CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SOLUE (Anthranilate phosphoribosyltransferase OS=Solibacter usitatus (strain Ellin6076) GN=trpD PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.079e-29
Identity = 77/175 (44.00%), Postives = 101/175 (57.71%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV----EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+    L+ A+A+A++  +L  EA  A I+AFL+ L+ KGET  E+VG ARAM   A  V    EG    +D  GTGGDGA T NIST A+ + AA G  VAK             D+LEA G+ + + PE     + E GIGF+ +   H AMK   PVR  LK++TVFN+LGP
Sbjct:   10 LVEEQHLSAADAEAAMQIVLRGEASHAQIAAFLIALKMKGETVDELVGFARAMRAMAVPVSPNLEG-ATLLDTCGTGGDGAGTFNISTVAAFVVAAAGVHVAKHGNRSITSKCGSADLLEAWGIPVAMPPEATAFAIREVGIGFLFAPAVHTAMKHAHPVRVDLKLRTVFNLLGP 183          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPU (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida GN=trpD PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.079e-29
Identity = 73/173 (42.20%), Postives = 101/173 (58.38%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++ ++DLT  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H AMK     R+ L ++T+FN+LGP
Sbjct:   10 IVGQLDLTTEEMRDVMRQIMTGQCTEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFMFAQSHHSAMKHAAGPRRDLGLRTLFNMLGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_METS3 (Anthranilate phosphoribosyltransferase OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=trpD PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.079e-29
Identity = 74/176 (42.05%), Postives = 106/176 (60.23%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E I  +++  DL   EA  ++D +++ E+ E  +SA+L  L  KGET  EI    +AM  +  K+    + ++IVGTGGDG+NT NIST +SI+ +A G  VAK             DVLEALGV I ++PE   + + E  + F+ +  YH AMKFV  VRK+L ++T+FNILGP
Sbjct:    4 EAILKVVNGNDLNAKEAYGAMDEIMSGESSEVQMSAYLTALSMKGETIEEITASTKAMRAHCVKLLNDEEVLEIVGTGGDGSNTFNISTTSSIVISAAGVPVAKHGNRSASSKCGAADVLEALGVNIYIEPEKSLKILKEINLCFLFAQNYHLAMKFVAGVRKELSIRTIFNILGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_METPP (Anthranilate phosphoribosyltransferase OS=Methylibium petroleiphilum (strain PM1) GN=trpD PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.079e-29
Identity = 75/152 (49.34%), Postives = 92/152 (60.53%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA---VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E    +I+A  V LR K E+ GEI   A  M ++A  V  + D    VD+ GTGGD A+T NIST A  +AAA GA+VAK             DVLEALG  IDL P  V  C+ E+GIGFM +  +HPAMK   PVRK+L V+T+FNILGP
Sbjct:   33 EMSPVMIAALAVGLRVKKESIGEIAAAATVMREFATPVP-VADTEHLVDLCGTGGDAAHTFNISTTAMFVAAAAGARVAKHGGRSVSSTSGSADVLEALGASIDLAPAQVAECLAESGIGFMFAPNHHPAMKHAGPVRKELGVRTIFNILGP 183          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_COREF (Anthranilate phosphoribosyltransferase OS=Corynebacterium efficiens GN=trpD PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.079e-29
Identity = 69/153 (45.10%), Postives = 94/153 (61.44%), Query Frame = 2
Query:  254 LNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAK--VEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + E D+  I+A L  +R +GETF +I G A+A +       V G G  +D  GTGGDGANT+NI+TGAS++AAA G KV K             DVLEAL + +DLDPE  +R  + +   F+ +  Y+PA+   +PVRK LKV T+FN+LGP
Sbjct:   33 IGEYDDVHIAALLATIRTRGETFADIAGAAKAFLNAGRPFPVPGTG-VLDTAGTGGDGANTINITTGASLVAAAGGLKVVKHGNRSVSSKSGSADVLEALNIPLDLDPERAQRWFEASNFTFLFAPAYNPAIAHAQPVRKALKVPTIFNVLGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_XYLFA (Anthranilate phosphoribosyltransferase OS=Xylella fastidiosa GN=trpD PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.409e-29
Identity = 75/176 (42.61%), Postives = 103/176 (58.52%), Query Frame = 2
Query:  188 IDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + C+I   ++ + E    +  ++N E    +++A L  LR K ET GEI G A  M +++ KV  +     VDIVGTGGDG +T NIST A  +AAA GAKVAK             DVLEALG  I+L P  V   +   G+GFM +  +HP M+ V PVR+++ V+T+FNILGP
