CN186082

Overview
NameCN186082
Unique NameCN186082
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length734
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10238 contig Csv1_Contig10238:699..1432. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDK5_DICDI (Cell division protein kinase 5 homolog OS=Dictyostelium discoideum GN=cdk5 PE=2 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 1.109e-24
Identity = 66/166 (39.76%), Postives = 96/166 (57.83%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISY-ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMN--PNY-TDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPN 492
            NLL++    ++ + DFG A+         S+ + + +YRAP+++ G+ +Y+T IDIWSAGC+ AE+  G+PLFPG    DQL  I K+LGTP  E    +   P Y TD  FP   AH    + H  +  + ++L S++LQY P+ R TA  A  HP+FD L   N
Sbjct:  131 NLLINR-KGELKLADFGLARAFGIPVRTYSHEVVTLWYRAPDVLMGSRKYSTPIDIWSAGCIFAEMASGRPLFPGSGTSDQLFRIFKILGTPNEESWPSITELPEYKTD--FPVHPAHQLSSIVH-GLDEKGLNLLSKMLQYDPNQRITAAAALKHPYFDGLEPIN 292          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: NTF4_TOBAC (Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum GN=NTF4 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.891e-24
Identity = 64/189 (33.86%), Postives = 102/189 (53.97%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR----EPNARLPNGRPLPPLFNFKQELSGASPELVNKLI 585
            + ICDFG A+     +    Y+ +R+YRAPEL+  +++YT +ID+WS GC+  EL+  +PLFPG + V QL  +++++GTP+  E+  +N N   +  + P  +   + + F   + P AIDL  ++L + P  R T  +A AHP+   L     EP    P        FNF  E    + E + +LI
Sbjct:  200 LKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEAEMEFLNENAKRYIRQLPLYRRQSFVEKF-PHVNPAAIDLVEKMLTFDPRRRITVEDALAHPYLTSLHDISDEPVCMTP--------FNFDFEQHALTEEQMKELI 379          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSJ (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. japonica GN=MPK5 PE=1 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.891e-24
Identity = 58/153 (37.91%), Postives = 89/153 (58.17%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE---IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 486
            + ICDFG A+     +    Y+ +R+YRAPEL+  +T+Y+ +ID+WS GC+  EL+  QPLFPG + + Q+  I +V+GTPT +E   IR  +        PQ     +  +F  R+ P A+DL  R+L ++P  R T  EA  HP+ + L +
Sbjct:  176 LKICDFGLARPSSESDMMTEYVVTRWYRAPELLLNSTDYSAAIDVWSVGCIFMELINRQPLFPGRDHMHQMRLITEVIGTPTDDELGFIRNEDARKYMRHLPQYPRRTFASMF-PRVQPAALDLIERMLTFNPLQRITVEEALDHPYLERLHD 327          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MPK5_ORYSI (Mitogen-activated protein kinase 5 OS=Oryza sativa subsp. indica GN=MPK5 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.891e-24
Identity = 58/153 (37.91%), Postives = 89/153 (58.17%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREE---IRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELRE 486
            + ICDFG A+     +    Y+ +R+YRAPEL+  +T+Y+ +ID+WS GC+  EL+  QPLFPG + + Q+  I +V+GTPT +E   IR  +        PQ     +  +F  R+ P A+DL  R+L ++P  R T  EA  HP+ + L +
Sbjct:  176 LKICDFGLARPSSESDMMTEYVVTRWYRAPELLLNSTDYSAAIDVWSVGCIFMELINRQPLFPGRDHMHQMRLITEVIGTPTDDELGFIRNEDARKYMRHLPQYPRRTFASMF-PRVQPAALDLIERMLTFNPLQRITVEEALDHPYLERLHD 327          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CKB21_ARATH (Cyclin-dependent kinase B2-1 OS=Arabidopsis thaliana GN=CDKB2-1 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 1.891e-24
