CN186082

Overview
NameCN186082
Unique NameCN186082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10238 contig Csv1_Contig10238:699..1432. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MDE3_SCHPO (Sporulation protein kinase mde3 OS=Schizosaccharomyces pombe GN=mde3 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 6.515e-17
Identity = 50/170 (29.41%), Postives = 86/170 (50.59%), Query Frame = 1
Query:   31 HQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN--------PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 516
            + + + DFG A+  ++ +    Y+ +R+YRAPEL+  +  Y  S+D+++ GC++ E+   +PLFPG N  DQL  + ++LG P  +E+  ++             F  P  K +P  K+  +  P     +   LL ++P +R TA + C   FF     P+A   N  P
Sbjct:  170 YSIKLGDFGLARPSVSSDPLTEYVSTRWYRAPELLLRSGSYNHSVDLYAFGCIVFEIYSLKPLFPGRNETDQLNRVCEILGNPGIDELDTLHYWSQAKELAKRLGFMLPPTKPYPIQKLLPQNCPEGHAKMIPCLLAWNPDVRPTA-KYCKEVFFP--LPPSASKSNSVP 336          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: JNK1_ANCCA (Stress-activated protein kinase JNK-1 OS=Ancylostoma caninum GN=JNK-1 PE=2 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 6.515e-17
Identity = 53/158 (33.54%), Postives = 83/158 (52.53%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE---EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPP-----------EAIDLASRLLQYSPSLRCTALEACAHPF 468
            + I DFG A+  +       Y+ +R+YRAPE+I G   Y  ++D+WS GC+  EL+ G+ LFPG + +DQ   II++LGTP  +    ++    NY + R  + +  P+  +F   M P           +A DL SR+L   P  R +  +A AH +
Sbjct:  165 LKILDFGLARTAVEAFMMTPYVVTRYYRAPEVILGMG-YGENVDVWSVGCIFGELIRGRVLFPGADHIDQWTRIIELLGTPEPQFLARLQTTVRNYVENR-QKYQPVPFETLFADNMFPPGADNARLTAAKARDLLSRMLVIDPEKRISVDDALAHEY 320          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MK10_MOUSE (Mitogen-activated protein kinase 10 OS=Mus musculus GN=Mapk10 PE=1 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.509e-17
Identity = 53/164 (32.32%), Postives = 86/164 (52.44%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDFR-------FPQI---KAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREP 489
            + I DFG A+          Y+ +R+YRAPE+I G   Y  ++DIWS GC++ E++  + LFPG + +DQ  ++I+ LGTP  E ++ + P   NY + R       FP++      P     +K    +A DL S++L   P  R +  +A  HP+ +   +P
Sbjct:  203 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRSYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPVKRISVDDALQHPYINVWYDP 365          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CSK2A_CAEEL (Casein kinase II subunit alpha OS=Caenorhabditis elegans GN=kin-3 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.509e-17
Identity = 56/173 (32.37%), Postives = 86/173 (49.71%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQI----KAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNAR 498
            N+++D    ++ + D+G A+     +     + SR+++ PEL+     Y  S+D+WS GC+LA ++   +P F G +  DQLV I KVLGT    E         D RF  I        W +  H      + PEA+D   +LL+Y  + R TA EA  H +F  + E +AR
