CN186084
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.066e-24 Identity = 62/189 (32.80%), Postives = 100/189 (52.91%), Query Frame = 1 Query: 172 QHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 + + +L + ++ L LE Q + + LK EE++ +Q +G+ ++ + +N +V Y V P+ VAL S L +LP D + ++ ++ PD Y IGG+D Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+LA+AVAHHT Sbjct: 35 EDLEDLYSRYKKLQQELEFLEVQEEYIKDEQKNLKKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVASTTGSNYYVRMVSTIDRELLKPNASVALHKHSNALVDVLPPAADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHT 223
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PRS4_YEAST (26S protease regulatory subunit 4 homolog OS=Saccharomyces cerevisiae GN=RPT2 PE=1 SV=3) HSP 1 Score: 113.235 bits (282), Expect = 1.392e-24 Identity = 58/148 (39.19%), Postives = 89/148 (60.14%), Query Frame = 1 Query: 274 KEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 K++L+ ++ +G + +++ + +V Y V P V L + + + +L DP+V++MK++K P +Y IGGL+ QI+EIKE +ELP+ HPEL+E +GI PKGV+LYG PGTGKTLLA+AVA+ T Sbjct: 93 KKQLEEIRGNPLSIGTLEEIIDDDHAIVTSPTMPDYYVSILSFVDKELLEPGCSVLLHHKTMSIVGVLQDDADPMVSVMKMDKSPTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAVANQT 240
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PRS7_YEAST (26S protease regulatory subunit 7 homolog OS=Saccharomyces cerevisiae GN=RPT1 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.375e-24 Identity = 56/124 (45.16%), Postives = 76/124 (61.29%), Query Frame = 1 Query: 346 KVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 K ++ + K+VV RV + Y + L LP ++DP V +M VE+ PD TY +GG QI++++EV+ELP+ PE F +LGI PKG+LLYGPPGTGKTL ARAVA+ T Sbjct: 144 KYVINLKQIAKFVVGLGERVSPTDIEEGMRVGVDRSKYNIELPLPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLCARAVANRT 267
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.375e-24 Identity = 62/182 (34.07%), Postives = 101/182 (55.49%), Query Frame = 1 Query: 172 QHIHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 +H+ +QLQ ++ ++ L + +EE++ +Q +G+ ++ + +N +V+ YVV PS+ VAL S L ILP + D + ++ + PD TY +GGLD Q +EI+E +ELP+ +L++ +GI P+GVLLYGPPGTGKT+L +AVA+ T Sbjct: 50 RHLEYIQLQEEY-------IKDEQRSLKRELVRAQEEIKRIQSVPLVIGQFMEAIDQNTGIVQSSTGSNYVVRILSTLDREKLKPSSSVALHRHSNALVDILPPEADSSIAMLGENEKPDVTYADVGGLDMQKQEIREAVELPLTQFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAVANST 224
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.102e-24 Identity = 62/180 (34.44%), Postives = 100/180 (55.56%), Query Frame = 1 Query: 178 IHELQLQVRQKTHNLNRLEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 + +L+ + T + ++ ++ L ++ +EE++ +Q +G+ ++ + +N +V YVV PS VAL S L ILP D +++M + PD TY +GGLD Q +EI+E +ELP+ +L+E +GI P+GVLLYGPPGTGKT+L +AVA+ T Sbjct: 51 LKKLEKEYELLTLQEDYIKDEQRHLKRELKRAQEEVKRIQSVPLVIGQFLEPIDQNTGIVSSTTGMSYVVRILSTLDRELLKPSMSVALHRHSNALVDILPPDSDSSISVMGENEKPDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAVANST 230
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 4.051e-24 Identity = 62/185 (33.51%), Postives = 101/185 (54.59%), Query Frame = 1 Query: 169 LQHIHELQLQVRQKTHNLNR--LEAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 L H+ ++ ++ +T NL + L AQ EE++ +Q +G+ ++ + +N +V Y V P VAL S L +LP + D + +++ ++ PD +Y IGGLD Q +E++E +ELP+ H EL++ +GI P+GVL+YGPPG GKT+LA+AVA +T Sbjct: 47 LAHLQVMEDYIKLETRNLEKELLHAQ------------EEVKRIQSVPLVIGQFLEAVDQNHAIVGSTTGSNYYVRVLSILDRELLKPGCSVALHKYSNALVDVLPPEADSSIQMLRPDEKPDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANT 219
