CN186083
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS6B_MACFA (26S protease regulatory subunit 6B OS=Macaca fascicularis GN=PSMC4 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.802e-44 Identity = 89/179 (49.72%), Postives = 129/179 (72.07%), Query Frame = -1 Query: 240 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKN 776 QKY+GEG RMVR++F +A+E+AP+IIF+DEID+I + R ++ +G D EVQR +LELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + I + +MNL +DL+ + + SGA++ ++C E+GM A+RE R V +DFE A V+KK+ +++ Sbjct: 237 QKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEH 414
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS6B_HUMAN (26S protease regulatory subunit 6B OS=Homo sapiens GN=PSMC4 PE=1 SV=2) HSP 1 Score: 179.489 bits (454), Expect = 1.802e-44 Identity = 89/179 (49.72%), Postives = 129/179 (72.07%), Query Frame = -1 Query: 240 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKN 776 QKY+GEG RMVR++F +A+E+AP+IIF+DEID+I + R ++ +G D EVQR +LELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + I + +MNL +DL+ + + SGA++ ++C E+GM A+RE R V +DFE A V+KK+ +++ Sbjct: 237 QKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEH 414
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS6B_BOVIN (26S protease regulatory subunit 6B OS=Bos taurus GN=PSMC4 PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.802e-44 Identity = 89/179 (49.72%), Postives = 129/179 (72.07%), Query Frame = -1 Query: 240 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEKN 776 QKY+GEG RMVR++F +A+E+AP+IIF+DEID+I + R ++ +G D EVQR +LELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + I + +MNL +DL+ + + SGA++ ++C E+GM A+RE R V +DFE A V+KK+ +++ Sbjct: 237 QKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQESGMLAVRENRYIVLAKDFEKAYKTVIKKDEQEH 414
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS6B_CAEEL (Probable 26S protease regulatory subunit 6B OS=Caenorhabditis elegans GN=rpt-3 PE=2 SV=1) HSP 1 Score: 178.718 bits (452), Expect = 3.074e-44 Identity = 91/176 (51.70%), Postives = 125/176 (71.02%), Query Frame = -1 Query: 249 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKET 776 QKY+GEG RMVR++F +A+E++PSIIF+DEID+I + R ++ +G D EVQR +LELLNQ+DGF+ S +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + + RMNL +DL+ + + SGA++ ++C EAGM A+RE R V +D E A V+KK+T Sbjct: 233 QKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTVCSRMNLSDDVDLEDWVARPDKISGADINSICQEAGMQAVRENRYVVLTKDLEKAYKNVVKKDT 407
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS10_YEAST (26S protease subunit RPT4 OS=Saccharomyces cerevisiae GN=RPT4 PE=1 SV=4) HSP 1 Score: 178.333 bits (451), Expect = 4.015e-44 Identity = 88/185 (47.57%), Postives = 126/185 (68.11%), Query Frame = -1 Query: 222 KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMK-KETEKNMSLRKL 773 KYIGE +R++RE+F A+EH P IIFMDE+D+IG R G+ + D E+QRT++ELL Q+DGF+ + K++MATNR D LD ALLRPGR+DRK+E P PNE RL+I KIH+ ++ D + + +G +GA+++ TEAG FA+R+ R H+ +D AV KV + K+ E + +KL Sbjct: 254 KYIGESARIIREMFAYAKEHEPCIIFMDEVDAIGGRRFSEGT-SADREIQRTLMELLTQMDGFDNLGQTKIIMATNRPDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSDGFNGADIRNCATEAGFFAIRDDRDHINPDDLMKAVRKVAEVKKLEGTIEYQKL 437
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS6B_MANSE (26S protease regulatory subunit 6B OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.944e-44 Identity = 88/175 (50.29%), Postives = 125/175 (71.43%), Query Frame = -1 Query: 252 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKE 776 QKY+GEG RMVR++F +A+E++P+IIF+DEID+I + R ++ +G D EVQR +LELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + I + +MNL +DL++ + + SGA++ A+C EAGM A+RE R V +DFE +KK+ Sbjct: 234 QKYLGEGPRMVRDVFRLAKENSPAIIFIDEIDAIATKRFDAQTG-ADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLIFSTITAKMNLSEEVDLEEFVARPDRVSGADINAICQEAGMNAVRENRYIVLPKDFEKGYKNNIKKD 407
