CN186082

Overview
NameCN186082
Unique NameCN186082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CKB22_ARATH (Cyclin-dependent kinase B2-2 OS=Arabidopsis thaliana GN=CDKB2-2 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 5.150e-22
Identity = 56/164 (34.15%), Postives = 93/164 (56.71%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISY-ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 495
            NLL+D  T  + I D G A+         ++ I + +YRAPE++ GAT Y+T +D+WS GC+ AEL+  Q +F G++ + QL+ I ++LGTP  E    ++       +PQ K           +    +DL S++L+Y P+ R +A +A  HP+FD+L + ++
Sbjct:  152 NLLMDRKTMTLKIADLGLARAFTLPMKKYTHEILTLWYRAPEVLLGATHYSTGVDMWSVGCIFAELVTKQAIFAGDSELQQLLRIFRLLGTPNEEVWPGVSKLKDWHEYPQWKPLSLSTAV-PNLDEAGLDLLSKMLEYEPAKRISAKKAMEHPYFDDLPDKSS 314          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDC2D_ANTMA (Cell division control protein 2 homolog D OS=Antirrhinum majus GN=CDC2D PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.150e-22
Identity = 57/159 (35.85%), Postives = 90/159 (56.60%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISY-ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDEL 480
            NLL+D  T  + I D G A+         ++ I + +YRAPE++ GAT Y+ ++D+WS  C+ AEL+  + LFPG++ + QL+ I ++LGTP  E    ++       +PQ  A P        +  + ++L S +L Y PS R +A +A  HP+FDEL
Sbjct:  150 NLLMDRKTMMLKIADLGLARAYTLPIKKYTHEILTLWYRAPEVLLGATHYSPAVDMWSVACIFAELVTQKALFPGDSELQQLLHIFRLLGTPNEEIWPGVSTLVDWHEYPQWTAQPISSAV-PGLDEKGLNLLSEMLHYEPSRRISAKKAMEHPYFDEL 307          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MPK4_ARATH (Mitogen-activated protein kinase 4 OS=Arabidopsis thaliana GN=MPK4 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.726e-22
Identity = 63/182 (34.62%), Postives = 95/182 (52.20%), Query Frame = 1
Query:   49 DFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMP---PEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLI 585
            DFG A+     +    Y+ +R+YRAPEL+   +EYT +IDIWS GC+L E +  +PLFPG++ V QL  I +++G+P    +  +  +       Q+  +P  + F  R P     A+DL  ++L + PS R T  EA  HP+   L + N      RP    FNF  E    + E + +LI
Sbjct:  187 DFGLARTKSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGETMTREPLFPGKDYVHQLRLITELIGSPDDSSLGFLRSDNARRYVRQLPQYP-RQNFAARFPNMSAGAVDLLEKMLVFDPSRRITVDEALCHPYLAPLHDINEEPVCVRP----FNFDFEQPTLTEENIKELI 363          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MK14A_CYPCA (Mitogen-activated protein kinase 14A OS=Cyprinus carpio GN=mapk14a PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.726e-22
Identity = 59/174 (33.91%), Postives = 96/174 (55.17%), Query Frame = 1
Query:   34 QVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF----PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQ 543
            ++ I DFG A+     +    Y+ +R+YRAPE++     Y  ++DIWS GC++AELL G+ LFPG + ++QL +I+++ GTP    I  M P++    +    PQ+    + +VF     P+A+DL  ++L      R TA EA AHP+F +  +P+   P   P    F  ++
Sbjct:  164 ELKILDFGLARH--TDDEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASLISRM-PSHEARTYINSLPQMPKRNFSEVF-IGANPQAVDLLEKMLVLDTDKRITAAEALAHPYFAQYHDPDDE-PEAEPFDQSFESRE 332          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MK07_RAT (Mitogen-activated protein kinase 7 OS=Rattus norvegicus GN=Mapk7 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.726e-22