Sbjct:  160 NVMIDAEKRELRLIDWGLAEFYHPRQDYNVRVASRYFKGPELLVDYQCYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTDELYEYIARYHIDLDPRFNDILGRHSRKRWERFIHAENQHLVTPEALDFLDKLLRYDHAERLTAQEAMGHEYFRPVVEAHAR 332          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CSK22_CHICK (Casein kinase II subunit alpha' OS=Gallus gallus PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.509e-17
Identity = 52/165 (31.52%), Postives = 85/165 (51.52%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLL-GQPLFPGENAVDQLVEIIKVLGTP-----TREEIRCMNPNYTDFRFPQIKAHPWHKVFHKR----MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 471
            N+++D    ++ + D+G A+     +     + SR+++ PEL+     Y  S+D+WS GC+LA ++   +P F G++  DQLV I KVLGT       ++    ++P++ D    Q     W    H      + PE +DL  +LL+Y    R TA EA  HP+F
Sbjct:  162 NVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGQDNYDQLVRIAKVLGTDELYGYLKKYHIELDPHFNDI-LGQHSRKRWENFIHSENRHLVSPEVLDLLDKLLRYDHQQRLTAKEAMEHPYF 325          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDKC1_ORYSJ (Cyclin-dependent kinase C-1 OS=Oryza sativa subsp. japonica GN=CDKC-1 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 8.509e-17
Identity = 55/161 (34.16%), Postives = 89/161 (55.28%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEAN---ISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN--PNYTDFRFP-QIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 471
            NLL+D     + + DFG A+   + + N    + + + +YR PEL+ G+T+Y  ++D+WS GC+ AELL G+P+ PG+N  +QL +I  V GTP       +   P Y +F+ P Q+K     K + K     A+DL  ++L   P+ R +A +A    +F
Sbjct:  169 NLLIDN-EGNLKLADFGLARSF-SNDHNGNLTNRVITLWYRPPELLLGSTKYGPAVDMWSVGCIFAELLNGKPILPGKNEPEQLSKIFDVCGTPDESNWPGVTKMPWYNNFKPPRQLKRRV--KEYFKHFDRLALDLLEKMLTLDPAQRISAQDALDAEYF 325          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: BUR1_CANAL (Serine/threonine-protein kinase BUR1 OS=Candida albicans GN=CRK1 PE=3 SV=2)

HSP 1 Score: 87.4261 bits (215), Expect = 8.509e-17
Identity = 49/145 (33.79%), Postives = 72/145 (49.66%), Query Frame = 1
Query:   82 EANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRP 516
            +A    + +R+YR PE++ G  +YTT++D+W  GCV AEL  G+P+  G++   Q   + +++G+P         PN  ++             F   MP EAIDL S LL   P  R  AL+A  H FF    +P   LP   P
Sbjct:  220 KAYTGLVVTRWYRPPEILLGERKYTTAVDLWGIGCVFAELFTGKPILVGKSDSHQAQIVFELVGSPLTWTDAAKLPNKNEYSCGLACKRSLEAKFASIMPTEAIDLLSGLLTLDPFKRLNALDALNHKFFS--TDPLPLLPTQMP 362          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MK08_MOUSE (Mitogen-activated protein kinase 8 OS=Mus musculus GN=Mapk8 PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.111e-16
Identity = 52/166 (31.33%), Postives = 88/166 (53.01%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 492
            + I DFG A+          Y+ +R+YRAPE+I G   Y  ++D+WS GC++ E++  + LFPG + +DQ  ++I+ LGTP  E ++ + P    Y + R P+   + + K+F           +K    +A DL S++L    S R +  EA  HP+ +   +P+
Sbjct:  165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPS 328          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MK08_HUMAN (Mitogen-activated protein kinase 8 OS=Homo sapiens GN=MAPK8 PE=1 SV=2)

HSP 1 Score: 87.0409 bits (214), Expect = 1.111e-16
