CN186082

Overview
NameCN186082
Unique NameCN186082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10238 contig Csv1_Contig10238:699..1432. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: GSK3A_RAT (Glycogen synthase kinase-3 alpha OS=Rattus norvegicus GN=Gsk3a PE=1 SV=1)

HSP 1 Score: 295.434 bits (755), Expect = 2.057e-79
Identity = 142/202 (70.30%), Postives = 162/202 (80.20%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQLG 612
            NLLVDP T  + +CDFGSAKQL+ GE N+SYICSR+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR MNPNYT+F+FPQIKAHPW KVF  R PPEAI L S LL+Y+PS R + LEACAH FFDELR    +LPN RPLPPLFNF        P L   LIP H++   G
Sbjct:  249 NLLVDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFKSRTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELRSLGTQLPNNRPLPPLFNFSPGELSIQPSLNAILIPPHLRSPSG 450          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: SGG_DROME (Protein kinase shaggy OS=Drosophila melanogaster GN=sgg PE=1 SV=2)

HSP 1 Score: 292.352 bits (747), Expect = 1.742e-78
Identity = 139/203 (68.47%), Postives = 164/203 (80.79%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR-EPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQLG 612
            NLL+DP T  + +CDFGSAKQL+ GE N+SYICSR+YRAPELIFGA  YTT ID+WSAGCVLAELLLGQP+FPG++ VDQLVE+IKVLGTPTRE+IR MNPNYT+F+FPQIK+HPW KVF  R P EAI+L S LL+Y+PS R T L+ACAHPFFDELR E N  LPNGR +PPLFNF +      P LV +L+P H++   G
Sbjct:  737 NLLLDPETAVLKLCDFGSAKQLLHGEPNVSYICSRYYRAPELIFGAINYTTKIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEVIKVLGTPTREQIREMNPNYTEFKFPQIKSHPWQKVFRIRTPTEAINLVSLLLEYTPSARITPLKACAHPFFDELRMEGNHTLPNGRDMPPLFNFTEHELSIQPSLVPQLLPKHLQNASG 939          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: GSK3A_MOUSE (Glycogen synthase kinase-3 alpha OS=Mus musculus GN=Gsk3a PE=1 SV=2)

