CN186086 | Citrus Genome Database

Overview


Name	CN186086
Unique Name	CN186086
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	711

Libraries


Library Name	Type
Washington Navel Orange Stored Fruit Pulp cDNA Library	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Alignments

Feature Name	Type	Location	Analysis
Csv1_Contig9569	contig	Csv1_Contig9569:4..714.	BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1

Homology

[Close]

BLAST of CN186086 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.118e-33
Identity = 71/76 (93.42%), Postives = 74/76 (97.37%), Query Frame = 3

Query:  285 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 512
            MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 140.198 bits (352), Expect = 1.051e-32
Identity = 70/76 (92.11%), Postives = 73/76 (96.05%), Query Frame = 3

Query:   57 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLTGG 284
            MQIFVKTLTGKTI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRL GG
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 121.324 bits (303), Expect = 5.052e-27
Identity = 60/66 (90.91%), Postives = 63/66 (95.45%), Query Frame = 3

Query:  513 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 710
            MQIFVKTLTGKTI LEVE SDTI+NVKAKI DKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKEST
Sbjct:    1 MQIFVKTLTGKTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKEST 66

[Close]

BLAST of CN186086 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 6.812e-32
Identity = 69/76 (90.79%), Postives = 72/76 (94.74%), Query Frame = 3

Query:  285 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 512
            MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 2 Score: 135.191 bits (339), Expect = 3.381e-31
Identity = 68/76 (89.47%), Postives = 71/76 (93.42%), Query Frame = 3

Query:   57 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLTGG 284
            MQIFVKTLTG TI LEVE SDTI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRL GG
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76

HSP 3 Score: 116.316 bits (290), Expect = 1.625e-25
Identity = 58/66 (87.88%), Postives = 61/66 (92.42%), Query Frame = 3

Query:  513 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 710
            MQIFVKTLTG TI LEVE SDTI+NVKAKI DKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKEST
Sbjct:    1 MQIFVKTLTGTTIALEVEPSDTIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKEST 66

[Close]

BLAST of CN186086 vs. ExPASy Swiss-Prot
Match: UBIL_NPVOP (Ubiquitin-like protein OS=Orgyia pseudotsugata multicapsid polyhedrosis virus GN=V-UBI PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.499e-28
Identity = 61/76 (80.26%), Postives = 67/76 (88.16%), Query Frame = 3

Query:  285 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 512
            MQIFVKTLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

HSP 2 Score: 122.865 bits (307), Expect = 1.736e-27
Identity = 60/76 (78.95%), Postives = 66/76 (86.84%), Query Frame = 3

Query:   57 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLTGG 284
            MQIFVKTLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKESTLH+VLRL GG
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKESTLHMVLRLRGG 76

HSP 3 Score: 106.301 bits (264), Expect = 1.682e-22
Identity = 52/66 (78.79%), Postives = 57/66 (86.36%), Query Frame = 3

Query:  513 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 710
            MQIFVKTLTGKTIT+E E  DT+  VK KI DKEG+P DQQRLI+AGKQLED +TLADYNIQKEST
Sbjct:    1 MQIFVKTLTGKTITVETEPGDTVGQVKQKIADKEGVPVDQQRLIYAGKQLEDAQTLADYNIQKEST 66

[Close]

BLAST of CN186086 vs. ExPASy Swiss-Prot
Match: UBIL_NPVAC (Ubiquitin-like protein OS=Autographa californica nuclear polyhedrosis virus GN=V-UBI PE=3 SV=2)

HSP 1 Score: 122.479 bits (306), Expect = 2.268e-27
Identity = 58/76 (76.32%), Postives = 68/76 (89.47%), Query Frame = 3

Query:  285 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 512
            MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRLRGG
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

HSP 2 Score: 120.168 bits (300), Expect = 1.125e-26
Identity = 57/76 (75.00%), Postives = 67/76 (88.16%), Query Frame = 3

Query:   57 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLTGG 284
            MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKESTLH+VLRL GG
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKESTLHMVLRLRGG 76

HSP 3 Score: 103.605 bits (257), Expect = 1.090e-21
Identity = 49/66 (74.24%), Postives = 58/66 (87.88%), Query Frame = 3

