CN186083

Overview
NameCN186083
Unique NameCN186083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PSMR_SULIA (Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain M.16.27) GN=pan PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 3.758e-42
Identity = 87/185 (47.03%), Postives = 132/185 (71.35%), Query Frame = -1
Query:  225 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV-MKKETEKNMSLRK 776
            QK++GEG+R+VRELF MA+  APSIIF+DEID+IG+ R++ G+ +G+ E+QRT+++LL +LDGF   + +K++ ATNRIDILD ALLRPGR DR IE P P+   R +I  I+ ++M +   I+L+ +++   G SGA++K VC EA   A+R+ R  VT +D   A+ K+ +K+   ++M  R+
Sbjct:  206 QKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAIGAKRIDIGT-SGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSEGFSGADIKNVCVEAAYMAIRDGRNKVTMKDLVDAITKINVKRNNMESMKERR 389          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PR6AA_XENLA (26S protease regulatory subunit 6A-A OS=Xenopus laevis GN=psmc3-A PE=2 SV=1)

HSP 1 Score: 167.548 bits (423), Expect = 7.087e-41
Identity = 84/153 (54.90%), Postives = 115/153 (75.16%), Query Frame = -1
Query:  318 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 776
            Q +IG+G+++VR+ F +A+E APSIIF+DE+D+IG+ R +S    GD EVQRTMLELLNQLDGF+ + ++KV+ ATNR+DILD ALLR GR+DRKIEFP PNEE+R  I++IHSR+MN+   ++ +++A     +     K    EAGM ALR
Sbjct:  242 QMFIGDGAKLVRDAFALAKEKAPSIIFIDELDAIGTKRFDSEKA-GDREVQRTMLELLNQLDGFQPNMQVKVIAATNRVDILDPALLRSGRLDRKIEFPMPNEEARARIMQIHSRKMNVSPDVNYEELARCPTISMALSAKQFGVEAGMIALR 393          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS6B_ASPNG (26S protease regulatory subunit 6B homolog OS=Aspergillus niger GN=tbpA PE=3 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 2.521e-38
Identity = 90/180 (50.00%), Postives = 124/180 (68.89%), Query Frame = -1
Query:  246 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN--PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIH-VTQEDFEMAVAKVMKKETE 776
            QKY+GEG RMVR++F MARE++P+IIF+DEID+I + R ++ +G  D EVQR +LELLNQ+DGFE S+ +KV+MATNR D LD ALLRPGR+DRKIEFP+     E RL I    + +M+L   +DL  +  +    SGA + A+  EAG+ A+R+ R + + + D E A A  +K   E
Sbjct:  238 QKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFEQSSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDRRERRL-IFSTIASKMSLSPEVDLDSLIVRNEPLSGAVIAAIMQEAGLRAVRKNRYNIIPRSDLEDAYAAQVKTGQE 415          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS6B_SCHPO (26S protease regulatory subunit 6B homolog OS=Schizosaccharomyces pombe GN=rpt3 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.292e-38
Identity = 83/174 (47.70%), Postives = 121/174 (69.54%), Query Frame = -1
Query:  258 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPN-PNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 776
            QKY+GEG RMVR++F MARE+AP+IIF+DEID+I + R ++ +G  D EVQR ++ELL Q+DGF+    +KV+MATNR D LD ALLRPGR+DRKIEFP+  +   R  + +  + +M L   +DL     + + +SGA++ A+  +AG+ A+R+ R  + Q D E A A+ +K
Sbjct:  206 QKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTG-ADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKMLLSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEAYARAVK 378          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS6B_YEAST (26S protease regulatory subunit 6B homolog OS=Saccharomyces cerevisiae GN=RPT3 PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 5.615e-38
Identity = 87/176 (49.43%), Postives = 120/176 (68.18%), Query Frame = -1
Query:  252 KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFP--NPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 773
