation factor 5A-2 OS=S... [more]
IF5A1_SCHPO1.148e-4555.48Eukaryotic translation initiation factor 5A-1 OS=S... [more]
IF5A_CANAL4.363e-4557.24Eukaryotic translation initiation factor 5A OS=Can... [more]
IF5A_DROME9.720e-4557.14Eukaryotic translation initiation factor 5A OS=Dro... [more]
IF5A2_PONAB1.552e-4258.45Eukaryotic translation initiation factor 5A-2 OS=P... [more]
IF5A2_MOUSE1.552e-4258.45Eukaryotic translation initiation factor 5A-2 OS=M... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F14_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F14, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186089 ID=CN186089; Name=CN186089; organism=Citrus sinensis; type=EST; length=737bp
CGTTCCCAGGCTATCTCAAAATCTCGCTCAGTAAATCGGCCGAGTCGGAA
TCAGTCAGTGCTTAAAGCGATGTCGGACGAGGAGCATCACTTCGAGTCAA
AGGCCGATGCCGGAGCCTCCAAGACTTACCCACAGCAAGCTGGTACCATC
CGTAAGAACGGCTACATCGTCATCAAAAGCCGTCCCTGCAAGGTTGTGGA
AGTCTCCACCTCCAAGACTGGAAAGCACGGTCATGCTAAGTGCCACTTTG
TTGGAATTGATATCTTCAGTGGAAAGAAGCTGGAAGATATTGTCCCCTCT
TCTCATAACTGTGATGTTCCCCATGTCAACCGTACCGACTATCAGTTGAT
TGATATTTCTGAGGATGGATTTGTGAGTTTGCTGACTGAAAATGGGAACA
CCAAGGATGATCTGAGGCTCCCAACCGATGAGACTCTGCTGACCCAGCTC
AAGGACGGTTTTGCTGAGGGGAAGGACTTGGTTTTGACTGTCATGTCTTC
AATGGGCGAGGAGCAGATCTGTGCCCTCAAGGATATTGGCCCAAAGTCGT
AGTTGCGCGATATGTGATTATCTTCTGTGTCTGGTTGCATCTGTTTTTTG
GAAAAATATTTTAATCATCTAGAGTTTGCCTTTAATATTTGTAGCGTCTT
TGTTTTGTGGTGAGAATTGCAAGCTGCCTGGAATATGTAGTTCTTTTGAT
TGGCGGCTAAAAAATTTATGGTGTTCAATTTCTCTAA
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