CN186082

Overview
NameCN186082
Unique NameCN186082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CKB12_ARATH (Cyclin-dependent kinase B1-2 OS=Arabidopsis thaliana GN=CDKB1-2 PE=1 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 1.770e-22
Identity = 62/171 (36.26%), Postives = 97/171 (56.73%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQL-IAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKA-HPWHKVFHKRMP-----------PEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 480
            NLL+D     + I D G ++   +  +A    I + +YRAPE++ G+T Y+T++DIWS GC+ AE++  Q LFPG++   QL+ I ++LGTPT ++            +P + A   WH V+ K  P           PE IDL +++L+Y+P+ R +A  A  HP+FD L
Sbjct:  149 NLLLDKDKGILKIADLGLSRAFTVPLKAYTHEIVTLWYRAPEVLLGSTHYSTAVDIWSVGCIFAEMIRRQALFPGDSEFQQLLHIFRLLGTPTEQQ------------WPGVMALRDWH-VYPKWEPQDLSRAVPSLSPEGIDLLTQMLKYNPAERISAKAALDHPYFDSL 306          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: PMK1_CAEEL (Mitogen-activated protein kinase pmk-1 OS=Caenorhabditis elegans GN=pmk-1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.312e-22
Identity = 60/162 (37.04%), Postives = 91/162 (56.17%), Query Frame = 1
Query:   34 QVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP----NYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF----DELREPNA 495
            ++ I DFG A+Q         Y+ +R+YRAPE++     YT ++D+WS GC+LAEL+ G+ LFPG + +DQL  I+ V GTP  E ++ ++     NY     P++    + ++F  +  P+AIDL  ++L   P  R TA EA  H +     DE  EP A
Sbjct:  174 ELKILDFGLARQ--TDSEMTGYVATRWYRAPEIMLNWMHYTQTVDVWSVGCILAELITGKTLFPGSDHIDQLTRIMSVTGTPDEEFLKKISSEEARNYIR-NLPKMTRRDFKRLF-AQATPQAIDLLEKMLHLDPDRRPTAKEAMEHEYLAAYHDETDEPIA 331          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MPK12_ORYSJ (Mitogen-activated protein kinase 12 OS=Oryza sativa subsp. japonica GN=MPK12 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.312e-22
Identity = 78/221 (35.29%), Postives = 115/221 (52.04%), Query Frame = 1
Query:   34 QVNICDFGSAKQLIAGEANI----SYICSRFYRAPELIFGA-TEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI-RCMNPNYTDFRFPQIKAH--PWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLI------------PDHVKRQLGLNFLHPAG 636
            ++ ICDFG A+       +      Y+ +R+YRAPEL     ++YT +IDIWS GC+ AELL G+PLFPG+N V QL  I  +LGTP+ E + R  N     +     K H  P+ + F +   P A+ L  RLL + P  R +A EA A P+F  L     R P+  P+  L  F+ E    + + V +LI             +++K    ++FL+P+G
Sbjct:  226 KLKICDFGLARASFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGRPLFPGKNVVHQLDIITDLLGTPSSETLSRIRNEKARRYLSTMRKKHAVPFSQKF-RNTDPLALRLLERLLAFDPKDRSSAEEALADPYFASLANVE-REPSRHPISKL-EFEFERRKLTKDDVRELIYREILEYHPQMLQEYMKGGEQISFLYPSG 443          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MK13_MOUSE (Mitogen-activated protein kinase 13 OS=Mus musculus GN=Mapk13 PE=2 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.312e-22
Identity = 57/164 (34.76%), Postives = 89/164 (54.27%), Query Frame = 1
Query:   34 QVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 516
            ++ I DFG A+          Y+ +R+YRAPE+I     Y  ++DIWS GC++AE+L G+ LF G++ +DQL +I+KV G P  E ++ +            PQ     + ++F  R  P+A DL  ++L+     R TA +A AHPFF+  R+P       +P
