CN186084
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PSMR_ARCFU (Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus GN=pan PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.095e-32 Identity = 79/198 (39.90%), Postives = 114/198 (57.58%), Query Frame = 1 Query: 145 GEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSR-------VRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 G+ QY L+ + +L+ + RLE ++ + S VR L+ E++ L+ P VG V ++ +V+VK K+VV P RVAL + + +LP+ DP+V +VE+ P+ +Y+ IGGLD QI+EI+E +ELP+ PELF +GI PKGVLLYGPPGTGKTLLA+AVA+ T Sbjct: 2 GDSEIQYLLEKLKKLEEDYYKLRELYRRLEDEKKFIESERIRYEREVRRLRSEVERLRSPPLLVGVVSDILEDGRVVVKSSTGPKFVVNTSQYINEEELKPGARVALNQQTLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVGIEPPKGVLLYGPPGTGKTLLAKAVANQT 199
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PSMR_METHJ (Proteasome-activating nucleotidase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pan PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.421e-31 Identity = 72/178 (40.45%), Postives = 102/178 (57.30%), Query Frame = 1 Query: 184 ELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 EL+ Q+RQ + +E Q+ VR LK E++ L+ P VG + ++ +V+V+ +++V R L S + +LPS D V M++ P TY+ IGGL++QI EI+E +ELP+ P+LFE +GI PKGVLLYGPPGTGKTLLA+AVAH T Sbjct: 34 ELKEQIRQLESDKRYIETQKIRYEREVRKLKSEIEHLKTPPLIVGTITDIIDSGRVVVRSSAGPRFLVRVSQAVNPTTLKAGVRCTLNQQSLAIVEVLPSTYDSQVYGMELVDAPTETYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAHET 211
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 4.469e-31 Identity = 73/180 (40.56%), Postives = 106/180 (58.89%), Query Frame = 1 Query: 178 IHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 I EL+ ++ + LE + +L +L+ EL ++ P VG VV +G+ KV+VK ++V P RV L + + +LP D M+V++ P+ Y+ IGGL++Q++EI+EV+ELP+KHPELFE +GI PKG+LLYGPPGTGKTLLA+AVA T Sbjct: 49 IAELESRILKLELEKKELERENLQLMKENEILRRELDRMRVPPLIVGTVVDKVGERKVVVKSSTGPSFLVNVSHFVNPDDLAPGKRVCLNQQTLTVVDVLPENKDYRAKAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAVATET 228
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PRS10_SCHPO (Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe GN=rpt4 PE=2 SV=2) HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31 Identity = 76/187 (40.64%), Postives = 107/187 (57.22%), Query Frame = 1 Query: 148 EGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 708 E + Y LQH R+ L L +L + +++++ LQ G +GEV+K + + +VK +YVV RV+L + + ILP +VDPLV M +E D ++ +GGL++QI+E++EVIELP+K+PELF +GI PKGVLLYGPPGTGKTLLARAVA Sbjct: 9 EKYKSYLLQH--------REWDSKLKDLRFGNRDLVKKYDKTEDDIKSLQSVGQIIGEVLKQLDSERFIVKASSGPRYVVGCRNNVDQSHLVQGVRVSLDMTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAVA 187
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PSMR_UNCMA (Proteasome-activating nucleotidase OS=Uncultured methanogenic archaeon RC-I GN=pan PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.698e-30 Identity = 73/193 (37.82%), Postives = 108/193 (55.96%), Query Frame = 1 Query: 160 QYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSR-------VRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 +Y L + +L+ + + ++E ++ + ++ +R L EL L+ P VG ++ VM K+++K K+VV P +VAL S + +LP+ DP V M+V P+ Y IGGL+ QI E+KE +ELP+ PELF+ +GI PKGVLLYGPPGTGKTLLA+AVA+ T Sbjct: 25 KYLLDRVKQLEERNVRLKEEYRKIELEKKSVENKKVQYEREIRKLTSELDRLKTPPLIVGTILDVMANGKMIIKSSTGPKFVVNSSQFINSKEVYPGAKVALNQQSLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVGIEPPKGVLLYGPPGTGKTLLAKAVANRT 217
