CN186082

Overview
NameCN186082
Unique NameCN186082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10238 contig Csv1_Contig10238:699..1432. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: PPK15_SCHPO (Serine/threonine-protein kinase ppk15 OS=Schizosaccharomyces pombe GN=ppk15 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14
Identity = 44/90 (48.89%), Postives = 56/90 (62.22%), Query Frame = 1
Query:   10 LLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTP 279
            LL D  +  V + DFGSA      +   +YI SRFYR+PE+I G   Y   ID+WS GC+LAEL LG PLFPG +  +QL  I+ +LG P
Sbjct:  264 LLQDLSSPIVKVIDFGSACH--ERQTVYTYIQSRFYRSPEVILGL-HYNCGIDMWSLGCILAELFLGLPLFPGNSEYNQLCRIVDMLGNP 350          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDKL3_MACFA (Cyclin-dependent kinase-like 3 OS=Macaca fascicularis GN=CDKL3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14
Identity = 48/149 (32.21%), Postives = 78/149 (52.35%), Query Frame = 1
Query:   43 ICDFGSAKQLIA-GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG--TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFF 471
            +CDFG A+ L A G+    Y+ +R+YRAPEL+   T Y   +DIW+ GC++ E+  G P  P  + +D L +I+  +G  +P  + I   +P +     PQ++ HP  K   K+ P       D+    LQ  P+ R ++ +   H +F
Sbjct:  141 LCDFGFARTLAAPGDIYTDYVATRWYRAPELVLKDTSYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLSPHLQNIFSKSPIFAGVVLPQVQ-HP--KNARKKYPKLNGLLADIVHACLQIDPADRISSSDLLHHEYF 286          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDKL3_HUMAN (Cyclin-dependent kinase-like 3 OS=Homo sapiens GN=CDKL3 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.040e-14
Identity = 48/149 (32.21%), Postives = 78/149 (52.35%), Query Frame = 1
Query:   43 ICDFGSAKQLIA-GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLG--TPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPP---EAIDLASRLLQYSPSLRCTALEACAHPFF 471
            +CDFG A+ L A G+    Y+ +R+YRAPEL+   T Y   +DIW+ GC++ E+  G P  P  + +D L +I+  +G  +P  + I   +P +     PQ++ HP  K   K+ P       D+    LQ  P+ R ++ +   H +F
Sbjct:  141 LCDFGFARTLAAPGDIYTDYVATRWYRAPELVLKDTSYGKPVDIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLSPHLQNIFSKSPIFAGVVLPQVQ-HP--KNARKKYPKLNGLLADIVHACLQIDPADRISSSDLLHHEYF 286          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: SSN3_YEAST (Meiotic mRNA stability protein kinase SSN3 OS=Saccharomyces cerevisiae GN=SSN3 PE=1 SV=3)

HSP 1 Score: 80.1073 bits (196), Expect = 1.358e-14
Identity = 51/138 (36.96%), Postives = 72/138 (52.17%), Query Frame = 1
Query:  112 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA-----------VDQLVEIIKVLGTPTREEIRCMN--PNYTDF-RFPQIKAH--PWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 477
            +YRAPEL+ GA  YT ++D+WS GC+ AEL+  QP+F GE A           V+QL  I++VLGTP ++    +   P Y    +FP+ + +   W+     R    A+ L   LL Y P  R  A  A  H +F E
Sbjct:  329 WYRAPELLLGARHYTPAVDLWSVGCIFAELIGLQPIFKGEEAKLDSKKTVPFQVNQLQRILEVLGTPDQKIWPYLEKYPEYDQITKFPKYRDNLATWYHSAGGR-DKHALSLLYHLLNYDPIKRIDAFNALEHKYFTE 465          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MK06_RAT (Mitogen-activated protein kinase 6 OS=Rattus norvegicus GN=Mapk6 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.358e-14
