CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SALTO (Anthranilate phosphoribosyltransferase OS=Salinispora tropica (strain ATCC BAA-916 / DSM 44818 / CNB-440) GN=trpD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.353e-31
Identity = 81/179 (45.25%), Postives = 104/179 (58.10%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV----EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+  L+   +L  A+ A A  + +   A  A I+ F V LRAKGET  E+ GL  AM+ +A  V    E    AVD+VGTGGD A+TVNIST AS++ A  G +V K             DVLE LG+ +DL PE V  CV EAGIGF  + ++HP M+   PVR++L V T FN LGP
Sbjct:    9 LLAALLRGDELCTADTAWAMGEIMSGSAGPAQIAGFAVALRAKGETPTELAGLVEAMLTHAVPVNLPAELRATAVDVVGTGGDLAHTVNISTMASLVVAGAGVRVVKHGNRAASSSCGTADVLEFLGLPLDLGPEAVATCVAEAGIGFCFAARFHPGMRHAGPVRRELGVPTAFNFLGP 187          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_OLICO (Anthranilate phosphoribosyltransferase OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=trpD PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.353e-31
Identity = 74/178 (41.57%), Postives = 104/178 (58.43%), Query Frame = 2
Query:  176 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            F  ++  L     L+  EA A+ D+L++ EA  + I   L+ +R +GET  EI G    M     +V    DAVD+VGTGGDG+ +VN+ST A+ + A  G  VAK             DVL +LGV I+L PE V  C+ +AGIGFM +  +HPA++ V P RK+L  +T+FN+LGP
Sbjct:    4 FKAILAKLADGKSLSRDEAVAAFDHLMSGEATPSQIGGALMAMRVRGETVDEITGAVSTMRAKMLRVTAPDDAVDVVGTGGDGSGSVNVSTCAAFIVAGAGVPVAKHGNRAMSSKSGAADVLASLGVNIELTPEQVGACIAKAGIGFMFAPAHHPAIRHVGPTRKELGTRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD1_RALSO (Anthranilate phosphoribosyltransferase 1 OS=Ralstonia solanacearum GN=trpD1 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.353e-31
Identity = 76/153 (49.67%), Postives = 95/153 (62.09%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEG----LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E    + SA ++ LR K ET GEI   A  M ++A  V+     L   VDIVGTGGDGANT NIST +  +AAA GA++AK             DVLEALGV I L PE V + ++  GIGFM +  +HPAMK V P+RK+L V+T+FNILGP
Sbjct:   34 EMSPVIASALIMGLRVKKETIGEIAAAATVMREFATTVDVPAAILDHFVDIVGTGGDGANTFNISTASMFVAAAAGARIAKHGGRGVSSKSGSADVLEALGVNIMLTPEQVAQSIEAVGIGFMFAPNHHPAMKNVAPIRKELGVRTLFNILGP 186          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_THISH (Anthranilate phosphoribosyltransferase OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.380e-31
Identity = 74/177 (41.81%), Postives = 105/177 (59.32%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + I  +  R+DL+E E  A +  ++N EA  A +  FLV L  KGET  E+   AR M   A +VE   G  VD  GTGGD + + NIST ++++ AA G +VAK             DVLEA GV +DL PE V RC+++ G+GF+ + K+H AMK     R+++ V+T+FN+LGP
Sbjct:    5 QAIRAVTQRIDLSEQEMTAVMGLIMNGEATPAQMGGFLVGLAMKGETVDEVTAAARVMRDLATRVEVQAGHLVDTCGTGGDASGSFNISTASALVVAAAGGRVAKHGNRSVSSKSGSADVLEAAGVNLDLSPEQVARCIEQVGVGFLFAPKHHGAMKHAVGPRREMGVRTLFNVLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_THEPX (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter sp. (strain X514) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.380e-31
Identity = 77/177 (43.50%), Postives = 107/177 (60.45%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E I  ++S+ +L E EA A ++ +++  A  +LI   L+ LR KGE+  EI G A+AM   A K+E   D  +D  GTGGDG  T NIST  +I+A+A G KVAK             DVL  LG  I++ PE  +R ++E G+GF+ + KYH AMK V  +RK+L  +TVFN+LGP
Sbjct:    4 EAIKKIVSKENLEEREAYAVMNEIMSGNATPSLIGGILIGLRLKGESVEEITGFAKAMRDNAIKLELASDYVIDTCGTGGDGGKTFNISTAVAIIASAAGVKVAKHGNRAVSSKSGSADVLMELGFDIEMVPEKTKRLIEEKGMGFLFAPKYHVAMKNVAGIRKELGTRTVFNVLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_THEP3 (Anthranilate phosphoribosyltransferase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.380e-31
Identity = 77/177 (43.50%), Postives = 107/177 (60.45%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E I  ++S+ +L E EA A ++ +++  A  +LI   L+ LR KGE+  EI G A+AM   A K+E   D  +D  GTGGDG  T NIST  +I+A+A G KVAK             DVL  LG  I++ PE  +R ++E G+GF+ + KYH AMK V  +RK+L  +TVFN+LGP
