CN186083

Overview
NameCN186083
Unique NameCN186083
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS7_PRUPE (26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.391e-51
Identity = 104/173 (60.12%), Postives = 131/173 (75.72%), Query Frame = -1
Query:  258 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 776
            QKY+GEG+RMVRELF MAR     I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A   IKVLMATNR D LD ALLRPGR+DRK+EF  P+ ESR  I KIH+R MN  R I  + +A     ++GA++++VCTEAGM+A+R RR  VT++DF  AV KV+K
Sbjct:  239 QKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 410          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS7A_ARATH (26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana GN=RPT1A PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.391e-51
Identity = 104/173 (60.12%), Postives = 131/173 (75.72%), Query Frame = -1
Query:  258 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 776
            QKY+GEG+RMVRELF MAR     I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A   IKVLMATNR D LD ALLRPGR+DRK+EF  P+ ESR  I KIH+R MN  R I  + +A     ++GA++++VCTEAGM+A+R RR  VT++DF  AV KV+K
Sbjct:  240 QKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 411          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS4_DICDI (26S protease regulatory subunit 4 homolog OS=Dictyostelium discoideum GN=psmC1 PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 4.429e-51
Identity = 98/176 (55.68%), Postives = 138/176 (78.41%), Query Frame = -1
Query:  249 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKET 776
            QKY+G+G ++VRELF +A E APSI+F+DEID++G+ R +S SG G+ E+QRTMLELLNQLDGF+A   +KV+MATNRI+ LD AL+RPGRIDRKIEFP P+ +++  I +IH+ +MNL   ++L++     +  SGA++KA+CTE+G+ ALRERR+ VT  DF+ A  KV+ ++T
Sbjct:  256 QKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKRYDSQSG-GEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDIKTKRKIFEIHTAKMNLSEDVNLEEFVMSKDDLSGADIKAICTESGLLALRERRMRVTHTDFKKAKEKVLYRKT 430          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS7_PONAB (26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2 SV=3)

HSP 1 Score: 201.06 bits (510), Expect = 5.784e-51
Identity = 105/173 (60.69%), Postives = 131/173 (75.72%), Query Frame = -1
Query:  258 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 776
            QKY+GEG+RMVRELF MAR     +IF DEID+IG AR + G+G GD+EVQRTMLEL+NQLDGF+    IKVLMATNR D LD AL+RPGR+DRKIEF  P+ E R  ILKIH+R M++ R I  + +A     ++GAE+++VCTEAGMFA+R RR   T++DF  AV KV+K
Sbjct:  247 QKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PSMR_METJA (Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii GN=pan PE=1 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.866e-51
Identity = 98/178 (55.06%), Postives = 140/178 (78.65%), Query Frame = -1
Query:  243 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEK 776
            +K+IGEG+ +V+++F +A+E APSIIF+DEID+I + R ++ +G GD EVQRT+++LL ++DGF+A   +K++ ATNR DILD A+LRPGR DR IE P P+E+ RL+ILKIH+R+MNL   ++L++IA+   G  GAELKA+CTEAGM A+RE R +VT +DF  AV K+M+K+  K
Sbjct:  242 KKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKRTDALTG-GDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLEEIAKMTEGCVGAELKAICTEAGMNAIRELRDYVTMDDFRKAVEKIMEKKKVK 418          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS7_SPIOL (26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.866e-51
Identity = 103/173 (59.54%), Postives = 130/173 (75.14%), Query Frame = -1
Query:  258 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 776
            QKY+GEG+RMVRELF MAR     I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A   IKVLMATNR D LD ALLRPGR+DRK+EF  P+ E R  I KIH+R MN  R I  + +A     ++GA++++VCTEAGM+A+R RR  VT++DF  AV KV+K
Sbjct:  240 QKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 411          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS7_ORYSJ (26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica GN=RPT1A PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 9.866e-51
Identity = 103/173 (59.54%), Postives = 130/173 (75.14%), Query Frame = -1
Query:  258 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 776
            QKY+GEG+RMVRELF MAR     I+F DE+D+IG AR + G G GD+EVQRTMLE++NQLDGF+A   IKVLMATNR D LD ALLRPGR+DRK+EF  P+ E R  I KIH+R MN  R I  + +A     ++GA++++VCTEAGM+A+R RR  VT++DF  AV KV+K
Sbjct:  240 QKYVGEGARMVRELFQMARSKKACIVFFDEVDAIGGARFDDGVG-GDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALLRPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLCPNSTGADIRSVCTEAGMYAIRARRKTVTEKDFLDAVNKVIK 411          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS7_XENLA (26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.683e-50
Identity = 104/173 (60.12%), Postives = 130/173 (75.14%), Query Frame = -1
Query:  258 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 776
            QKY+GEG+RMVRELF MAR     +IF DEID+IG AR + G+G GD+EVQRTMLEL+NQLDGF+    IKVLMATNR D LD AL+RPGR+DRKIEF  P+ E R  I KIH+R M++ R I  + +A     ++GAE+++VCTEAGMFA+R RR   T++DF  AV KV+K
Sbjct:  247 QKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKVATEKDFLEAVNKVIK 418          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS7_RAT (26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2 PE=1 SV=3)