Identity = 52/166 (31.33%), Postives = 89/166 (53.61%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYIC----SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ---LVEIIKVLGTPTREEIRCMNPNY--TDFRFPQIKAHPWHKVFHKRMP---PEAIDLASRLLQYSPSLRCTALEACAHPF 468
            NL ++     + I DFG A+ +    ++  ++     +++YR+P L+     YT +ID+W+AGC+ AE+L G+ LF G + ++Q   ++E I V+    R+E+  + P Y   D   P       HK   + +P    EA+D   ++L +SP  R TA EA +HP+
Sbjct:  157 NLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEP-------HKPLTQLLPGISREALDFLEQILTFSPMDRLTAEEALSHPY 315          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MK06_PONAB (Mitogen-activated protein kinase 6 OS=Pongo abelii GN=MAPK6 PE=2 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.358e-14
Identity = 52/166 (31.33%), Postives = 89/166 (53.61%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYIC----SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ---LVEIIKVLGTPTREEIRCMNPNY--TDFRFPQIKAHPWHKVFHKRMP---PEAIDLASRLLQYSPSLRCTALEACAHPF 468
            NL ++     + I DFG A+ +    ++  ++     +++YR+P L+     YT +ID+W+AGC+ AE+L G+ LF G + ++Q   ++E I V+    R+E+  + P Y   D   P       HK   + +P    EA+D   ++L +SP  R TA EA +HP+
Sbjct:  157 NLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEP-------HKPLTQLLPGISREALDFLEQILTFSPMDRLTAEEALSHPY 315          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MK06_HUMAN (Mitogen-activated protein kinase 6 OS=Homo sapiens GN=MAPK6 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.358e-14
Identity = 52/166 (31.33%), Postives = 89/166 (53.61%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYIC----SRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQ---LVEIIKVLGTPTREEIRCMNPNY--TDFRFPQIKAHPWHKVFHKRMP---PEAIDLASRLLQYSPSLRCTALEACAHPF 468
            NL ++     + I DFG A+ +    ++  ++     +++YR+P L+     YT +ID+W+AGC+ AE+L G+ LF G + ++Q   ++E I V+    R+E+  + P Y   D   P       HK   + +P    EA+D   ++L +SP  R TA EA +HP+
Sbjct:  157 NLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEP-------HKPLTQLLPGISREALDFLEQILTFSPMDRLTAEEALSHPY 315          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDKF1_ARATH (Cyclin-dependent kinase F-1 OS=Arabidopsis thaliana GN=CDKF-1 PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.774e-14
Identity = 44/131 (33.59%), Postives = 73/131 (55.73%), Query Frame = 1
Query:   94 SYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEI--RCMN-PNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDE 477
            S + +R++R PEL++G+T Y   +D+WS GCV AELL  +PLFPG + +DQ+  +  VLG    EE+   C++ P+Y    F ++++    +        + I L  +L+ Y P+ R T +E     +  E
Sbjct:  291 SCVGTRWFRPPELLYGSTMYGLEVDLWSLGCVFAELLSLEPLFPGISDIDQISRVTNVLGN-LNEEVWPGCVDLPDYKSISFAKVESPLGIEGCLPNHSGDVISLLKKLICYDPASRATTMEMLNDKYLSE 420          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: SSN3_CANGA (Serine/threonine-protein kinase SSN3 OS=Candida glabrata GN=SSN3 PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.026e-14
Identity = 51/138 (36.96%), Postives = 72/138 (52.17%), Query Frame = 1
