DC900161

Overview
NameDC900161
Unique NameDC900161
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length610
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900161 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.306e-32
Identity = 64/119 (53.78%), Postives = 89/119 (74.79%), Query Frame = 1
Query:  217 GGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLXA 573
            GG  S +G+ S GY+S  G+R++MEDFY+ +   V+   + LFG+FDGHGG+ AAE++K +LF NL++HP FI+DTKSAI++ Y  TDS+FL +E N NR+ GSTASTAI VG+ +  A
Sbjct:  105 GGWTSDDGRMSCGYSSFRGRRANMEDFYDIKSSKVDDNQINLFGIFDGHGGSHAAEHLKKHLFENLLKHPSFITDTKSAISETYRKTDSDFLDAETNINREDGSTASTAIFVGNHIYVA 223          
BLAST of DC900161 vs. ExPASy Swiss-Prot
Match: P2C55_ORYSJ (Probable protein phosphatase 2C 55 OS=Oryza sativa subsp. japonica GN=Os06g0526700 PE=2 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 8.203e-30
Identity = 66/120 (55.00%), Postives = 86/120 (71.67%), Query Frame = 1
Query:  217 GGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKS-ENNQNRDAGSTASTAILVGDRLLXA 573
            G G S++GK S+GY+S  G+R SMED    +   V GE V LFGVFDGHGG RAAEY+K +LF NL++HPKF+ DTK AI   +  TD++FL+S  +++ RD GSTA  AIL+G+RL  A
Sbjct:  112 GVGCSKDGKLSWGYSSFQGRRPSMEDRLSIKSTTVNGETVSLFGVFDGHGGPRAAEYLKKHLFKNLVKHPKFLKDTKLAINQTFLKTDADFLQSISSDRYRDDGSTAVAAILIGNRLYVA 231          
BLAST of DC900161 vs. ExPASy Swiss-Prot
Match: P2C56_ORYSJ (Probable protein phosphatase 2C 56 OS=Oryza sativa subsp. japonica GN=Os06g0526800/Os06g0526950 PE=2 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 3.810e-27
Identity = 59/118 (50.00%), Postives = 84/118 (71.19%), Query Frame = 1
Query:  214 SGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKS-ENNQNRDAGSTASTAILVGDRL 564
            +GG  S++G+ S+ Y+S  G+R SMED +  ++  +  + V LFGVFDGHGG+ AAEY+K +LF NL+ HP+ + DTK AI+  +  TD++FL+S  +N  RD GSTA TAILVG+ L
Sbjct:   85 TGGSASEDGRLSWDYSSFKGRRPSMEDRFSIKMTTINEQTVSLFGVFDGHGGSLAAEYLKEHLFENLVNHPELLRDTKLAISQTFLKTDADFLESVSSNPFRDDGSTAVTAILVGNHL 202          
BLAST of DC900161 vs. ExPASy Swiss-Prot
Match: P2C17_ARATH (Probable protein phosphatase 2C 17 OS=Arabidopsis thaliana GN=At1g78200 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.515e-19
Identity = 50/139 (35.97%), Postives = 77/139 (55.40%), Query Frame = 1
Query:  178 SSSQVHADDSPASGGGLSQNGKFSYGYASSPGKRS-SMEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLXAMWCSEL 591
            S++QV       SG G +  G   YG++   GK + SMED++  +     G  +GLF +FDGH G   A Y++ +LFSN+++  +F+ D + AIA AY +TD + L          GSTA TAIL+  +   A+W + +
Sbjct:    9 SATQVVVAQKSNSGKGRNGEGGIKYGFSLIKGKSNHSMEDYHVAKFTNFNGNELGLFAIFDGHKGDHVAAYLQKHLFSNILKDGEFLVDPRRAIAKAYENTDQKILADNRTDLESGGSTAVTAILINGK---ALWIANV 144          
BLAST of DC900161 vs. ExPASy Swiss-Prot
Match: P2C09_ARATH (Probable protein phosphatase 2C 9 OS=Arabidopsis thaliana GN=At1g22280 PE=1 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.358e-16
