CN186083
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS6B_MOUSE (26S protease regulatory subunit 6B OS=Mus musculus GN=Psmc4 PE=1 SV=1) HSP 1 Score: 173.711 bits (439), Expect = 9.889e-43 Identity = 87/179 (48.60%), Postives = 126/179 (70.39%), Query Frame = -1 Query: 240 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKN 776 QKY+GEG RMVR++F +A+E+AP+IIF+DEID+I + R ++ +G D EVQR +LELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + I + +MNL +DL+ + + SGA++ ++C GM A+RE V +DFE A V+KK+ +++ Sbjct: 237 QKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQARGMLAVRETAYIVLAKDFEKAYKTVIKKDEQEH 414
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PSMR1_HALSA (Proteasome-activating nucleotidase 1 OS=Halobacterium salinarium GN=pan1 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.687e-42 Identity = 87/180 (48.33%), Postives = 131/180 (72.78%), Query Frame = -1 Query: 240 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAK-VMKKETEKN 776 +K+IGEGSR+VR+LF +A + P+IIF+DEID++ + R +S + +GD+EVQRTM++LL+++DGF+ I+++ ATNR D+LD A+LRPGR DR IE PNPN ++R IL+IH+ MN+ +D +A SGA+L ++ TEAGMFA+R+ R V ++DF+ A K V + +TE + Sbjct: 224 RKFIGEGSRLVRDLFELAEQKDPAIIFIDEIDAVAAKRTDSKT-SGDAEVQRTMMQLLSEMDGFDERGDIRIIAATNRFDMLDSAILRPGRFDRLIEVPNPNPDARERILEIHAGEMNVADSVDFSDLAADTAEFSGAQLASLATEAGMFAIRDDRDEVHRQDFDDAYEKLVAEGDTESS 402
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS6B_SOLTU (26S protease regulatory subunit 6B homolog OS=Solanum tuberosum PE=2 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 1.687e-42 Identity = 85/174 (48.85%), Postives = 125/174 (71.84%), Query Frame = -1 Query: 255 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKK 776 QKY+GEG RMVR++F +A+E+AP+IIF+DE+D+I +AR ++ +G D EVQR ++ELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + + ++ + +MNL +DL+ + + S AE+ A+C EAGM A+R+ R + +DFE +KK Sbjct: 232 QKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTG-ADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTAKMNLGDEVDLEDYVSRPDKISAAEITAICQEAGMHAVRKNRYVILPKDFEKGYRTNVKK 404
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PSMR_SULSO (Proteasome-activating nucleotidase OS=Sulfolobus solfataricus GN=pan PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.877e-42 Identity = 87/185 (47.03%), Postives = 133/185 (71.89%), Query Frame = -1 Query: 225 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNMSLRK 776 QK++GEG+R+VRELF MA+ APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF+ + +K++ ATNRIDILD ALLRPGR DR IE P P+ + R +I I+ ++M + I+L+ +++ G SGA++K VC EA A+R+ R VT D A+ K+ +K+ ++M R+ Sbjct: 206 QKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTEGFSGADIKNVCVEAAYMAIRDGRNKVTMNDLVEAINKINVKRNKMESMKERR 389
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PSMR_SULIN (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=pan PE=3 SV=1) HSP 1 Score: 172.17 bits (435), Expect = 2.877e-42 Identity = 87/185 (47.03%), Postives = 132/185 (71.35%), Query Frame = -1 Query: 225 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNMSLRK 776 QK++GEG+R+VRELF MA+ APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF + +K++ ATNRIDILD ALLRPGR DR IE P P+ R +I I+ ++M + I+L+ +++ G SGA++K VC EA A+R+ R VT +D A+ K+ +K+ ++M R+ Sbjct: 206 QKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVNAITKINVKRNNMESMKERR 389
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PSMR_SULTO (Proteasome-activating nucleotidase OS=Sulfolobus tokodaii GN=pan PE=3 SV=2) HSP 1 Score: 171.785 bits (434), Expect = 3.758e-42 Identity = 85/177 (48.02%), Postives = 124/177 (70.06%), Query Frame = -1 Query: 246 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETE 776 QK++GEG+R+VRE+F +AR APSI+F+DEID+IG+ R++ G+ +G+ E+QRT+++LL ++DGF+ + +K++ ATNR+DILD ALLRPGR DR IE P PN E R +I +I+ ++M I +A G SGAE+K VCTEAG A+R R +V D A+ K+ K + Sbjct: 206 QKFVGEGARIVREVFELARRKAPSIVFIDEIDAIGAKRVDMGT-SGEREIQRTLMQLLAEIDGFKPLDNVKIIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYLQKMKTDGNIRYDILASMTEGFSGAEIKNVCTEAGYIAIRNGRKYVNMTDLITAIEKIKAKNNK 381
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PSMR_SULIY (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.758e-42 Identity = 87/185 (47.03%), Postives = 132/185 (71.35%), Query Frame = -1 Query: 225 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNMSLRK 776 QK++GEG+R+VRELF MA+ APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF + +K++ ATNRIDILD ALLRPGR DR IE P P+ R +I I+ ++M + I+L+ +++ G SGA++K VC EA A+R+ R VT +D A+ K+ +K+ ++M R+ Sbjct: 206 QKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKRNNMESMKERR 389
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PSMR_SULIM (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.758e-42 Identity = 87/185 (47.03%), Postives = 132/185 (71.35%), Query Frame = -1 Query: 225 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNMSLRK 776 QK++GEG+R+VRELF MA+ APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF + +K++ ATNRIDILD ALLRPGR DR IE P P+ R +I I+ ++M + I+L+ +++ G SGA++K VC EA A+R+ R VT +D A+ K+ +K+ ++M R+ Sbjct: 206 QKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKRNNMESMKERR 389
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PSMR_SULIL (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain L.S.2.15 / Lassen #1) GN=pan PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.758e-42 Identity = 87/185 (47.03%), Postives = 132/185 (71.35%), Query Frame = -1 Query: 225 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNMSLRK 776 QK++GEG+R+VRELF MA+ APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF + +K++ ATNRIDILD ALLRPGR DR IE P P+ R +I I+ ++M + I+L+ +++ G SGA++K VC EA A+R+ R VT +D A+ K+ +K+ ++M R+ Sbjct: 206 QKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKRNNMESMKERR 389
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PSMR_SULIK (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=pan PE=3 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 3.758e-42 Identity = 87/185 (47.03%), Postives = 132/185 (71.35%), Query Frame = -1 Query: 225 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNMSLRK 776 QK++GEG+R+VRELF MA+ APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF + +K++ ATNRIDILD ALLRPGR DR IE P P+ R +I I+ ++M + I+L+ +++ G SGA++K VC EA A+R+ R VT +D A+ K+ +K+ ++M R+ Sbjct: 206 QKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKRNNMESMKERR 389 The following BLAST results are available for this feature:
BLAST of CN186083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186083 ID=CN186083; Name=CN186083; organism=Citrus sinensis; type=EST; length=776bpback to top |