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS6B_DICDI (26S protease regulatory subunit 6B homolog OS=Dictyostelium discoideum GN=psmC4 PE=1 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 8.944e-44 Identity = 87/178 (48.88%), Postives = 128/178 (71.91%), Query Frame = -1 Query: 243 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKKETEK 776 QKY+GEG R+VR++F +ARE++P+IIF+DEID+I + R ++ +G D EVQR ++ELLNQ+DGF+ S +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + I ++ + +MNL +DL+ + + SGAE++++C EAGM A+R+ R + +DFE +KK T + Sbjct: 222 QKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATKRFDAQTG-ADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPDRRQKRLIFQVITSKMNLSDEVDLEDYVSRPDKLSGAEIQSICQEAGMHAIRKNRYVILPKDFEKGYKASIKKNTHE 398
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PSMR_AERPE (Proteasome-activating nucleotidase OS=Aeropyrum pernix GN=pan PE=3 SV=1) HSP 1 Score: 175.252 bits (443), Expect = 3.399e-43 Identity = 91/170 (53.53%), Postives = 125/170 (73.53%), Query Frame = -1 Query: 264 KYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKV 773 K+IGEG+R+VRE+F +ARE APSI+F+DEID+I S R++ G+ +GD EVQRTML+LL +LDGF+ + +KV+ ATNR+D++D A+LRPGR DR IE P P+ RL+IL IH+R+ + +DL+ IA+ G SGA+LKAV EAG A+R +T +D AV KV Sbjct: 212 KFIGEGARLVREIFRLAREKAPSILFIDEIDAIASKRVDIGT-SGDREVQRTMLQLLAELDGFDPLDNVKVIAATNRLDLIDPAVLRPGRFDRIIEVPLPSLRGRLEILGIHTRKAKMAPDVDLEAIAKLTEGFSGADLKAVVVEAGYNAIRRGSRVITMDDMIKAVEKV 380
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS6B_ARATH (26S protease regulatory subunit 6B homolog OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.797e-43 Identity = 87/178 (48.88%), Postives = 128/178 (71.91%), Query Frame = -1 Query: 246 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAV-AKVMKKETE 776 QKY+GEG RMVR++F +A+E+AP+IIF+DE+D+I +AR ++ +G D EVQR ++ELLNQ+DGF+ + +KV+MATNR D LD ALLRPGR+DRKIEFP P+ + + ++ + +MNL +DL+ + + S AE+ A+C EAGM A+R+ R + +DFE A V K +T+ Sbjct: 227 QKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARFDAQTG-ADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFQVCTSKMNLSDEVDLEDYVSRPDKISAAEIAAICQEAGMHAVRKNRYVILPKDFEKGYRANVKKPDTD 403
BLAST of CN186083 vs. ExPASy Swiss-Prot
Match: PRS6B_ENCCU (26S protease regulatory subunit 6B homolog OS=Encephalitozoon cuniculi GN=ECU08_1970 PE=1 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 7.572e-43 Identity = 85/174 (48.85%), Postives = 125/174 (71.84%), Query Frame = -1 Query: 255 QKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPNEESRLDILKIHSRRMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRERRIHVTQEDFEMAVAKVMKK 776 QKY+GEG RMVR++F +ARE APSI+F+DE+DSI + R ++ S + D EVQR ++ELLNQ+DGF+ + +KV+MATNR D +D ALLRPGR+DRKIEFP P+ + + + +M+L +D++ + + S A++ ++C EAGM A+R R VTQ DFE A +KV+++ Sbjct: 206 QKYLGEGPRMVRDVFRLAREKAPSIVFIDEVDSIATKRFDA-STSADREVQRVLIELLNQMDGFDPAANVKVIMATNRADTIDPALLRPGRLDRKIEFPLPDRRQKRLVFNAITSKMSLNDSVDIESLVCRPEKISCADINSICQEAGMLAVRASRYMVTQRDFEEAYSKVVER 378 The following BLAST results are available for this feature:
BLAST of CN186083 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 377
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Sequences
The
following sequences are available for this feature:
EST sequence >CN186083 ID=CN186083; Name=CN186083; organism=Citrus sinensis; type=EST; length=776bpback to top |