HSP 1 Score: 291.197 bits (744), Expect = 3.880e-78
Identity = 142/203 (69.95%), Postives = 163/203 (80.30%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVF-HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLIPDHVKRQLG 612
            NLLVDP T  + +CDFGSAKQL+ GE N+SYICSR+YRAPELIFGAT+YT+SID+WSAGCVLAELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+IR MNPNYT+F+FPQIKAHPW KVF   + PPEAI L S LL+Y+PS R + LEACAH FFDELR   A+LPN RPLPPLFNF        P L   LIP H++   G
Sbjct:  249 NLLVDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFKSSKTPPEAIALCSSLLEYTPSSRLSPLEACAHSFFDELRRLGAQLPNDRPLPPLFNFSPGELSIQPSLNAILIPPHLRSPAG 451          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: GSK3_DICDI (Glycogen synthase kinase-3 OS=Dictyostelium discoideum GN=gskA PE=1 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 1.292e-73
Identity = 133/205 (64.88%), Postives = 158/205 (77.07%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFH-KRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFK-QELSGASPELVNKLIPDHVKRQLGL 615
            NLL+D  T  + +CDFGSAK LI GE N+SYICSR YRAPELIFG+T YTT+ID+WS GCVLAELLLGQPLFPGEN +DQLVEIIKVLGTPT+E+I  MNP YT F+FP+IKA+PW +VF  K +P E+IDL S++L Y PS R   +E CAHPFFDELR+P   LP+G+PLPPLFNF   E +   P+L   LIP H   Q+ L
Sbjct:  184 NLLLDTSTSTLKLCDFGSAKILIKGETNVSYICSRHYRAPELIFGSTNYTTTIDVWSLGCVLAELLLGQPLFPGENGIDQLVEIIKVLGTPTKEQIHAMNPYYTSFKFPEIKANPWPRVFKAKDVPAESIDLISKILLYDPSSRLKPVEICAHPFFDELRDPKTCLPDGKPLPPLFNFTIAEQTSIGPKLAKTLIPSHAMNQIEL 388          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: GSK3_CAEEL (Glycogen synthase kinase-3 OS=Caenorhabditis elegans GN=gsk-3 PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.292e-69
Identity = 120/174 (68.97%), Postives = 145/174 (83.33%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPL 528
            NLL+DP +  + +CDFGSAK L+  E N+SYICSR+YRAPELIFGAT YT SID+WSAG V+AELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+I+ MNPNY +F+FPQIKAHPW+KVF    P EAIDL S++++Y+P+ R T   AC H FFDELR P+ARLP+GRPLP L
Sbjct:  166 NLLIDPESGVLKLCDFGSAKYLVRNEPNVSYICSRYYRAPELIFGATNYTNSIDVWSAGTVMAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIQSMNPNYKEFKFPQIKAHPWNKVFRVHTPAEAIDLISKIIEYTPTSRPTPQAACQHAFFDELRNPDARLPSGRPLPTL 339          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: GSK3_CAEBR (Glycogen synthase kinase-3 OS=Caenorhabditis briggsae GN=gsk-3 PE=3 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.251e-68
Identity = 120/174 (68.97%), Postives = 144/174 (82.76%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPL 528
            NLL+DP T  + +CDFGSAK L+  E N+SYICSR+YRAPELIFGAT YT SID+WSAG V+AELLLGQP+FPG++ VDQLVEIIKVLGTPTRE+I+ MNPNY +F+FPQIKAHPW+KVF    P EAIDL S++++Y+P+ R T   AC H FFDELR P+ARLP+GR LP L
Sbjct:  166 NLLIDPETGILKLCDFGSAKYLVRNEPNVSYICSRYYRAPELIFGATNYTNSIDVWSAGTVIAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIQSMNPNYKEFKFPQIKAHPWNKVFRVHTPAEAIDLISKIIEYTPTSRPTPQAACQHAFFDELRSPDARLPSGRALPQL 339          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: GSK3H_DROME (Putative glycogen synthase kinase-3 homolog OS=Drosophila melanogaster GN=gskt PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 2.787e-68
Identity = 119/195 (61.03%), Postives = 153/195 (78.46%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR-EPNARLPNGRPLPPLFNFKQELSGASPELVNKLIP 588
            N+L+D  T  + +CDFGSAKQLI+GE N+SYICSR+YRAPELIFG+T+YTT ID+WSAGCV++ELLLGQ +FPG++ VDQ+VEI+KV+GTPT E++  MNP+Y  F+ P++K HPW KVF  R P EAIDL S++L YSP+ R + L  CAHPFFDELR +P+ +LPNGR LPPLFNF        P+ +  L+P
Sbjct:  163 NMLLDSETGVLKLCDFGSAKQLISGEPNVSYICSRYYRAPELIFGSTDYTTKIDMWSAGCVMSELLLGQLIFPGDSGVDQIVEIVKVMGTPTSEQLHDMNPHYKQFKLPELKPHPWSKVFRIRTPAEAIDLVSKMLIYSPNARVSPLMGCAHPFFDELRQDPHQQLPNGRSLPPLFNFTDYEKTIEPDTMPLLLP 357          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: GSK3_SCHPO (Protein kinase gsk3 OS=Schizosaccharomyces pombe GN=gsk3 PE=1 SV=3)

