CN186083

Overview
NameCN186083
Unique NameCN186083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: FTSH_STRPN (Cell division protease ftsH homolog OS=Streptococcus pneumoniae GN=ftsH PE=3 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 3.898e-31
Identity = 72/182 (39.56%), Postives = 115/182 (63.19%), Query Frame = -1
Query:  231 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSL 776
            + ++G G+  VR LF  A++ AP+IIF+DEID++G  R   G G G+ E ++T+ +LL ++DGFE +  I V+ ATNR D+LD ALLRPGR DRK+    P+ + R  ILK+H++   L   +DLK +A++  G  GA+L+ V  EA + A R  +  +   D + A  +V+   ++K+ ++
Sbjct:  258 EMFVGVGASRVRSLFEDAKKAAPAIIFIDEIDAVGRQR-GVGLGGGNDEREQTLNQLLIEMDGFEGNEGIIVIAATNRSDVLDPALLRPGRFDRKVLVGRPDVKGREAILKVHAKNKPLAEDVDLKLVAQQTPGFVGADLENVLNEAALVAARRNKSIIDASDIDEAEDRVIAGPSKKDKTV 438          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPU (Cell division protease ftsH homolog OS=Mycoplasma pulmonis GN=ftsH PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.898e-31
Identity = 72/177 (40.68%), Postives = 115/177 (64.97%), Query Frame = -1
Query:  240 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKN 770
            Y+G G++ VRE+F  AR+ AP+IIF+DE+D++G +R  SG G G+ E ++T+ ++L ++DG   +  I ++ ATNR D+LD ALLRPGR DR I    P+ + R +ILK+HS+   L + I   KIA++  G SGA+L+ V  EA + ++RE+   +     + A+ +VM    +K+
Sbjct:  285 YVGLGAKRVREMFKEARKLAPAIIFIDELDAVGRSR-GSGIGGGNDEREQTLNQILVEMDGINENAGILIMGATNRTDVLDPALLRPGRFDRIITVGLPDIKEREEILKLHSKGKRLSKEIKFDKIAKRTPGYSGAQLENVINEASLLSVREKTDVIISTQIDEAIDRVMAGPAKKS 460          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: FTSH3_SYNY3 (Cell division protease ftsH homolog 3 OS=Synechocystis sp. (strain PCC 6803) GN=sll1463 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.898e-31
Identity = 70/181 (38.67%), Postives = 116/181 (64.09%), Query Frame = -1
Query:  231 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNK-IKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKNMSL 770
            ++G G+  VR+LF  A++ AP I+F+DE+D+IG +R       G+ E ++T+ +LL ++DGF A+   + VL ATNR + LD ALLRPGR DR++    P+   RL IL+I+++++ L + ++LK IA +  G +GA+L  +  EA + A R ++  VT+ DF  A+ +V+    +K+  L
Sbjct:  247 FVGAGAARVRDLFEQAKKQAPCIVFIDELDAIGKSRASGAFMGGNDEREQTLNQLLTEMDGFSAAGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRPDLAGRLKILEIYAKKIKLDKEVELKNIATRTPGFAGADLANLVNEAALLAARNKQDSVTEADFREAIERVVAGLEKKSRVL 427          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: FSTH_PORYE (Cell division protease ftsH homolog OS=Porphyra yezoensis GN=ftsH PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.898e-31
Identity = 66/172 (38.37%), Postives = 112/172 (65.12%), Query Frame = -1
Query:  261 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 776
            + ++G G+  VR+LF  A+++AP I+F+DEID++G  R  +G G G+ E ++T+ +LL ++DGFE +  + V+ ATNR DILD ALLRPGR DR++    P+ + RL IL++H++   +   + L+ IA +  G SGA+L  +  EA +   R R+  +T  + + ++ +V+
Sbjct:  244 EMFVGVGASRVRDLFKKAKDNAPCIVFIDEIDAVGRQR-GTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPGRFDRQVSVDVPDFKGRLAILEVHAKNKKMEPKVSLETIARRTPGFSGADLANLLNEAAILTARRRKNAMTMSEIDTSIDRVV 414          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: FTSH2_ARATH (Cell division protease ftsH homolog 2, chloroplastic OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 5.091e-31