Query:  112 FYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENA-----------VDQLVEIIKVLGTPTREEIRCMN--PNYTDF-RFPQIKAH--PWHKVFHKR--MPPEAIDLASRLLQYSPSLRCTALEACAHPFF 471
            +YRAPEL+ GA  YT +ID+W+ GC+ AEL+  QP+F GE A            +QL  I+K+LGTPT +    +   P Y    +FP+ + +   W   FH        A+ L   LL Y+P  R  A+ A  H +F
Sbjct:  336 WYRAPELLLGARHYTPAIDLWAVGCIFAELIGLQPIFKGEEAKMDSKKTVPFQANQLQRILKILGTPTPKSWPHLQKYPEYEQLSKFPKYRDNLPGW---FHSAGGRDKHALSLLYHLLNYNPIERIDAINALDHSYF 470          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CTK1_YEAST (CTD kinase subunit alpha OS=Saccharomyces cerevisiae GN=CTK1 PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.026e-14
Identity = 52/185 (28.11%), Postives = 86/185 (46.49%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPW----------------HKVFHKRMP-PEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNG 510
            N+L+D   + + I DFG A+++ +     + + + +YR PEL+ G T Y T +D+W  GC+L EL     +F G N ++Q+  I K++GTPT               +P +   PW                 + F   +P  + + LA  LL Y  + R +A EA    +F E  +P   + +G
Sbjct:  311 NILIDNQGN-LKITDFGLARKMNSRADYTNRVITLWYRPPELLLGTTNYGTEVDMWGCGCLLVELFNKTAIFQGSNELEQIESIFKIMGTPTINS------------WPTLYDMPWFFMIMPQQTTKYVNNFSEKFKSVLPSSKCLQLAINLLCYDQTKRFSATEALQSDYFKEEPKPEPLVLDG 482          
The following BLAST results are available for this feature:
BLAST of CN186082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PPK15_SCHPO1.040e-1448.89Serine/threonine-protein kinase ppk15 OS=Schizosac... [more]
CDKL3_MACFA1.040e-1432.21Cyclin-dependent kinase-like 3 OS=Macaca fascicula... [more]
CDKL3_HUMAN1.040e-1432.21Cyclin-dependent kinase-like 3 OS=Homo sapiens GN=... [more]
SSN3_YEAST1.358e-1436.96Meiotic mRNA stability protein kinase SSN3 OS=Sacc... [more]
MK06_RAT1.358e-1431.33Mitogen-activated protein kinase 6 OS=Rattus norve... [more]
MK06_PONAB1.358e-1431.33Mitogen-activated protein kinase 6 OS=Pongo abelii... [more]
MK06_HUMAN1.358e-1431.33Mitogen-activated protein kinase 6 OS=Homo sapiens... [more]
CDKF1_ARATH1.774e-1433.59Cyclin-dependent kinase F-1 OS=Arabidopsis thalian... [more]
SSN3_CANGA3.026e-1436.96Serine/threonine-protein kinase SSN3 OS=Candida gl... [more]
CTK1_YEAST3.026e-1428.11CTD kinase subunit alpha OS=Saccharomyces cerevisi... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186082 ID=CN186082; Name=CN186082; organism=Citrus sinensis; type=EST; length=734bp
AGTGTAAACCTTTTGGTTGATCCTCTTACTCACCAGGTTAACATTTGTGA
TTTTGGAAGTGCAAAACAGCTGATTGCTGGAGAAGCAAACATATCATACA
TATGTTCACGTTTCTATCGGGCTCCAGAACTTATATTTGGAGCTACAGAA
TATACAACCTCAATTGATATATGGTCAGCTGGTTGTGTGCTTGCCGAGCT
TCTTTTGGGCCAGCCATTATTTCCTGGAGAAAATGCAGTGGACCAGCTTG
TAGAGATTATCAAGGTTCTCGGTACACCCACTCGTGAAGAAATTCGCTGT
ATGAATCCAAATTATACCGATTTTAGGTTTCCACAGATTAAAGCACATCC
TTGGCACAAGGTTTTCCACAAACGGATGCCTCCTGAGGCTATTGATCTTG
CTTCACGCCTGTTGCAGTATTCACCAAGTCTCCGATGTACAGCGCTAGAA
GCATGTGCACATCCTTTCTTTGATGAACTGCGTGAGCCAAATGCTCGCCT
ACCAAATGGCCGCCCACTGCCACCTCTCTTCAACTTTAAACAGGAATTAT
CGGGGGCTTCACCAGAGCTTGTTAATAAGTTGATACCAGACCATGTGAAA
CGGCAATTAGGTCTGAATTTCTTGCATCCAGCCGGGACATAGGTCTAGAC
AAGTAATATAGAAGTGAAATCTACTTGGTGATGTGTAGCACAAAGGGAAT
TATATCCTTGTTCGTAACTGCCATGCATTGAGGC
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