HSP 1 Score: 256.914 bits (655), Expect = 8.109e-68
Identity = 124/208 (59.62%), Postives = 155/208 (74.52%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNG-------RPLPPLFNFKQELSGASPELVNKLIPDHVKRQL 609
            NLL+DP    + +CDFGSAK L+AGE N+SYICSR+YRAPELIFGAT+YT +IDIWS GCV+AEL+LG PLFPGE+ +DQLVEIIK+LGTP+RE+I+ MNPNY + RFPQI+  P  +VF + +P +A+DL S++LQY+P+ R TA EA  HPFFDELR+PN +L N        R LP LFNF        P+L  KLIP H +  L
Sbjct:  162 NLLLDPENGILKLCDFGSAKILVAGEPNVSYICSRYYRAPELIFGATDYTHAIDIWSTGCVMAELMLGHPLFPGESGIDQLVEIIKILGTPSREQIKTMNPNYMEHRFPQIRPQPLSRVFSRSVPLDALDLLSKMLQYTPTDRLTAAEAMCHPFFDELRDPNTKLHNSRNPDASPRHLPELFNFSPFELSIRPDLNQKLIPSHARDAL 369          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: GSK31_SCHPO (Protein kinase gsk31 OS=Schizosaccharomyces pombe GN=gsk31 PE=1 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.452e-56
Identity = 107/211 (50.71%), Postives = 136/211 (64.45%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP-------LPPLFNFKQELSGASPELVNKLIPDHVKRQLGLN 618
            NLLVD  T  + +CDFGSAK L+  E N+SYICSR+YRAPEL+FGAT YTT ID+WSA CV+AEL +G+PLFPG+++V+QLVEII+VLGTP+  EI  MNPNY +   P ++ H    V        A+DL  ++L Y PS R +A+E   HPFFDELR+PN      R        LPPLFNF        P L   ++P HV   L ++
Sbjct:  155 NLLVDYKTGILKLCDFGSAKVLVPSEPNVSYICSRYYRAPELVFGATHYTTKIDVWSAACVIAELFIGRPLFPGDSSVEQLVEIIRVLGTPSYHEISVMNPNYVNHSLPNVRPHTLESVMPHNCTKNAMDLLHKMLTYVPSKRISAIEVLTHPFFDELRDPNCMYHCSRDEGTIERHLPPLFNFNLAELSIRPNLNKAILPPHVYESLDVD 365          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MDS1_YEAST (Serine/threonine-protein kinase MDS1/RIM11 OS=Saccharomyces cerevisiae GN=MDS1 PE=1 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.064e-51
Identity = 102/189 (53.97%), Postives = 133/189 (70.37%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQ--ELSGASPE 567
            NLLVDP T  + +CDFGSAKQL   E N+SYICSR+YRAPELIFGAT YT  IDIWS+GCV+AELLLGQP+FPGE+ +DQLVEIIK+LGTP+++EI  MNPNY + +FPQIK  P  +VF K+   + ++  + +L+Y P  R  AL+    P+FDEL+  + ++        L  F +  EL   SP+
Sbjct:  169 NLLVDPETWSLKLCDFGSAKQLKPTEPNVSYICSRYYRAPELIFGATNYTNQIDIWSSGCVMAELLLGQPMFPGESGIDQLVEIIKILGTPSKQEICSMNPNYMEHKFPQIKPIPLSRVF-KKEDDQTVEFLADVLKYDPLERFNALQCLCSPYFDELKLDDGKINQITTDLKLLEFDENVELGHLSPD 356          
The following BLAST results are available for this feature:
BLAST of CN186082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GSK3A_RAT2.057e-7970.30Glycogen synthase kinase-3 alpha OS=Rattus norvegi... [more]
SGG_DROME1.742e-7868.47Protein kinase shaggy OS=Drosophila melanogaster G... [more]
GSK3A_MOUSE3.880e-7869.95Glycogen synthase kinase-3 alpha OS=Mus musculus G... [more]
GSK3_DICDI1.292e-7364.88Glycogen synthase kinase-3 OS=Dictyostelium discoi... [more]
GSK3_CAEEL3.292e-6968.97Glycogen synthase kinase-3 OS=Caenorhabditis elega... [more]
GSK3_CAEBR1.251e-6868.97Glycogen synthase kinase-3 OS=Caenorhabditis brigg... [more]
GSK3H_DROME2.787e-6861.03Putative glycogen synthase kinase-3 homolog OS=Dro... [more]
GSK3_SCHPO8.109e-6859.62Protein kinase gsk3 OS=Schizosaccharomyces pombe G... [more]
GSK31_SCHPO5.452e-5650.71Protein kinase gsk31 OS=Schizosaccharomyces pombe ... [more]
MDS1_YEAST1.064e-5153.97Serine/threonine-protein kinase MDS1/RIM11 OS=Sacc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186082 ID=CN186082; Name=CN186082; organism=Citrus sinensis; type=EST; length=734bp
AGTGTAAACCTTTTGGTTGATCCTCTTACTCACCAGGTTAACATTTGTGA
TTTTGGAAGTGCAAAACAGCTGATTGCTGGAGAAGCAAACATATCATACA
TATGTTCACGTTTCTATCGGGCTCCAGAACTTATATTTGGAGCTACAGAA
TATACAACCTCAATTGATATATGGTCAGCTGGTTGTGTGCTTGCCGAGCT
TCTTTTGGGCCAGCCATTATTTCCTGGAGAAAATGCAGTGGACCAGCTTG
TAGAGATTATCAAGGTTCTCGGTACACCCACTCGTGAAGAAATTCGCTGT
ATGAATCCAAATTATACCGATTTTAGGTTTCCACAGATTAAAGCACATCC
TTGGCACAAGGTTTTCCACAAACGGATGCCTCCTGAGGCTATTGATCTTG
CTTCACGCCTGTTGCAGTATTCACCAAGTCTCCGATGTACAGCGCTAGAA
GCATGTGCACATCCTTTCTTTGATGAACTGCGTGAGCCAAATGCTCGCCT
ACCAAATGGCCGCCCACTGCCACCTCTCTTCAACTTTAAACAGGAATTAT
CGGGGGCTTCACCAGAGCTTGTTAATAAGTTGATACCAGACCATGTGAAA
CGGCAATTAGGTCTGAATTTCTTGCATCCAGCCGGGACATAGGTCTAGAC
AAGTAATATAGAAGTGAAATCTACTTGGTGATGTGTAGCACAAAGGGAAT
TATATCCTTGTTCGTAACTGCCATGCATTGAGGC
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