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PRS4_ENCCU (26S protease regulatory subunit 4 homolog OS=Encephalitozoon cuniculi GN=RPT2 PE=1 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 6.910e-24 Identity = 50/82 (60.98%), Postives = 68/82 (82.93%), Query Frame = 1 Query: 472 ILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 +L ++DP+VN+MK+EK P TY IGGL++QI+EIKE +ELP+ +PEL++ +GI PKGV+LYG PGTGKTLLA+AVA+ T Sbjct: 146 VLEGEMDPMVNVMKLEKAPSETYADIGGLEEQIQEIKESVELPLTNPELYQEMGIKPPKGVILYGLPGTGKTLLAKAVANQT 227
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PRS6B_SCHPO (26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces pombe GN=rpt3 PE=2 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 9.025e-24 Identity = 64/187 (34.22%), Postives = 101/187 (54.01%), Query Frame = 1 Query: 184 ELQLQVRQKT--HNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 E+ L R K L L+ Q + + LK EE++ +Q +G+ ++ + +N +V YVV PS VAL+ S L ILP + D +++++ ++ PD +Y +GGLD Q +E++E +ELP+ +L+ +GI P+GVLLYGPPGTGKT+L +AVA+ T Sbjct: 6 EIDLYNRWKALERQLEMLDLQEGFIKEDCKSLKRELIRAQEEVKRIQSVPLVIGQFLEAIDQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDERPDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANST 192
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PSMR2_HALSA (Proteasome-activating nucleotidase 2 OS=Halobacterium salinarium GN=pan2 PE=3 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.179e-23 Identity = 64/190 (33.68%), Postives = 105/190 (55.26%), Query Frame = 1 Query: 157 RQYYLQHIHELQLQVRQKTHNLNRL---EAQRNELNSRVRMLKEELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 +Q L+ + E + ++ +RL A+ N+ ++ L E + L++ ++ V ++ + V +K H + + P +RVA+ N V+ L + D +M+V+ PD Y+ IGGLD Q++E++E +ELP+K P LFE++GI P GVLL+GPPGTGKTL+A+AVA T Sbjct: 20 QQDKLEALEEQLSTLEEENEERDRLLDANAENNKYQQKLERLSHENKKLKQSPLFIATVQELTDEGAV-IKQHGNNQEALTEVTDELRATLEPGSRVAVNNSLSVVRQ-LDDEADVRARVMEVDDSPDVGYEDIGGLDDQLREVRETVELPMKDPGLFETVGINPPSGVLLHGPPGTGKTLMAKAVASQT 207
BLAST of CN186084 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.539e-23 Identity = 63/184 (34.24%), Postives = 97/184 (52.72%), Query Frame = 1 Query: 187 LQLQVRQKTHNLNRLEAQRNELNSRVRMLK-------EELQLLQEPGSYVGEVVKVMGKNKVLVKVHPEGKYVVXXXXXXXXXXXXPSTRVALRNDSYVLHLILPSKVDPLVNLMKVEKVPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHT 717 L ++ +Q L LE + + + LK EEL ++ +G+ ++ + + +V +VV P+T VAL S + +LP +VD + +M + P TY +GGLD Q +EIKE +ELP+ +L+ +GI P+GVLLYGPPGTGKT+L +AVA+HT Sbjct: 9 LFVRYKQMERKLRLLEIREGYVRKEIETLKREERHSREELDRVKSVPLIMGQFLEPIDSSTAIVGSTAGSNFVVRILSTVDRELLKPNTTVALHRHSSAIVGVLPPEVDSTIPVMGESEKPSVTYGDVGGLDVQKQEIKETVELPLLQSDLYRQIGIDPPQGVLLYGPPGTGKTMLVKAVANHT 192 The following BLAST results are available for this feature:
BLAST of CN186084 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 183
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186084 ID=CN186084; Name=CN186084; organism=Citrus sinensis; type=EST; length=718bpback to top |