Sbjct:    9 LQCIIEHREILQDEMVQLMRQIMNAEVSGIMVAAILAGLRVKKETVGEIAGAATVMREFSRKVNVQDRTHLVDIVGTGGDGWHTFNISTCAMFVAAAAGAKVAKHGNRSVSSKSGSADVLEALGASIELQPLEVAEVIGCIGVGFMFAPIHHPVMQVVSPVRREMGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_VIBVY (Anthranilate phosphoribosyltransferase OS=Vibrio vulnificus (strain YJ016) GN=trpD PE=3 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.409e-29
Identity = 72/176 (40.91%), Postives = 103/176 (58.52%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +I+ L  +  LTE E+Q   D ++  E D  L+++ L  L+ KGET  EI G A+A++  A        D  DIVGTGGDG NT+NIST A+ +AAACG KVAK             D+L++ G+ + +  E  R  VD  G+ F+ + +YH  +K   PVR+ +K +T+FNILGP
Sbjct:    4 IINKLYLQESLTEQESQQLFDTIIRGELDPILMASALTALKIKGETPDEIAGAAKALLANAQPFPRPDYDFADIVGTGGDGHNTINISTTAAFVAAACGLKVAKHGNRSVSSKSGSSDLLDSFGINLAMSAEDTRSAVDSIGVAFLFAPQYHSGVKHAMPVRQTMKTRTIFNILGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_VIBPA (Anthranilate phosphoribosyltransferase OS=Vibrio parahaemolyticus GN=trpD PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.409e-29
Identity = 70/176 (39.77%), Postives = 105/176 (59.66%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +I+ L  +  LT+ E+Q   D ++  E D  L+++ L  L+ KGET  EI G A+A++  A        D  DIVGTGGDG NT+NIST A+ +AAACG KVAK             D+L++ G+ + +  E  R+ VD+ G+ F+ + +YH  ++   PVR+ +K +T+FNILGP
Sbjct:    4 IINKLYEQQSLTQEESQQLFDIIIRGELDPILMASALTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGHNTINISTTAAFVAAACGLKVAKHGNRSVSSKSGSSDLLDSFGINLAMSAEDTRKAVDDIGVAFLFAPQYHGGVRHAMPVRQTMKTRTIFNILGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PSEFS (Anthranilate phosphoribosyltransferase OS=Pseudomonas fluorescens (strain SBW25) GN=trpD PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.409e-29
Identity = 71/173 (41.04%), Postives = 100/173 (57.80%), Query Frame = 2
Query:  197 LISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++  +DL+ AE +    + +  +  +A I AF++ +R K E+  EIVG    M + A KVE   L   VD+VGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H AMK     RK L ++T+FN+LGP
Sbjct:   10 IVGHLDLSTAEMSDVMREIMTGQCTDAQIGAFMMAMRMKSESIDEIVGAVSVMRELADKVELKTLDGVVDVVGTGGDGANIFNVSTASSFVVAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDNVGIGFMFAQSHHGAMKHAAGPRKDLGLRTLFNMLGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PSEF5 (Anthranilate phosphoribosyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=trpD PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.409e-29
Identity = 69/173 (39.88%), Postives = 103/173 (59.54%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++  +DL+  E ++ + + +  +  +A I AF++ +R K E+  EIVG   AM + A +VE   L   VD+VGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H AMK+    R+ L ++T+FN+LGP
Sbjct:   10 IVGHLDLSTEEMRSVMREIMTGQCTDAQIGAFMMAMRMKSESIDEIVGAVSAMRELADRVELKTLDGVVDVVGTGGDGANIFNVSTASSFVVAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDNVGIGFMFAQSHHGAMKYAAGPRRDLGLRTLFNMLGP 182          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_SOLUE1.079e-2944.00Anthranilate phosphoribosyltransferase OS=Solibact... [more]
TRPD_PSEPU1.079e-2942.20Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_METS31.079e-2942.05Anthranilate phosphoribosyltransferase OS=Methanob... [more]
TRPD_METPP1.079e-2949.34Anthranilate phosphoribosyltransferase OS=Methylib... [more]
TRPD_COREF1.079e-2945.10Anthranilate phosphoribosyltransferase OS=Coryneba... [more]
TRPD_XYLFA1.409e-2942.61Anthranilate phosphoribosyltransferase OS=Xylella ... [more]
TRPD_VIBVY1.409e-2940.91Anthranilate phosphoribosyltransferase OS=Vibrio v... [more]
TRPD_VIBPA1.409e-2939.77Anthranilate phosphoribosyltransferase OS=Vibrio p... [more]
TRPD_PSEFS1.409e-2941.04Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEF51.409e-2939.88Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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