Sbjct:  163 ELKILDFGLARH--TDTEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGAEFVQKLKDKAAKSYIQSLPQSPKKDFTQLF-PRASPQAADLLDKMLELDVDKRLTAAQALAHPFFEPFRDPEEETEAQQP 323          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: HOG1_ZYGRC (Mitogen-activated protein kinase HOG1 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / IFO 1130 / NBRC 1623 / NCYC 568) GN=HOG1 PE=3 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.312e-22
Identity = 57/154 (37.01%), Postives = 88/154 (57.14%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM-NPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 489
            + ICDFG A+  I       Y+ +R+YRAPE++    +Y   +DIWSAGC+ +E++ G+PLFPG++ V Q   I  +LG+P R+ I  + + N   F    P     P+ + F K + P+A+DL  R+L + P  R TA +A  HP+     +P
Sbjct:  158 LKICDFGLAR--IQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFSEMIEGKPLFPGKDHVHQFSIITDLLGSPPRDVINTICSENTLKFVTSLPHRDPVPFQERF-KTVEPDAVDLLERMLVFDPKKRITAADALVHPYLAPYHDP 308          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: HOG1_TRIHA (Mitogen-activated protein kinase hog1 OS=Trichoderma harzianum GN=hog1 PE=1 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.312e-22
Identity = 63/165 (38.18%), Postives = 91/165 (55.15%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF----PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 489
            N+LV+     + ICDFG A+  I       Y+ +R+YRAPE++    +Y   +DIWSAGC+ AE+L G+PLFPG++ V+Q   I ++LGTP  + I  +    T  RF    P+ +  P    F K     AIDL  R+L + P  R TA +A AH +     +P
Sbjct:  146 NILVNE-NCDLKICDFGLAR--IQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVINTIASENT-LRFVKSLPKRERQPLRNKF-KNADDSAIDLLERMLVFDPKKRVTATQALAHEYLQPYHDP 305          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MPK11_ARATH (Mitogen-activated protein kinase 11 OS=Arabidopsis thaliana GN=MPK11 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.019e-22
Identity = 63/186 (33.87%), Postives = 97/186 (52.15%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMP---PEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLI 585
            + I DFG A+     +    Y+ +R+YRAPEL+   +EYT +IDIWS GC+L E++  +PLFPG + V QL  I +++G+P    +  +  +       Q+  +P  + F  R P     A+DL  ++L + P+ R T  EA  HP+   L E N      RP    F+F  E    + E + +LI
Sbjct:  180 LKIGDFGLARTKSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTREPLFPGRDYVQQLRLITELIGSPDDSSLGFLRSDNARRYVRQLPQYP-RQNFAARFPNMSVNAVDLLQKMLVFDPNRRITVDEALCHPYLAPLHEYNEEPVCVRP----FHFDFEQPSLTEENIKELI 360          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: HOG1_KLULA (Mitogen-activated protein kinase HOG1 OS=Kluyveromyces lactis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.019e-22
Identity = 57/154 (37.01%), Postives = 88/154 (57.14%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM-NPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 489
            + ICDFG A+  I       Y+ +R+YRAPE++    +Y   +DIWSAGC+ AE++ G+PLFPG++ V Q   I  +LG+P ++ I  + + N   F    P     P+   F + + P+AIDL  ++L + P  R TA +A AHP+     +P
Sbjct:  157 LKICDFGLAR--IQDPQMTGYVSTRYYRAPEIMLTWQKYNVEVDIWSAGCIFAEMIEGKPLFPGKDHVHQFSIITDLLGSPPKDVIDTICSENTLKFVTSLPHRDPVPFSSRF-QNLEPDAIDLLEKMLVFDPKKRITAADALAHPYLSPYHDP 307          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: HOG1_COCHE (Mitogen-activated protein kinase HOG1 OS=Cochliobolus heterostrophus GN=HOG1 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.019e-22