HSP 1 Score: 199.519 bits (506), Expect = 1.683e-50
Identity = 104/173 (60.12%), Postives = 130/173 (75.14%), Query Frame = -1
Query:  258 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 776
            QKY+GEG+RMVRELF MAR     +IF DEID+IG AR + G+G GD+EVQRTMLEL+NQLDGF+    IKVLMATNR D LD AL+RPGR+DRKIEF  P+ E R  I KIH+R M++ R I  + +A     ++GAE+++VCTEAGMFA+R RR   T++DF  AV KV+K
Sbjct:  247 QKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418          
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS7_MOUSE (26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1 SV=5)

HSP 1 Score: 199.519 bits (506), Expect = 1.683e-50
Identity = 104/173 (60.12%), Postives = 130/173 (75.14%), Query Frame = -1
Query:  258 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK 776
            QKY+GEG+RMVRELF MAR     +IF DEID+IG AR + G+G GD+EVQRTMLEL+NQLDGF+    IKVLMATNR D LD AL+RPGR+DRKIEF  P+ E R  I KIH+R M++ R I  + +A     ++GAE+++VCTEAGMFA+R RR   T++DF  AV KV+K
Sbjct:  247 QKYVGEGARMVRELFEMARTKKACLIFFDEIDAIGGARFDDGAG-GDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALMRPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLCPNSTGAEIRSVCTEAGMFAIRARRKIATEKDFLEAVNKVIK 418          
The following BLAST results are available for this feature:
BLAST of CN186083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 377
Match NameE-valueIdentityDescription
PRS7_PRUPE3.391e-5160.1226S protease regulatory subunit 7 OS=Prunus persic... [more]
PRS7A_ARATH3.391e-5160.1226S protease regulatory subunit 7 homolog A OS=Ara... [more]
PRS4_DICDI4.429e-5155.6826S protease regulatory subunit 4 homolog OS=Dicty... [more]
PRS7_PONAB5.784e-5160.6926S protease regulatory subunit 7 OS=Pongo abelii ... [more]
PSMR_METJA9.866e-5155.06Proteasome-activating nucleotidase OS=Methanocaldo... [more]
PRS7_SPIOL9.866e-5159.5426S protease regulatory subunit 7 OS=Spinacia oler... [more]
PRS7_ORYSJ9.866e-5159.5426S protease regulatory subunit 7 OS=Oryza sativa ... [more]
PRS7_XENLA1.683e-5060.1226S protease regulatory subunit 7 OS=Xenopus laevi... [more]
PRS7_RAT1.683e-5060.1226S protease regulatory subunit 7 OS=Rattus norveg... [more]
PRS7_MOUSE1.683e-5060.1226S protease regulatory subunit 7 OS=Mus musculus ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F11_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186083 ID=CN186083; Name=CN186083; organism=Citrus sinensis; type=EST; length=776bp
TTTTTTTTTTTTTTTTTGCATGCGAATTTAAATTTAGATAAAACCGTTTG
CAAATTTGTTTATCATAAGAGGCTAGAGCGCAAGAAAAGACATACAGTCA
GGCTAAAAGGGCCTATCGTGCAAATGTCCCAGAACACGAGTGAGTGCCGT
TAAGGACTACTTGAATCTTGCTCAGAAAATAAGCAAATACACAGCACAGC
ACATGGAAATGATTACTTCCACAACTTCCGCAAGGACATGTTCTTCTCTG
TTTCTTTCTTCATGACCTTGGCCACTGCCATCTCAAAATCTTCCTGTGTT
ACATGGATCCTTCTCTCTCTTAGAGCAAACATACCGGCTTCTGTGCACAC
AGCCTTAAGCTCCGCACCAGATGCACCATTCATCTTCTCGGCAATCTTCT
TCAAATCAATGCCACGCATTAAATTCATTCTTCTTGAATGAATTTTTAGG
ATATCAAGACGAGACTCTTCATTAGGATTTGGAAATTCAATCTTTCTGTC
AATTCGTCCTGGCCTGAGAAGAGCTTGATCGAGAATATCAATTCGATTTG
TCGCCATGAGAACCTTAATTTTGTTTGATGCTTCAAATCCATCAAGCTGG
TTGAGCAGCTCCAGCATAGTCCTCTGCACCTCACTGTCACCATTTCCGCT
GCCAGATTCCATTCGGGCAGATCCGATACTGTCAATTTCATCCATAAAAA
TGATAGACGGAGCATGTTCCCTTGCCATAACAAAAAGTTCTCTAACCATT
CTGGAGCCTTCTCCAATGTATTTCTG
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