Identity = 59/164 (35.98%), Postives = 94/164 (57.32%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLIAGEANISY-ICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNA 495
            NLL+DP T ++ I D G A+         ++ I + +YRAPE++ GAT Y+T++D+WS GC+ AEL+  Q +F G++ + QL+ I K+ GTP  E    ++       +PQ K           +    +DL S++LQY P+ R +A  A  HP+FD+L E ++
Sbjct:  150 NLLMDPKTMRLKIADLGLARAFTLPMKKYTHEILTLWYRAPEVLLGATHYSTAVDMWSVGCIFAELVTNQAIFQGDSELQQLLHIFKLFGTPNEEMWPGVSTLKNWHEYPQWKPSTLSSAV-PNLDEAGVDLLSKMLQYEPAKRISAKMAMEHPYFDDLPEKSS 312          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDK20_MOUSE (Cell division protein kinase 20 OS=Mus musculus GN=Cdk20 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.891e-24
Identity = 75/217 (34.56%), Postives = 112/217 (51.61%), Query Frame = 1
Query:    7 NLLVDPLTHQVNICDFGSAKQLI--AGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTRE---EIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF---------DEL---REPNARLPNGRPLPP-LFNF----KQELSGASPELVNKLIPD 591
            NLL+   + Q+ I DFG A+      G      + +R+YRAPEL++GA +Y   +D+W+ GC++ ELL G PLFPGEN ++QL  ++++LGTP+     EI  + P+Y    F +    P  +V      P+A+DL  + L Y P  R  A +A  H +F          EL   + P    P   P PP + +F      E S  +PEL+   IP+
Sbjct:  132 NLLISA-SGQLKIADFGLARVFSPDGGRLYTHQVATRWYRAPELLYGARQYDQGVDLWAVGCIMGELLNGSPLFPGENDIEQLCCVLRILGTPSPRVWPEITEL-PDYNKISFKEQAPVPLEEVL-PDASPQALDLLGQFLLYPPRQRIAASQALLHQYFFTAPLPAHPSELPIPQRPGGPAPKAHPGPPHVHDFHVDRPLEESLLNPELIRPFIPE 345          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MPK3_ARATH (Mitogen-activated protein kinase 3 OS=Arabidopsis thaliana GN=MPK3 PE=1 SV=2)

HSP 1 Score: 112.464 bits (280), Expect = 2.470e-24
Identity = 62/186 (33.33%), Postives = 103/186 (55.38%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIR-CMNPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELREPNARLPNGRPLPPLFNFKQELSGASPELVNKLI 585
            + ICDFG A+     +    Y+ +R+YRAPEL+  +++YT +ID+WS GC+  EL+  +PLFPG++ V Q+  + ++LGTPT  ++    N +   +  + P     P  K+F   + P AIDL  R+L + P+ R T  +A  H +  +L +PN      +P    F+F+ E      E + ++I
Sbjct:  178 LKICDFGLARPTSENDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMNRKPLFPGKDHVHQMRLLTELLGTPTESDLGFTHNEDAKRYIRQLPNFPRQPLAKLF-SHVNPMAIDLVDRMLTFDPNRRITVEQALNHQYLAKLHDPNDEPICQKP----FSFEFEQQPLDEEQIKEMI 358          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDKL2_PONAB (Cyclin-dependent kinase-like 2 OS=Pongo abelii GN=CDKL2 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.470e-24
Identity = 56/148 (37.84%), Postives = 85/148 (57.43%), Query Frame = 1
Query:   37 VNICDFGSAKQLIA-GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT--PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 471
            V +CDFG A+ L A GE    Y+ +R+YRAPEL+ G  +Y  ++D+W+ GC++ E+ +G+PLFPG++ +DQL  I+  LG   P  +E+   NP +   R P+IK     +  + ++    IDLA + L   P  R    E   H FF
Sbjct:  140 VKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFYKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFF 287          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: MAPK_PEA (Mitogen-activated protein kinase homolog D5 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.226e-24
Identity = 63/189 (33.33%), Postives = 102/189 (53.97%), Query Frame = 1
Query:   37 VNICDFGSAKQLIAGEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGTPTREEIRCMNPNYTDF--RFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFFDELR----EPNARLPNGRPLPPLFNFKQELSGASPELVNKLI 585
            + ICDFG A+     +    Y+ +R+YRAPEL+  +++YT +ID+WS GC+  EL+  +PLFPG + V QL  +++++GTP+  ++  +N N   +  + P  +   + + F   + PEAIDL  ++L + P  R T   A AHP+   L     EP    P        F+F  E    + E + +LI
Sbjct:  202 LKICDFGLARVTSETDFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFMELMDRKPLFPGRDHVHQLRLLMELIGTPSEADLGFLNENAKRYIRQLPLYRRQSFQEKF-PHVHPEAIDLVEKMLTFDPRQRITVENALAHPYLTSLHDISDEPVCTTP--------FSFDFEQHALTEEQMKELI 381          
BLAST of CN186082 vs. ExPASy Swiss-Prot
Match: CDKL2_MACFA (Cyclin-dependent kinase-like 2 OS=Macaca fascicularis GN=CDKL2 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.226e-24
Identity = 56/148 (37.84%), Postives = 85/148 (57.43%), Query Frame = 1
Query:   37 VNICDFGSAKQLIA-GEANISYICSRFYRAPELIFGATEYTTSIDIWSAGCVLAELLLGQPLFPGENAVDQLVEIIKVLGT--PTREEIRCMNPNYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHPFF 471
            V +CDFG A+ L A GE    Y+ +R+YRAPEL+ G  +Y  ++D+W+ GC++ E+ +G+PLFPG++ +DQL  I+  LG   P  +E+   NP +   R P+IK     +  + ++    IDLA + L   P  R    E   H FF
Sbjct:  140 VKLCDFGFARTLAAPGEVYTDYVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFYKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCSELLHHDFF 287          
The following BLAST results are available for this feature:
BLAST of CN186082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK5_DICDI1.109e-2439.76Cell division protein kinase 5 homolog OS=Dictyost... [more]
NTF4_TOBAC1.891e-2433.86Mitogen-activated protein kinase homolog NTF4 OS=N... [more]
MPK5_ORYSJ1.891e-2437.91Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
MPK5_ORYSI1.891e-2437.91Mitogen-activated protein kinase 5 OS=Oryza sativa... [more]
CKB21_ARATH1.891e-2435.98Cyclin-dependent kinase B2-1 OS=Arabidopsis thalia... [more]
CDK20_MOUSE1.891e-2434.56Cell division protein kinase 20 OS=Mus musculus GN... [more]
MPK3_ARATH2.470e-2433.33Mitogen-activated protein kinase 3 OS=Arabidopsis ... [more]
CDKL2_PONAB2.470e-2437.84Cyclin-dependent kinase-like 2 OS=Pongo abelii GN=... [more]
MAPK_PEA3.226e-2433.33Mitogen-activated protein kinase homolog D5 OS=Pis... [more]
CDKL2_MACFA3.226e-2437.84Cyclin-dependent kinase-like 2 OS=Macaca fascicula... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186082 ID=CN186082; Name=CN186082; organism=Citrus sinensis; type=EST; length=734bp
AGTGTAAACCTTTTGGTTGATCCTCTTACTCACCAGGTTAACATTTGTGA
TTTTGGAAGTGCAAAACAGCTGATTGCTGGAGAAGCAAACATATCATACA
TATGTTCACGTTTCTATCGGGCTCCAGAACTTATATTTGGAGCTACAGAA
TATACAACCTCAATTGATATATGGTCAGCTGGTTGTGTGCTTGCCGAGCT
TCTTTTGGGCCAGCCATTATTTCCTGGAGAAAATGCAGTGGACCAGCTTG
TAGAGATTATCAAGGTTCTCGGTACACCCACTCGTGAAGAAATTCGCTGT
ATGAATCCAAATTATACCGATTTTAGGTTTCCACAGATTAAAGCACATCC
TTGGCACAAGGTTTTCCACAAACGGATGCCTCCTGAGGCTATTGATCTTG
CTTCACGCCTGTTGCAGTATTCACCAAGTCTCCGATGTACAGCGCTAGAA
GCATGTGCACATCCTTTCTTTGATGAACTGCGTGAGCCAAATGCTCGCCT
ACCAAATGGCCGCCCACTGCCACCTCTCTTCAACTTTAAACAGGAATTAT
CGGGGGCTTCACCAGAGCTTGTTAATAAGTTGATACCAGACCATGTGAAA
CGGCAATTAGGTCTGAATTTCTTGCATCCAGCCGGGACATAGGTCTAGAC
AAGTAATATAGAAGTGAAATCTACTTGGTGATGTGTAGCACAAAGGGAAT
TATATCCTTGTTCGTAACTGCCATGCATTGAGGC
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