Identity = 74/239 (30.96%), Postives = 112/239 (46.86%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEAN-----ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQLGLN-------FLHPAGT*V*TSNIEVKSTW 678
            NLLV+    ++ I DFG A+ L    A        Y+ +R+YRAPEL+    EYT +ID+WS GC+  E+L  + LFPG+N V QL  I+ VLGTP+   I+ +            P  +  PW  V+      +A+ L  R+L++ PS R +A  A  HPF  +  +P+       P    F+ +        E +   I D   R+ G+         L P  +     ++E+ S W
Sbjct:  187 NLLVNE-NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARREGIRQQIRFQPSLQPVASEPVCPDVEMPSPW 423          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MK07_MOUSE (Mitogen-activated protein kinase 7 OS=Mus musculus GN=Mapk7 PE=1 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.726e-22
Identity = 74/239 (30.96%), Postives = 112/239 (46.86%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEAN-----ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQLGLN-------FLHPAGT*V*TSNIEVKSTW 678
            NLLV+    ++ I DFG A+ L    A        Y+ +R+YRAPEL+    EYT +ID+WS GC+  E+L  + LFPG+N V QL  I+ VLGTP+   I+ +            P  +  PW  V+      +A+ L  R+L++ PS R +A  A  HPF  +  +P+       P    F+ +        E +   I D   R+ G+         L P  +     ++E+ S W
Sbjct:  187 NLLVNE-NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARREGIRQQIRFQPSLQPVASEPVCPDVEMPSPW 423          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MK07_HUMAN (Mitogen-activated protein kinase 7 OS=Homo sapiens GN=MAPK7 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 6.726e-22
Identity = 74/239 (30.96%), Postives = 112/239 (46.86%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEAN-----ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQLGLN-------FLHPAGT*V*TSNIEVKSTW 678
            NLLV+    ++ I DFG A+ L    A        Y+ +R+YRAPEL+    EYT +ID+WS GC+  E+L  + LFPG+N V QL  I+ VLGTP+   I+ +            P  +  PW  V+      +A+ L  R+L++ PS R +A  A  HPF  +  +P+       P    F+ +        E +   I D   R+ G+         L P  +     ++E+ S W
Sbjct:  187 NLLVNE-NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARISAAAALRHPFLAKYHDPDDEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARREGIRQQIRFQPSLQPVASEPGCPDVEMPSPW 423          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MK07_BOVIN (Mitogen-activated protein kinase 7 OS=Bos taurus GN=MAPK7 PE=2 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.726e-22
Identity = 74/239 (30.96%), Postives = 112/239 (46.86%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEAN-----ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF---RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQLGLN-------FLHPAGT*V*TSNIEVKSTW 678
            NLLV+    ++ I DFG A+ L    A        Y+ +R+YRAPEL+    EYT +ID+WS GC+  E+L  + LFPG+N V QL  I+ VLGTP+   I+ +            P  +  PW  V+      +A+ L  R+L++ PS R +A  A  HPF  +  +P+       P    F+ +        E +   I D   R+ G+         L P  +     ++E+ S W
Sbjct:  187 NLLVNE-NCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMTVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVY-PGADRQALSLLGRMLRFEPSARVSAAAALRHPFLAKYHDPDDEPDCAPPFDFAFDREALTRERIKEAIVAEIEDFHARREGIRQQIRFQPSLQPVASEPGCPDVEMPSPW 423          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: HOG1_EURHE (Mitogen-activated protein kinase hog1 OS=Eurotium herbariorum GN=hog1 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.726e-22