Identity = 67/172 (38.95%), Postives = 111/172 (64.53%), Query Frame = -1
Query:  261 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 776
            + ++G G+  VR+LF  A+E+AP I+F+DEID++G  R  +G G G+ E ++T+ +LL ++DGFE +  + V+ ATNR DILD ALLRPGR DR++    P+ + R DILK+H+        + L+ IA +  G SGA+L  +  EA + A R  R  ++ ++ + ++ +++
Sbjct:  298 EMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQR-GTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQVSVDVPDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPGFSGADLANLLNEAAILAGRRARTSISSKEIDDSIDRIV 468          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: FTSH_MEDSA (Cell division protease ftsH homolog, chloroplastic OS=Medicago sativa GN=FTSH PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.648e-31
Identity = 67/177 (37.85%), Postives = 112/177 (63.28%), Query Frame = -1
Query:  240 YIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKN 770
            ++G G+  VR+LF  A+  AP I+F+DEID++G  R  +G G G+ E ++T+ +LL ++DGF  ++ + VL ATNR D+LD ALLRPGR DR++    P+   R+ IL++HSR   L + +D  KIA +  G +G +L+ +  EA + A R     +++++   A+ +++    +KN
Sbjct:  326 FVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQR-GAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRVKILQVHSRGKALAKDVDFDKIARRTPGFTGVDLQNLMNEAAILAARRDLKEISKDEIADALERIIAGPEKKN 501          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: FTSH_MYCPN (Cell division protease ftsH homolog OS=Mycoplasma pneumoniae GN=ftsH PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.683e-31
Identity = 73/178 (41.01%), Postives = 115/178 (64.61%), Query Frame = -1
Query:  240 IGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS--ARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKN 767
            +G G++ VR+LF  A++ AP IIF+DEIDS+GS   R+E  S    S V++T+ +LL ++DGF +   + V+ ATNR+D+LD ALLRPGR DR I+   P+ + R  IL++H++  NL   I L  +A++  G SGA+L+ V  EA + A+R+ R  +   D + A+ +V+    +K+
Sbjct:  302 VGVGAKRVRDLFNKAKKAAPCIIFIDEIDSVGSKRGRVELSSY---SVVEQTLNQLLAEMDGFTSRTGVVVMAATNRLDVLDDALLRPGRFDRHIQINLPDIKEREGILQVHAKNKNLSSKISLLDVAKRTPGFSGAQLENVINEATLLAVRDNRTTINMNDIDEAIDRVIAGPAKKS 476          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: FTSH1_SYNY3 (Cell division protease ftsH homolog 1 OS=Synechocystis sp. (strain PCC 6803) GN=slr0228 PE=3 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.683e-31
Identity = 67/172 (38.95%), Postives = 110/172 (63.95%), Query Frame = -1
Query:  261 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVM 776
            + ++G G+  VR+LF  A+E+AP +IF+DEID++G  R  +G G G+ E ++T+ +LL ++DGFE +  I ++ ATNR D+LD AL+RPGR DR++    P+   R +IL++H+R   L   + +  IA +  G SGA+L  +  EA +   R R+  +T  + + AV +V+
Sbjct:  243 EMFVGVGASRVRDLFKKAKENAPCLIFIDEIDAVGRQR-GAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRFDRQVMVDAPDYSGRKEILEVHARNKKLAPEVSIDSIARRTPGFSGADLANLLNEAAILTARRRKSAITLLEIDDAVDRVV 413          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: AFG32_HUMAN (AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1 SV=2)

HSP 1 Score: 134.035 bits (336), Expect = 8.683e-31
Identity = 75/186 (40.32%), Postives = 114/186 (61.29%), Query Frame = -1
Query:  246 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGN--GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKM----NGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV---MKKETE 776