Identity = 52/166 (31.33%), Postives = 88/166 (53.01%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNP---NYTDFRFPQIKAHPWHKVF-----------HKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 492
            + I DFG A+          Y+ +R+YRAPE+I G   Y  ++D+WS GC++ E++  + LFPG + +DQ  ++I+ LGTP  E ++ + P    Y + R P+   + + K+F           +K    +A DL S++L    S R +  EA  HP+ +   +P+
Sbjct:  165 LKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENR-PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVWYDPS 328          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDK4_XENLA (Cell division protein kinase 4 OS=Xenopus laevis GN=cdk4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.111e-16
Identity = 52/150 (34.67%), Postives = 77/150 (51.33%), Query Frame = 1
Query:   34 QVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPE----AIDLASRLLQYSPSLRCTALEACAHPFF 471
            QV + DFG A+      A    + + +YRAPE++  +T Y T +D+WSAGC+ AE+   +PLF G +  DQL +I  ++G P+ EE         D   P+    P  +    +  PE      DL   +L +SP  R +A +A  HPFF
Sbjct:  153 QVKLADFGLARIYSCQMALTPVVVTLWYRAPEVLLQST-YATPVDVWSAGCIFAEMFKRKPLFCGNSEADQLCKIFDIIGLPSEEEWP------VDVTLPRSAFSPRTQQPVDKFVPEIDAMGADLLLAMLTFSPQKRISASDALLHPFF 295          
The following BLAST results are available for this feature:
BLAST of CN186082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
MDE3_SCHPO6.515e-1729.41Sporulation protein kinase mde3 OS=Schizosaccharom... [more]
JNK1_ANCCA6.515e-1733.54Stress-activated protein kinase JNK-1 OS=Ancylosto... [more]
MK10_MOUSE8.509e-1732.32Mitogen-activated protein kinase 10 OS=Mus musculu... [more]
CSK2A_CAEEL8.509e-1732.37Casein kinase II subunit alpha OS=Caenorhabditis e... [more]
CSK22_CHICK8.509e-1731.52Casein kinase II subunit alpha' OS=Gallus gallus P... [more]
CDKC1_ORYSJ8.509e-1734.16Cyclin-dependent kinase C-1 OS=Oryza sativa subsp.... [more]
BUR1_CANAL8.509e-1733.79Serine/threonine-protein kinase BUR1 OS=Candida al... [more]
MK08_MOUSE1.111e-1631.33Mitogen-activated protein kinase 8 OS=Mus musculus... [more]
MK08_HUMAN1.111e-1631.33Mitogen-activated protein kinase 8 OS=Homo sapiens... [more]
CDK4_XENLA1.111e-1634.67Cell division protein kinase 4 OS=Xenopus laevis G... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0002F10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186082 ID=CN186082; Name=CN186082; organism=Citrus sinensis; type=EST; length=734bp
AGTGTAAACCTTTTGGTTGATCCTCTTACTCACCAGGTTAACATTTGTGA
TTTTGGAAGTGCAAAACAGCTGATTGCTGGAGAAGCAAACATATCATACA
TATGTTCACGTTTCTATCGGGCTCCAGAACTTATATTTGGAGCTACAGAA
TATACAACCTCAATTGATATATGGTCAGCTGGTTGTGTGCTTGCCGAGCT
TCTTTTGGGCCAGCCATTATTTCCTGGAGAAAATGCAGTGGACCAGCTTG
TAGAGATTATCAAGGTTCTCGGTACACCCACTCGTGAAGAAATTCGCTGT
ATGAATCCAAATTATACCGATTTTAGGTTTCCACAGATTAAAGCACATCC
TTGGCACAAGGTTTTCCACAAACGGATGCCTCCTGAGGCTATTGATCTTG
CTTCACGCCTGTTGCAGTATTCACCAAGTCTCCGATGTACAGCGCTAGAA
GCATGTGCACATCCTTTCTTTGATGAACTGCGTGAGCCAAATGCTCGCCT
ACCAAATGGCCGCCCACTGCCACCTCTCTTCAACTTTAAACAGGAATTAT
CGGGGGCTTCACCAGAGCTTGTTAATAAGTTGATACCAGACCATGTGAAA
CGGCAATTAGGTCTGAATTTCTTGCATCCAGCCGGGACATAGGTCTAGAC
AAGTAATATAGAAGTGAAATCTACTTGGTGATGTGTAGCACAAAGGGAAT
TATATCCTTGTTCGTAACTGCCATGCATTGAGGC
back to top