Identity = 63/162 (38.89%), Postives = 90/162 (55.56%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRF----PQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH----PFFDELREPNAR 498
            + IC FG A+  +       Y+ +R+YRAPE++    +Y   +DIWSAGC+ AE+L G+PLFPG++ V+Q   I ++LGTP  + I  +    T  RF    P+ +  P    F K   PEA+DL  R+L + P  R  A EA AH    P+ D   EP A+
Sbjct:  155 LKICGFGLAR--VQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLDGKPLFPGKDHVNQFSIITELLGTPPDDVIETICSENT-LRFVKSLPKRERQPLTSRF-KNADPEAVDLLERMLVFDPKKRIRAGEALAHEYLAPYHDPTDEPEAQ 312          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: HOG1_COCIM (Mitogen-activated protein kinase HOG1 OS=Coccidioides immitis GN=HOG1 PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 6.726e-22
Identity = 60/160 (37.50%), Postives = 91/160 (56.88%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCM-NPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAH----PFFDELREPNA 495
            + ICDFG A+  +       Y+ +R+YRAPE++    +Y   +D+WSAGC+ AE+L G+PLFPG++ V+Q   I ++LG+P  + I+ + + N   F    P+ +  P  + F K   P A+DL  R+L + P  R TA E  AH    P+ D   EP A
Sbjct:  155 LKICDFGLAR--VQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDVWSAGCIFAEMLSGRPLFPGKDHVNQFSIITELLGSPPDDVIKTICSANTLQFVQSLPKRERQPLSEKF-KGAEPLAVDLLERMLVFDPKKRITAAEGLAHEYLAPYHDPTDEPVA 311          
The following BLAST results are available for this feature:
BLAST of CN186082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CKB22_ARATH5.150e-2234.15Cyclin-dependent kinase B2-2 OS=Arabidopsis thalia... [more]
CDC2D_ANTMA5.150e-2235.85Cell division control protein 2 homolog D OS=Antir... [more]
MPK4_ARATH6.726e-2234.62Mitogen-activated protein kinase 4 OS=Arabidopsis ... [more]
MK14A_CYPCA6.726e-2233.91Mitogen-activated protein kinase 14A OS=Cyprinus c... [more]
MK07_RAT6.726e-2230.96Mitogen-activated protein kinase 7 OS=Rattus norve... [more]
MK07_MOUSE6.726e-2230.96Mitogen-activated protein kinase 7 OS=Mus musculus... [more]
MK07_HUMAN6.726e-2230.96Mitogen-activated protein kinase 7 OS=Homo sapiens... [more]
MK07_BOVIN6.726e-2230.96Mitogen-activated protein kinase 7 OS=Bos taurus G... [more]
HOG1_EURHE6.726e-2238.89Mitogen-activated protein kinase hog1 OS=Eurotium ... [more]
HOG1_COCIM6.726e-2237.50Mitogen-activated protein kinase HOG1 OS=Coccidioi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0002F10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186082 ID=CN186082; Name=CN186082; organism=Citrus sinensis; type=EST; length=734bp
AGTGTAAACCTTTTGGTTGATCCTCTTACTCACCAGGTTAACATTTGTGA
TTTTGGAAGTGCAAAACAGCTGATTGCTGGAGAAGCAAACATATCATACA
TATGTTCACGTTTCTATCGGGCTCCAGAACTTATATTTGGAGCTACAGAA
TATACAACCTCAATTGATATATGGTCAGCTGGTTGTGTGCTTGCCGAGCT
TCTTTTGGGCCAGCCATTATTTCCTGGAGAAAATGCAGTGGACCAGCTTG
TAGAGATTATCAAGGTTCTCGGTACACCCACTCGTGAAGAAATTCGCTGT
ATGAATCCAAATTATACCGATTTTAGGTTTCCACAGATTAAAGCACATCC
TTGGCACAAGGTTTTCCACAAACGGATGCCTCCTGAGGCTATTGATCTTG
CTTCACGCCTGTTGCAGTATTCACCAAGTCTCCGATGTACAGCGCTAGAA
GCATGTGCACATCCTTTCTTTGATGAACTGCGTGAGCCAAATGCTCGCCT
ACCAAATGGCCGCCCACTGCCACCTCTCTTCAACTTTAAACAGGAATTAT
CGGGGGCTTCACCAGAGCTTGTTAATAAGTTGATACCAGACCATGTGAAA
CGGCAATTAGGTCTGAATTTCTTGCATCCAGCCGGGACATAGGTCTAGAC
AAGTAATATAGAAGTGAAATCTACTTGGTGATGTGTAGCACAAAGGGAAT
TATATCCTTGTTCGTAACTGCCATGCATTGAGGC
back to top