Query:  513 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 710
            MQIF+KTLTGKTIT E E ++T+ ++K KI DKEG+P DQQRLIFAGKQLED +T+ADYNIQKEST
Sbjct:    1 MQIFIKTLTGKTITAETEPAETVADLKQKIADKEGVPVDQQRLIFAGKQLEDSKTMADYNIQKEST 66

[Close]

BLAST of CN186086 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 8.617e-27
Identity = 60/63 (95.24%), Postives = 62/63 (98.41%), Query Frame = 3

Query:  318 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 506
            TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63

HSP 2 Score: 118.627 bits (296), Expect = 3.275e-26
Identity = 59/62 (95.16%), Postives = 61/62 (98.39%), Query Frame = 3

Query:   90 TITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRL 275
            TITLEVE SDTI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRL
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 62

HSP 3 Score: 103.99 bits (258), Expect = 8.347e-22
Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 3

Query:  546 TITLEVESSDTIDNVKAKIHDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST 710
            TITLEVE SDTI+NVKAKI DKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKEST
Sbjct:    1 TITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKEST 55

[Close]

BLAST of CN186086 vs. ExPASy Swiss-Prot
Match: RUB1_DESAN (NEDD8-like protein RUB1 OS=Deschampsia antarctica GN=RUB1 PE=2 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20
Identity = 48/74 (64.86%), Postives = 59/74 (79.73%), Query Frame = 3

Query:  291 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 512
            I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 97.0561 bits (240), Expect = 1.020e-19
Identity = 47/74 (63.51%), Postives = 58/74 (78.38%), Query Frame = 3

Query:   63 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLTGG 284
            I VKTLTGK I +++E +DTID VK ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL L GG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 81.6481 bits (200), Expect = 4.436e-15
Identity = 38/60 (63.33%), Postives = 48/60 (80.00%), Query Frame = 3

Query:  519 IFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 698
            I VKTLTGK I +++E +DTID VK ++ +KEGIPP QQRLI+AGKQL D +T  DYNI+
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRVKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 62

[Close]

BLAST of CN186086 vs. ExPASy Swiss-Prot
Match: RUB2_ORYSJ (NEDD8-like protein RUB2 OS=Oryza sativa subsp. japonica GN=RUB2 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.685e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 3

Query:  291 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 512
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 96.6709 bits (239), Expect = 1.333e-19
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 3

Query:   63 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLTGG 284
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL L GG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 81.2629 bits (199), Expect = 5.794e-15
Identity = 37/60 (61.67%), Postives = 48/60 (80.00%), Query Frame = 3

Query:  519 IFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 698
            I VKTLTGK I +++E +DTID +K ++ +KEGIPP QQRLI+AGKQL D +T  DYNI+
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 62

[Close]

BLAST of CN186086 vs. ExPASy Swiss-Prot
Match: RUB1_ORYSJ (NEDD8-like protein RUB1 OS=Oryza sativa subsp. japonica GN=RUB1 PE=3 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.685e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 3

Query:  291 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 512
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 96.6709 bits (239), Expect = 1.333e-19
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 3

Query:   63 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLTGG 284
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL L GG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 81.2629 bits (199), Expect = 5.794e-15
Identity = 37/60 (61.67%), Postives = 48/60 (80.00%), Query Frame = 3

Query:  519 IFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 698
            I VKTLTGK I +++E +DTID +K ++ +KEGIPP QQRLI+AGKQL D +T  DYNI+
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 62

[Close]

BLAST of CN186086 vs. ExPASy Swiss-Prot
Match: RUB1_ARATH (NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN=RUB1 PE=1 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.685e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 3

Query:  291 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 512
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL LRGG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 2 Score: 96.6709 bits (239), Expect = 1.333e-19
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 3

Query:   63 IFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLTGG 284
            I VKTLTGK I +++E +DTID +K ++++KEGIPP QQRLI+AGKQL D +T  DYNI+  S LHLVL L GG
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGG 76

HSP 3 Score: 81.2629 bits (199), Expect = 5.794e-15
Identity = 37/60 (61.67%), Postives = 48/60 (80.00%), Query Frame = 3

Query:  519 IFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 698
            I VKTLTGK I +++E +DTID +K ++ +KEGIPP QQRLI+AGKQL D +T  DYNI+
Sbjct:    3 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 62

[Close]

BLAST of CN186086 vs. ExPASy Swiss-Prot
Match: NEDD8_DROME (NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.685e-20
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 3