            + ++G G   VR+LF +AR++AP I+F+DEID++G  R   G GN  G SE + T+ +LL ++DGF  +  + +L  TNR DILD ALLRPGR DR+I    P+ + R  I K+H R + L   ++  K+A K+     G SGA++  VC EA + A R     + Q+ FE A+ +V   ++K+T+
Sbjct:  379 EMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR---GRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQ 561          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: AFG32_BOVIN (AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 8.683e-31
Identity = 74/186 (39.78%), Postives = 115/186 (61.83%), Query Frame = -1
Query:  246 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGN--GDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKM----NGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV---MKKETE 776
            + ++G G   VR+LF +AR++AP I+F+DEID++G  R   G GN  G SE + T+ +LL ++DGF  +  + +L  TNR DILD AL+RPGR DR+I    P+ + R  I K+H R + L   ++ +K+A K+     G SGA++  VC EA + A R     + Q+ FE A+ +V   ++K+T+
Sbjct:  380 EMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKR---GRGNFGGQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGPPDIKGRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQKHFEQAIERVIGGLEKKTQ 562          
The following BLAST results are available for this feature:
BLAST of CN186083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
FTSH_STRPN3.898e-3139.56Cell division protease ftsH homolog OS=Streptococc... [more]
FTSH_MYCPU3.898e-3140.68Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH3_SYNY33.898e-3138.67Cell division protease ftsH homolog 3 OS=Synechocy... [more]
FSTH_PORYE3.898e-3138.37Cell division protease ftsH homolog OS=Porphyra ye... [more]
FTSH2_ARATH5.091e-3138.95Cell division protease ftsH homolog 2, chloroplast... [more]
FTSH_MEDSA6.648e-3137.85Cell division protease ftsH homolog, chloroplastic... [more]
FTSH_MYCPN8.683e-3141.01Cell division protease ftsH homolog OS=Mycoplasma ... [more]
FTSH1_SYNY38.683e-3138.95Cell division protease ftsH homolog 1 OS=Synechocy... [more]
AFG32_HUMAN8.683e-3140.32AFG3-like protein 2 OS=Homo sapiens GN=AFG3L2 PE=1... [more]
AFG32_BOVIN8.683e-3139.78AFG3-like protein 2 OS=Bos taurus GN=AFG3L2 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F11_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186083 ID=CN186083; Name=CN186083; organism=Citrus sinensis; type=EST; length=776bp
TTTTTTTTTTTTTTTTTGCATGCGAATTTAAATTTAGATAAAACCGTTTG
CAAATTTGTTTATCATAAGAGGCTAGAGCGCAAGAAAAGACATACAGTCA
GGCTAAAAGGGCCTATCGTGCAAATGTCCCAGAACACGAGTGAGTGCCGT
TAAGGACTACTTGAATCTTGCTCAGAAAATAAGCAAATACACAGCACAGC
ACATGGAAATGATTACTTCCACAACTTCCGCAAGGACATGTTCTTCTCTG
TTTCTTTCTTCATGACCTTGGCCACTGCCATCTCAAAATCTTCCTGTGTT
ACATGGATCCTTCTCTCTCTTAGAGCAAACATACCGGCTTCTGTGCACAC
AGCCTTAAGCTCCGCACCAGATGCACCATTCATCTTCTCGGCAATCTTCT
TCAAATCAATGCCACGCATTAAATTCATTCTTCTTGAATGAATTTTTAGG
ATATCAAGACGAGACTCTTCATTAGGATTTGGAAATTCAATCTTTCTGTC
AATTCGTCCTGGCCTGAGAAGAGCTTGATCGAGAATATCAATTCGATTTG
TCGCCATGAGAACCTTAATTTTGTTTGATGCTTCAAATCCATCAAGCTGG
TTGAGCAGCTCCAGCATAGTCCTCTGCACCTCACTGTCACCATTTCCGCT
GCCAGATTCCATTCGGGCAGATCCGATACTGTCAATTTCATCCATAAAAA
TGATAGACGGAGCATGTTCCCTTGCCATAACAAAAAGTTCTCTAACCATT
CTGGAGCCTTCTCCAATGTATTTCTG
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