            KY+GEG RMVR++F +ARE+APSIIF+DE+DSI + R ++ +G+ D EVQR ++ELL Q+DGF+ S  +KV+MATNR D LD ALLRPGR+DRKIEFP      E RL I    + +M+L    DL  +  + +  SGA + A+  EAG+ A+R+ R  + Q D E A A  +K +
Sbjct:  245 KYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQTGS-DREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPYLRDRRERRL-IFGTIASKMSLAPEADLDSLIIRNDSLSGAVIAAIMQEAGLRAVRKNRYVILQSDLEEAYATQVKTD 418          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: FTSH_AQUAE (Cell division protease ftsH homolog OS=Aquifex aeolicus GN=ftsH PE=1 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 5.256e-36
Identity = 76/182 (41.76%), Postives = 118/182 (64.84%), Query Frame = -1
Query:  231 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSL 776
            + ++G G+  VR+LF  A++HAP IIF+DEID++G AR     G G  E ++T+ +LL ++DGF+ S+ I V+ ATNR DILD ALLRPGR DR+I  P P+   R +ILK+H+R   L + +DL+ +A    G +GA+L+ +  EA + A R+ +  +T E+ E A+ ++      K M++
Sbjct:  226 EMFVGVGAARVRDLFETAKKHAPCIIFIDEIDAVGRARGAIPVGGGHDEREQTLNQLLVEMDGFDTSDGIIVIAATNRPDILDPALLRPGRFDRQIFIPKPDVRGRYEILKVHARNKKLAKDVDLEFVARATPGFTGADLENLLNEAALLAARKGKEEITMEEIEEALDRITMGLERKGMTI 407          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: Y1297_ARCFU (Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus fulgidus GN=AF_1297 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.691e-34
Identity = 80/195 (41.03%), Postives = 124/195 (63.59%), Query Frame = -1
Query:  237 KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEV-QRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE---------------RRIHVTQEDFEMAVAKVMKKETEKNM 773
            K++GE  + VRE+F  AR+ AP +IF DEIDS+   R     G GDS V +R + +LL +LDG E    + V+ ATNR D++D ALLRPGR++R I  P P++++R++I KIH R   L   ++++++AEK  G SGA+++AVC EAGM A+RE               +++ +T++ FE A+ KV    T++++
Sbjct:  528 KWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRR----GGIGDSHVTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPDKKARVEIFKIHLRGKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELIKPGMTREEAKEAAKKLKITKKHFEEALKKVRPSLTKEDV 718          

HSP 2 Score: 140.969 bits (354), Expect = 7.103e-33
Identity = 83/185 (44.86%), Postives = 115/185 (62.16%), Query Frame = -1
Query:  225 KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE--RRIHVTQEDFEMAVAKVMKKETEKNMSLRK 773
            KY GE  + +RE+F  A+E+APSIIF+DEIDSI   R E     G+ E +R + +LL  +DG EA   + V+ ATNR D +D AL RPGR DR+IE   P++E R +IL+IH+R+M L   +DL+++AE  NG  GA+L+A+C EA M ALR     I +  E+    V + +K   E  M   K
Sbjct:  255 KYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREEV---TGEVE-RRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKEGRKEILEIHTRKMPLAEDVDLEELAELTNGFVGADLEALCKEAAMHALRRVLPEIDIEAEEIPAEVIENLKVTREDFMEALK 435          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.431e-33
Identity = 72/153 (47.06%), Postives = 104/153 (67.97%), Query Frame = -1
Query:  315 KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 773
            K++GE  + +RE+F  AR+ AP IIF DEID+I   R   G     +   + + +LL +LDG E    + V+ ATNR DI+D ALLRPGR+DR I  P P+E++RLDI KIH+R MNL   ++L+++A+K  G +GA+++A+C EA M A+RE
Sbjct:  525 KWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKR---GRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELAKKTEGYTGADIEALCREAAMLAVRE 674          

HSP 2 Score: 122.479 bits (306), Expect = 2.614e-27
Identity = 69/152 (45.39%), Postives = 98/152 (64.47%), Query Frame = -1
Query:  318 KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALR 773
            KY+GE    +R++F  A E+APSIIF+DEID+I   R E+    G+ E +R + +LL  +DG +   ++ V+ ATNR + LD AL RPGR DR+I    P+ E R +IL+IH+R M L   +DL  +A+  +G  GA+L A+C EA M ALR