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PSMR_METMP (Proteasome-activating nucleotidase OS=Methanococcus maripaludis GN=pan PE=3 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 2.896e-30 Identity = 71/175 (40.57%), Postives = 105/175 (60.00%), Query Frame = 1 Query: 193 LQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 L++ K ++NR Q + N +LK EL L+ P +G ++ + + K +VK ++V P RV L + + +LP + D M++E+ PD +++ IGGL+ QI++IKEV+ELP+K+PELFE +GI PKGVLLYGPPGTGKTLLA+AVA+ T Sbjct: 35 LRLELKNKDINRENVQIKKENE---ILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYET 206
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PSMR_METM6 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.437e-29 Identity = 70/175 (40.00%), Postives = 105/175 (60.00%), Query Frame = 1 Query: 193 LQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 L++ K +++R Q + N +LK EL L+ P +G ++ + + K +VK ++V P RV L + + +LP + D M++E+ PD +++ IGGL+ QI++IKEV+ELP+K+PELFE +GI PKGVLLYGPPGTGKTLLA+AVA+ T Sbjct: 35 LRLELKNKDISRENVQIKKENE---ILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYET 206
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PSMR_METM5 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1) HSP 1 Score: 129.798 bits (325), Expect = 1.437e-29 Identity = 70/175 (40.00%), Postives = 105/175 (60.00%), Query Frame = 1 Query: 193 LQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 L++ K +++R Q + N +LK EL L+ P +G ++ + + K +VK ++V P RV L + + +LP + D M++E+ PD +++ IGGL+ QI++IKEV+ELP+K+PELFE +GI PKGVLLYGPPGTGKTLLA+AVA+ T Sbjct: 35 LRLELKNKDISRENVQIKKENE---ILKRELDKLRIPPLILGTILDRVNERKAVVKSSTGPNFLVNLSQFVDPDDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYET 206
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PSMR_METM7 (Proteasome-activating nucleotidase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.877e-29 Identity = 70/175 (40.00%), Postives = 104/175 (59.43%), Query Frame = 1 Query: 193 LQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 L++ K ++ R Q + N +LK EL L+ P +G ++ + + K +VK ++V P RV L + + +LP + D M++E+ PD +++ IGGL+ QI++IKEV+ELP+K+PELFE +GI PKGVLLYGPPGTGKTLLA+AVA+ T Sbjct: 35 LRLELKNKDVTRENVQIKKENE---ILKRELDKLRIPPLILGTILDKVNERKAVVKSSTGPNFLVNLSQFVDPEDIVPGARVCLNQQTLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVGIVPPKGVLLYGPPGTGKTLLAKAVAYET 206
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4) HSP 1 Score: 129.413 bits (324), Expect = 1.877e-29 Identity = 76/208 (36.54%), Postives = 117/208 (56.25%), Query Frame = 1 Query: 85 KQPESAAPEEVCAAKGASKQGEGLRQYYLQHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVA 708 ++P PE+ K ++ ++ L+H Q++Q+ N+ LE ++ + +++ LQ G +GEV+K + + K +VK +Y+V RV L + + ILP + DPLV M + + T+D IGGL +QI+E++EVIELP+K+PE+F+ +GI PKGVLLYGPPGTGKTLLA+AVA Sbjct: 41 EEPSRVDPEQEAHNKALNQ----FKRKLLEH-RRYDDQLKQRRQNIRDLEKLYDKTEN-------DIKALQSIGQLIGEVMKELSEEKYIVKASSGPRYIVGVRNSVDRSKLKKGVRVTLDITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQRVGIKPPKGVLLYGPPGTGKTLLAKAVA 236 The following BLAST results are available for this feature:
BLAST of CN186084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 183
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186084 ID=CN186084; Name=CN186084; organism=Citrus sinensis; type=EST; length=718bpback to top |