Identity = 62/165 (37.58%), Postives = 93/165 (56.36%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF----PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 489
            N+LV+     + ICDFG A+  I       Y+ +R+YRAPE++    +Y   +DIWSAGC+ AE+L G+PLFPG++ V+Q   I ++LGTP  + I+ +    T  RF    P+ +  P    F K   P+A+DL   +L + P  R  A +A AHP+     +P
Sbjct:  146 NILVNE-NCDLKICDFGLAR--IQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITELLGTPPDDVIQTICSENT-LRFVQSLPKRERQPLANKF-KNAEPDAVDLLENMLVFDPRKRVRAEQALAHPYLAPYHDP 305          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAFK (Cell division control protein 2 homolog OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CRK2 PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.019e-22
Identity = 60/164 (36.59%), Postives = 95/164 (57.93%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQL-IAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE------EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 477
            NLL++    ++ I DFG A+   I        + + +YRAP+++ G+ +Y+T+IDIWS GC+ AE++ G PLFPG +  DQL+ I ++LGTP  +      E+   +PN+T +     +  PW   F K +    IDL S++L+  P+ R TA +A  H +F E
Sbjct:  130 NLLINR-EGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVY-----EPLPWES-FLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286          
The following BLAST results are available for this feature:
BLAST of CN186082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CKB12_ARATH1.770e-2236.26Cyclin-dependent kinase B1-2 OS=Arabidopsis thalia... [more]
PMK1_CAEEL2.312e-2237.04Mitogen-activated protein kinase pmk-1 OS=Caenorha... [more]
MPK12_ORYSJ2.312e-2235.29Mitogen-activated protein kinase 12 OS=Oryza sativ... [more]
MK13_MOUSE2.312e-2234.76Mitogen-activated protein kinase 13 OS=Mus musculu... [more]
HOG1_ZYGRC2.312e-2237.01Mitogen-activated protein kinase HOG1 OS=Zygosacch... [more]
HOG1_TRIHA2.312e-2238.18Mitogen-activated protein kinase hog1 OS=Trichoder... [more]
MPK11_ARATH3.019e-2233.87Mitogen-activated protein kinase 11 OS=Arabidopsis... [more]
HOG1_KLULA3.019e-2237.01Mitogen-activated protein kinase HOG1 OS=Kluyverom... [more]
HOG1_COCHE3.019e-2237.58Mitogen-activated protein kinase HOG1 OS=Cochliobo... [more]
CDC2H_PLAFK3.019e-2236.59Cell division control protein 2 homolog OS=Plasmod... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186082 ID=CN186082; Name=CN186082; organism=Citrus sinensis; type=EST; length=734bp
AGTGTAAACCTTTTGGTTGATCCTCTTACTCACCAGGTTAACATTTGTGA
TTTTGGAAGTGCAAAACAGCTGATTGCTGGAGAAGCAAACATATCATACA
TATGTTCACGTTTCTATCGGGCTCCAGAACTTATATTTGGAGCTACAGAA
TATACAACCTCAATTGATATATGGTCAGCTGGTTGTGTGCTTGCCGAGCT
TCTTTTGGGCCAGCCATTATTTCCTGGAGAAAATGCAGTGGACCAGCTTG
TAGAGATTATCAAGGTTCTCGGTACACCCACTCGTGAAGAAATTCGCTGT
ATGAATCCAAATTATACCGATTTTAGGTTTCCACAGATTAAAGCACATCC
TTGGCACAAGGTTTTCCACAAACGGATGCCTCCTGAGGCTATTGATCTTG
CTTCACGCCTGTTGCAGTATTCACCAAGTCTCCGATGTACAGCGCTAGAA
GCATGTGCACATCCTTTCTTTGATGAACTGCGTGAGCCAAATGCTCGCCT
ACCAAATGGCCGCCCACTGCCACCTCTCTTCAACTTTAAACAGGAATTAT
CGGGGGCTTCACCAGAGCTTGTTAATAAGTTGATACCAGACCATGTGAAA
CGGCAATTAGGTCTGAATTTCTTGCATCCAGCCGGGACATAGGTCTAGAC
AAGTAATATAGAAGTGAAATCTACTTGGTGATGTGTAGCACAAAGGGAAT
TATATCCTTGTTCGTAACTGCCATGCATTGAGGC
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