Identity = 50/140 (35.71%), Postives = 73/140 (52.14%), Query Frame = 1
Query:  151 MGYLNSVLSSSSQVHADDSPASGGGLSQNGKFSYGYASSPGKRSS-MEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLL 567
            MG      S+S  V    S  SG G S  G   YG++   GK +  MED++      ++   +GLF ++DGH G     Y++  LFSN+++  +F  D + +IA AY  TD   L + ++  R  GSTA TAIL+  R L
Sbjct:    1 MGKFCCFTSASEVVGGQSSSRSGKGRSDEGMIKYGFSLVKGKANHPMEDYHVANFINIQDHELGLFAIYDGHMGDSVPAYLQKRLFSNILKEGEFWVDPRRSIAKAYEKTDQAILSNSSDLGR-GGSTAVTAILINGRKL 139          
BLAST of DC900161 vs. ExPASy Swiss-Prot
Match: P2C10_ARATH (Probable protein phosphatase 2C 10 OS=Arabidopsis thaliana GN=At1g34750 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 5.162e-16
Identity = 45/122 (36.89%), Postives = 73/122 (59.84%), Query Frame = 1
Query:  205 SPASGGGLSQNGKFSYGYASSPGKRSS-MEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLL 567
            S +SG G + +G+  +GY+   GK +  MED++ ++   ++G  +GLF ++DGH G R   Y++ +LFSN+++  +F  D + +I  AY  TD   L   ++  R  GSTA TAIL+  R L
Sbjct:   20 STSSGKGRNNDGEIKFGYSLVKGKANHPMEDYHVSKFVKIDGNELGLFAIYDGHLGERVPAYLQKHLFSNILKEEQFRYDPQRSIIAAYEKTDQAILSHSSDLGR-GGSTAVTAILMNGRRL 140          
BLAST of DC900161 vs. ExPASy Swiss-Prot
Match: P2C58_ARATH (Probable protein phosphatase 2C 58 OS=Arabidopsis thaliana GN=At4g28400 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 6.310e-14
Identity = 48/126 (38.10%), Postives = 74/126 (58.73%), Query Frame = 1
Query:  205 SPASGGGLSQNGK-FSYGYASSPGKRSS-MEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILV-GDRLLXA 573
            +P  G G S+  K  ++G+    GK S  MED+  +    +EG  +GLF +FDGH G   A+Y++ NLF N+++   F +DT++AI +AY  TD+  L+      +  GSTA T IL+ G +L+ A
Sbjct:   20 APDMGRGKSKMWKNITHGFHCVKGKSSHPMEDYVVSEFKKLEGHELGLFAIFDGHLGHDVAKYLQTNLFDNILKEKDFWTDTENAIRNAYRSTDAVILQQSLKLGK-GGSTAVTGILIDGKKLVVA 144          
BLAST of DC900161 vs. ExPASy Swiss-Prot
Match: P2C41_ORYSJ (Probable protein phosphatase 2C 41 OS=Oryza sativa subsp. japonica GN=Os04g0451900/Os04g0452000 PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 8.241e-14
Identity = 46/126 (36.51%), Postives = 64/126 (50.79%), Query Frame = 1
Query:  193 HADDSPASGGGLSQNGKFSYGYASSPGKRSS-MEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLL 567
            HA  S   G G+    K SYG+    G  +  MED++   +   +G  +GLF +FDGH G     Y++ NLF+N++   +F++    AI  AY  TD   L S        GSTA TAIL+  R L
Sbjct:   17 HASTSSGKGKGIQGQVKVSYGFYLVRGMTNHPMEDYHVAELAEEKGNELGLFAIFDGHLGDTVPAYLQKNLFANILNEEEFLTQPDRAIIKAYEKTDQAIL-SHTPDLGQGGSTAVTAILLNGRKL 141          
BLAST of DC900161 vs. ExPASy Swiss-Prot
Match: P2C20_ARATH (Probable protein phosphatase 2C 20 OS=Arabidopsis thaliana GN=PPC3-1.2 PE=1 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 2.398e-13
Identity = 42/108 (38.89%), Postives = 63/108 (58.33%), Query Frame = 1
Query:  247 SYGYASSPGKRSS-MEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLL 567