Sbjct:  252 KYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEA---TGEVE-RRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGFVGADLAALCKEAAMRALR 399          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: FTSH_CYACA (Cell division protease ftsH homolog OS=Cyanidium caldarium GN=ftsH PE=3 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.439e-33
Identity = 70/172 (40.70%), Postives = 112/172 (65.12%), Query Frame = -1
Query:  261 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 776
            + ++G G+  VR+LF  A+E AP I+F+DEID++G  R   G G G+ E ++T+ +LL ++DGF     + V+ ATNRID+LD ALLRPGR DR+I    PN   RL ILK+HS++  + + + L+ IA +  G SGA+L  +  EA +  +R  ++ +T ++ E ++ K++
Sbjct:  242 EMFVGVGASRVRDLFKKAKEKAPCIVFIDEIDAVGRQR-GVGIGGGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSALLRPGRFDRQIMVSLPNINGRLAILKVHSKKKKIHKDVLLEVIARRTPGFSGADLANLLNEAAILTVRRGKVEITMKEIEDSIDKII 412          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: FTSH_GUITH (Cell division protease ftsH homolog OS=Guillardia theta GN=ftsH PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.212e-32
Identity = 68/172 (39.53%), Postives = 114/172 (66.28%), Query Frame = -1
Query:  261 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 776
            + ++G G+  VR+LF  A+E++P I+F+DEID++G  R  +G G G+ E ++T+ +LL ++DGFE +  I ++ ATNR+D+LD ALLRPGR DR++    P+ + RL+IL +H+R   L   I L+ IA++  G SGA+L  +  EA +   R R+  +T  + + ++ +V+
Sbjct:  244 EMFVGVGASRVRDLFKKAKENSPCIVFIDEIDAVGRQR-GTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAALLRPGRFDRQVTVDVPDVKGRLEILNVHARNKKLDLSISLELIAKRTPGFSGADLANLLNEAAILTARRRKKQITISEIDASIDRVI 414          
The following BLAST results are available for this feature:
BLAST of CN186083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
PSMR_SULIA3.758e-4247.03Proteasome-activating nucleotidase OS=Sulfolobus i... [more]
PR6AA_XENLA7.087e-4154.9026S protease regulatory subunit 6A-A OS=Xenopus la... [more]
PRS6B_ASPNG2.521e-3850.0026S protease regulatory subunit 6B homolog OS=Aspe... [more]
PRS6B_SCHPO3.292e-3847.7026S protease regulatory subunit 6B homolog OS=Schi... [more]
PRS6B_YEAST5.615e-3849.4326S protease regulatory subunit 6B homolog OS=Sacc... [more]
FTSH_AQUAE5.256e-3641.76Cell division protease ftsH homolog OS=Aquifex aeo... [more]
Y1297_ARCFU1.691e-3441.03Cell division cycle protein 48 homolog AF_1297 OS=... [more]
Y1156_METJA1.431e-3347.06Cell division cycle protein 48 homolog MJ1156 OS=M... [more]
FTSH_CYACA5.439e-3340.70Cell division protease ftsH homolog OS=Cyanidium c... [more]
FTSH_GUITH1.212e-3239.53Cell division protease ftsH homolog OS=Guillardia ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F11_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186083 ID=CN186083; Name=CN186083; organism=Citrus sinensis; type=EST; length=776bp
TTTTTTTTTTTTTTTTTGCATGCGAATTTAAATTTAGATAAAACCGTTTG
CAAATTTGTTTATCATAAGAGGCTAGAGCGCAAGAAAAGACATACAGTCA
GGCTAAAAGGGCCTATCGTGCAAATGTCCCAGAACACGAGTGAGTGCCGT
TAAGGACTACTTGAATCTTGCTCAGAAAATAAGCAAATACACAGCACAGC
ACATGGAAATGATTACTTCCACAACTTCCGCAAGGACATGTTCTTCTCTG
TTTCTTTCTTCATGACCTTGGCCACTGCCATCTCAAAATCTTCCTGTGTT
ACATGGATCCTTCTCTCTCTTAGAGCAAACATACCGGCTTCTGTGCACAC
AGCCTTAAGCTCCGCACCAGATGCACCATTCATCTTCTCGGCAATCTTCT
TCAAATCAATGCCACGCATTAAATTCATTCTTCTTGAATGAATTTTTAGG
ATATCAAGACGAGACTCTTCATTAGGATTTGGAAATTCAATCTTTCTGTC
AATTCGTCCTGGCCTGAGAAGAGCTTGATCGAGAATATCAATTCGATTTG
TCGCCATGAGAACCTTAATTTTGTTTGATGCTTCAAATCCATCAAGCTGG
TTGAGCAGCTCCAGCATAGTCCTCTGCACCTCACTGTCACCATTTCCGCT
GCCAGATTCCATTCGGGCAGATCCGATACTGTCAATTTCATCCATAAAAA
TGATAGACGGAGCATGTTCCCTTGCCATAACAAAAAGTTCTCTAACCATT
CTGGAGCCTTCTCCAATGTATTTCTG
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