Query:  285 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQI 521
            M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q  S LHLVL LRGG  I
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79

HSP 2 Score: 96.6709 bits (239), Expect = 1.333e-19
Identity = 45/79 (56.96%), Postives = 59/79 (74.68%), Query Frame = 3

Query:   57 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLTGGMQI 293
            M I VKTLTGK I +++E +D +D +K ++++KEGIPP QQRLIF+GKQ+ D +T ADY +Q  S LHLVL L GG  I
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQGGSVLHLVLALRGGDSI 79

HSP 3 Score: 80.8777 bits (198), Expect = 7.567e-15
Identity = 35/62 (56.45%), Postives = 48/62 (77.42%), Query Frame = 3

Query:  513 MQIFVKTLTGKTITLEVESSDTIDNVKAKIHDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQ 698
            M I VKTLTGK I +++E +D +D +K ++ +KEGIPP QQRLIF+GKQ+ D +T ADY +Q
Sbjct:    1 MLIKVKTLTGKEIEIDIEPTDKVDRIKERVEEKEGIPPQQQRLIFSGKQMNDDKTAADYKVQ 62

The following BLAST results are available for this feature:

BLAST of CN186086 vs. ExPASy Swiss-Prot

BLAST of CN186086 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99


Match Name	E-value	Identity	Description
UBIQ_LEIMA	2.118e-33	93.42	Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1	[more]
UBIQ_LEITA	6.812e-32	90.79	Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3...	[more]
UBIL_NPVOP	3.499e-28	80.26	Ubiquitin-like protein OS=Orgyia pseudotsugata mul...	[more]
UBIL_NPVAC	2.268e-27	76.32	Ubiquitin-like protein OS=Autographa californica n...	[more]
UBIQ_LUMTE	8.617e-27	95.24	Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 ...	[more]
RUB1_DESAN	2.056e-20	64.86	NEDD8-like protein RUB1 OS=Deschampsia antarctica ...	[more]
RUB2_ORYSJ	2.685e-20	63.51	NEDD8-like protein RUB2 OS=Oryza sativa subsp. jap...	[more]
RUB1_ORYSJ	2.685e-20	63.51	NEDD8-like protein RUB1 OS=Oryza sativa subsp. jap...	[more]
RUB1_ARATH	2.685e-20	63.51	NEDD8-like protein RUB1 OS=Arabidopsis thaliana GN...	[more]
NEDD8_DROME	2.685e-20	58.23	NEDD8 OS=Drosophila melanogaster GN=Nedd8 PE=1 SV=...	[more]

Pages

Properties


Property Name	Value
Genbank description	UCRCS05_0002F12_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F12, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CN186086 ID=CN186086; Name=CN186086; organism=Citrus sinensis; type=EST; length=711bp
AGGATTATCTTCACCTTTAATTCGATAAAAGGCCTCCTTCTGTTCTCTCT
GTCAAGATGCAAATCTTTGTGAAAACTCTCACCGGCAAGACAATAACCCT
TGAGGTTGAAAGCTCCGACACCATTGATAATGTAAAAGCCAAGATCCAGG
ACAAGGAAGGGATCCCACCAGATCAGCAGAGGCTTATCTTTGCTGGTAAA
CAGCTCGAGGATGGTCGCACACTCGCTGACTATAATATCCAGAAGGAATC
AACCCTCCACTTGGTCCTTCGACTTACGGGTGGTATGCAGATCTTTGTAA
AGACCCTCACTGGCAAGACGATTACTCTTGAGGTGGAAAGCTCCGACACC
ATTGACAATGTGAAAGCCAAGATTCAAGACAAGGAAGGGATCCCACCAGA
CCAACAGAGGCTTATCTTTGCTGGTAAACAGCTTGAGGATGGTCGCACAC
TTGCTGATTATAACATCCAGAAGGAGTCAACCCTCCACTTGGTCCTCCGT
CTCCGTGGTGGTATGCAGATCTTTGTAAAGACCCTCACTGGAAAGACTAT
CACCCTTGAGGTGGAAAGCTCCGACACCATTGACAATGTCAAAGCCAAAA
TTCACGATAAGGAAGGGATCCCACCAGACCAGCAAAGGCTCATCTTTGCC
GGTAAACAACTAGAGGATGGACGCACACTTGCAGACTACAACATCCAGAA
GGAATCAACCC