            ++GY    GK    MED+  +    V+G  +GLF +FDGH G   A+Y++ NLF N+++   F +DTK+AI +AY  TD+  L+      +  GSTA T IL+  + L
Sbjct:   31 AHGYDFVKGKAGHPMEDYVVSEFKKVDGHDLGLFAIFDGHLGHDVAKYLQTNLFDNILKEKDFWTDTKNAIRNAYISTDAVILEQSLKLGK-GGSTAVTGILIDGKTL 137          
BLAST of DC900161 vs. ExPASy Swiss-Prot
Match: P2C62_ORYSJ (Probable protein phosphatase 2C 62 OS=Oryza sativa subsp. japonica GN=Os07g0507000 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 5.906e-12
Identity = 43/122 (35.25%), Postives = 71/122 (58.20%), Query Frame = 1
Query:  196 ADDSPASGGGLSQ-NGK-FSYGYASSPGKRSS-MEDFYETRIDGVEGEIVGLFGVFDGHGGARAAEYVKHNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILV 552
            +   P +G G ++ +GK   +GY    GK +  MED+            +GLF +FDGH G    ++++ +LF N+++ P+F+S+ ++AI +AY  TD++ L+S     R  GSTA TAIL+
Sbjct:   19 SSSGPETGKGKTKLSGKRVKHGYHLVKGKSNHPMEDYLVAEYRQEGEHDLGLFAIFDGHLGHTVPDFLRSHLFDNILKQPEFLSNPQAAIRNAYQLTDAKILESAAELGR-GGSTAVTAILI 139          
The following BLAST results are available for this feature:
BLAST of DC900161 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
P2C07_ORYSJ2.306e-3253.78Probable protein phosphatase 2C 7 OS=Oryza sativa ... [more]
P2C55_ORYSJ8.203e-3055.00Probable protein phosphatase 2C 55 OS=Oryza sativa... [more]
P2C56_ORYSJ3.810e-2750.00Probable protein phosphatase 2C 56 OS=Oryza sativa... [more]
P2C17_ARATH6.515e-1935.97Probable protein phosphatase 2C 17 OS=Arabidopsis ... [more]
P2C09_ARATH1.358e-1635.71Probable protein phosphatase 2C 9 OS=Arabidopsis t... [more]
P2C10_ARATH5.162e-1636.89Probable protein phosphatase 2C 10 OS=Arabidopsis ... [more]
P2C58_ARATH6.310e-1438.10Probable protein phosphatase 2C 58 OS=Arabidopsis ... [more]
P2C41_ORYSJ8.241e-1436.51Probable protein phosphatase 2C 41 OS=Oryza sativa... [more]
P2C20_ARATH2.398e-1338.89Probable protein phosphatase 2C 20 OS=Arabidopsis ... [more]
P2C62_ORYSJ5.906e-1235.25Probable protein phosphatase 2C 62 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionDC900161 VSS Citrus sinensis cDNA clone VS27V81 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900161 ID=DC900161; Name=DC900161; organism=Citrus sinensis; type=EST; length=610bp
GATAATTCGTGACATTGAAATGATCTAACGAATGTGCAATCACCTATTGT
AACTAACCAAAACGCTGTCGCTGCTGTAGTTATTGCTTTCGTTGTTATTA
ATTTATTTTCTCTTCCGAGTGGTTAACGAATTGGAACTTGAAGCGAAACC
ATGGGGTATTTGAACTCGGTGTTGTCATCTTCAAGCCAGGTTCACGCCGA
TGATTCGCCGGCTAGCGGCGGGGGCCTTAGTCAGAACGGAAAGTTCAGCT
ACGGATATGCGAGTTCTCCTGGCAAGAGGTCTTCTATGGAAGATTTTTAT
GAGACCAGAATTGATGGCGTCGAAGGAGAGATAGTAGGCCTCTTTGGAGT
TTTTGATGGTCATGGGGGTGCACGAGCTGCTGAGTATGTGAAACACAACC
TCTTCAGCAATCTGATCAGGCATCCAAAGTTCATATCTGATACCAAATCG
GCAATAGCTGATGCATACAGCCACACAGACTCGGAATTTCTGAAGTCAGA
AAACAATCAAAACAGGGATGCTGGATCTACTGCTTCCACTGCCATCCTTG
TTGGTGATCGCTTACTTGNTGCAATGTGGTGCTCAGAGCTGTATATGCAG
GGCGGTATGC
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