Sbjct:    4 EAIKKIVSKENLEEREAYAVMNEIMSGNATPSLIGGILIGLRLKGESVEEITGFAKAMRDNAIKLELASDYVIDTCGTGGDGGKTFNISTAVAIIASAAGVKVAKHGNRAVSSKSGSADVLMELGFDIEMVPEKTKRLIEEKGMGFLFAPKYHVAMKNVAGIRKELGTRTVFNVLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_RHIEC (Anthranilate phosphoribosyltransferase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.380e-31
Identity = 75/169 (44.38%), Postives = 100/169 (59.17%), Query Frame = 2
Query:  203 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            SR  LT  EA+A+ D L++ +A  + I  FL+ LR +GE+  EIVG    M      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L ALGV ID+ PE + RC+ EA +GFM +  +H AM+ V P R +L  +T+FN+LGP
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGESVDEIVGAVTTMRSKMLTVEAPADAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLSALGVNIDVGPEIISRCIAEASVGFMFAQLHHSAMRHVGPSRVELGTRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_RHIE6 (Anthranilate phosphoribosyltransferase OS=Rhizobium etli (strain CIAT 652) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.380e-31
Identity = 75/169 (44.38%), Postives = 100/169 (59.17%), Query Frame = 2
Query:  203 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            SR  LT  EA+A+ D L++ +A  + I  FL+ LR +GE+  EIVG    M      VE   DA+DIVGTGGD + T NIST A+++ A  G  VAK             D L ALGV ID+ PE + RC+ EA +GFM +  +H AM+ V P R +L  +T+FN+LGP
Sbjct:   13 SREPLTRDEARAAFDILMSGQATPSQIGGFLMALRVRGESVDEIVGAVTTMRSKMLTVEAPADAIDIVGTGGDASGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGAADNLSALGVNIDVGPEIISRCIAEASVGFMFAQLHHSAMRHVGPSRVELGTRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_METM7 (Anthranilate phosphoribosyltransferase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.380e-31
Identity = 76/174 (43.68%), Postives = 107/174 (61.49%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +++ LI R +L+  E+    + LLNE+ E  I+A+LV L+ KG T  EI G A+AM   A K++ LG+  D  GTGGDG+ T+N+ST  SI+ + C  KVAK             +V EALG  I   PE  ++ +D+    F+ + KYHPA+K + PVR +LKVKT+FNILGP
Sbjct:    1 MLNKLIERENLSFEESYELFNMLLNES-EMRIAAYLVALQTKGVTADEIAGFAKAMRDNAVKID-LGEVTDTCGTGGDGSKTINVSTAVSIILS-CFTKVAKHGNVSITSKSGSANVYEALGCKIPETPEDAKKSMDKTNFAFLFAPKYHPALKKIMPVRNELKVKTIFNILGP 171          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_METM5 (Anthranilate phosphoribosyltransferase OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=trpD PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.380e-31
Identity = 77/174 (44.25%), Postives = 107/174 (61.49%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +++ LI R +L+  E+    + LLNE+ E  I+A+LV L+ KG T  EI G A+AM   A K++ LG+  D  GTGGDG+ T+N+ST  SI+ A C  KVAK             +V EALG  I   PE  ++ +D+    F+ + KYHPA+K + PVR +LKVKT+FNILGP
Sbjct:    1 MLNKLIERENLSFKESYELFNMLLNES-EMRIAAYLVALQTKGVTADEIAGFAKAMRDNAVKID-LGEVTDTCGTGGDGSKTINVSTAVSIILA-CFTKVAKHGNVSITSNSGSANVYEALGCKIPETPEDAKKSMDKTNFVFLFAQKYHPALKKIMPVRNELKVKTIFNILGP 171          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_SALTO3.353e-3145.25Anthranilate phosphoribosyltransferase OS=Salinisp... [more]
TRPD_OLICO3.353e-3141.57Anthranilate phosphoribosyltransferase OS=Oligotro... [more]
TRPD1_RALSO3.353e-3149.67Anthranilate phosphoribosyltransferase 1 OS=Ralsto... [more]
TRPD_THISH4.380e-3141.81Anthranilate phosphoribosyltransferase OS=Thioalka... [more]
TRPD_THEPX4.380e-3143.50Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_THEP34.380e-3143.50Anthranilate phosphoribosyltransferase OS=Thermoan... [more]
TRPD_RHIEC4.380e-3144.38Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_RHIE64.380e-3144.38Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_METM74.380e-3143.68Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_METM54.380e-3144.25Anthranilate phosphoribosyltransferase OS=Methanoc... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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