CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_MARMS (Anthranilate phosphoribosyltransferase OS=Marinomonas sp. (strain MWYL1) GN=trpD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.403e-29
Identity = 72/175 (41.14%), Postives = 99/175 (56.57%), Query Frame = 2
Query:  188 IDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            I  ++ R DL+  E Q  + D +  +A  A I  FL+ LR KGET  EI   A+ M   ++KV   L   VD  GTGGDG N  N+ST ++ + A+ G KVAK             DVLE  G+ + LD E V RCV+E G+GFM +  +H AMK+    RK++  +T+FN+LGP
Sbjct:    7 IAAVVERQDLSGGEMQVVMHDIMTGKATPAQIGGFLIGLRMKGETVEEITAAAQVMRSLSSKVHLDLEHVVDTCGTGGDGGNLFNVSTASAFVVASAGGKVAKHGGRSVSSKSGSADVLEQAGIYLGLDAEQVCRCVEEIGLGFMFAPNHHSAMKYAVGPRKEMATRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_HALLT (Anthranilate phosphoribosyltransferase OS=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) GN=trpD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.403e-29
Identity = 72/177 (40.68%), Postives = 101/177 (57.06%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA-VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N+ ++ +    DLT  EA+ +   +  EA EA I A L  LRAKGET  EI G A+ M   A  +E   +  VD  GTGGD  +T+N+ST A+I+AA  G  +AK             DVLE  G  ++ +P  V   ++  GIGFM++  +HPAMK V   RK+L ++T+FN+LGP
Sbjct:    4 NDTVERVTDGADLTVDEAREAARLVFEEATEAQIGALLAALRAKGETEAEIAGFAQGMRDAARTIEPDREPLVDTCGTGGDDYDTINVSTTAAIVAAGAGVPIAKHGNYSVSSSSGSADVLEVAGADVEAEPPAVEEAIETDGIGFMLAPVFHPAMKAVIGPRKELGMRTIFNVLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_DECAR (Anthranilate phosphoribosyltransferase OS=Dechloromonas aromatica (strain RCB) GN=trpD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.403e-29
Identity = 73/151 (48.34%), Postives = 90/151 (59.60%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E    +I+A +  LR K ET GEI   A  M + A  V+   D   VDIVGTGGD A+T NIS+ A+ + AA G KVAK             DVLEALG  I L PE V  C+DE G GFM +  +H AMK V PVR+++ V+T+FNILGP
Sbjct:   32 EVTPVMIAAIITGLRVKKETIGEIAAAASVMRELATPVKVPYDRHFVDIVGTGGDAAHTFNISSTAAFVVAAAGGKVAKHGGRSVSSSSGAADVLEALGANIMLSPEQVAACIDETGFGFMFAPNHHTAMKHVAPVRREMGVRTIFNILGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BURVG (Anthranilate phosphoribosyltransferase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=trpD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.403e-29
Identity = 72/146 (49.32%), Postives = 92/146 (63.01%), Query Frame = 2
Query:  275 LISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + +A +  LR K ET GEI   A  M ++A  VE   ++  VDIVGTGGDGA+T NIST +  + AA GAKVAK             DVLEALGV IDL P+ V   + E G+GFM +  +HPAMK +  VR++L V+T+FNILGP
Sbjct:   39 MAAAIITGLRVKKETIGEIAAAATVMREFAHHVEVPDNSNFVDIVGTGGDGAHTFNISTASMFVTAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPDQVAASIAETGMGFMFAPNHHPAMKNIAAVRRELGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BURCM (Anthranilate phosphoribosyltransferase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD) GN=trpD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.403e-29
Identity = 71/146 (48.63%), Postives = 93/146 (63.70%), Query Frame = 2
Query:  275 LISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + +A +  LR K ET GEI   A  M ++A  VE   ++  VDIVGTGGDG++T NIST +  +AAA GAKVAK             DVL+ALGV IDL P+ V   + E G+GFM +  +HPAMK +  VR++L V+T+FNILGP
Sbjct:   39 MAAAIITGLRVKKETIGEIAAAATVMREFANHVEVQDNSNFVDIVGTGGDGSHTFNISTASMFIAAAAGAKVAKHGNRGVSSKSGSADVLDALGVNIDLQPDQVAASIAETGMGFMFAPNHHPAMKNIAAVRRELGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BURA4 (Anthranilate phosphoribosyltransferase OS=Burkholderia ambifaria (strain MC40-6) GN=trpD PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.403e-29
Identity = 71/146 (48.63%), Postives = 93/146 (63.70%), Query Frame = 2
Query:  275 LISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + +A +  LR K ET GEI   A  M ++A  VE   ++  VDIVGTGGDG++T NIST +  +AAA GAKVAK             DVL+ALGV IDL P+ V   + E G+GFM +  +HPAMK +  VR++L V+T+FNILGP
Sbjct:   39 MAAAIITGLRVKKETIGEIAAAATVMREFANHVEVQDNSNFVDIVGTGGDGSHTFNISTASMFIAAAAGAKVAKHGNRGVSSKSGSADVLDALGVNIDLQPDQVAASIAETGMGFMFAPNHHPAMKNIAAVRRELGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_MYCSJ (Anthranilate phosphoribosyltransferase OS=Mycobacterium sp. (strain JLS) GN=trpD PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.139e-29
Identity = 77/184 (41.85%), Postives = 108/184 (58.70%), Query Frame = 2
Query:  167 TPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV--EGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            TP +  ++  L +  +L   +A  ++D ++   A  A I+ F V ++ K  T  E+  LA  M+K+A ++  + +G + VDIVGTGGDGANTVN+ST A+I+ AA G  V K             D LEALGV IDL PE V   V E GIGF  + ++HP+ K    VR++L V TVFN+LGP
Sbjct:   11 TPTWPSILGRLTTGQNLGTGQAAWAMDQIMTGTATPAQIAGFAVAMKLKRPTSAEVTELADVMLKHARRIPTDVIGNETVDIVGTGGDGANTVNLSTMAAIVVAAAGVPVMKHGNRAASSLSGGADTLEALGVRIDLGPEQVAASVAEVGIGFAFANQFHPSYKHASAVRRELGVPTVFNLLGP 194          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPL (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila (strain Lens) GN=trpD PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.139e-29
Identity = 66/175 (37.71%), Postives = 101/175 (57.71%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L + L+SR DL+  + Q  +   +  E  +  I+ FL L+R KGET  E+   A+ M + A K++     +DIVGTGGDG NT N+ST  S + AA G KVAK             D+LE  G +++L    V+ C+++  + F+ +  YHPAM+  R  R++L ++T+FN+LGP
Sbjct:    6 LFEQLLSRQDLSSDQMQEVIHACMTGEFSDVQIATFLALMRMKGETVNELTAAAKVMRQLAHKIDLGNPLIDIVGTGGDGRNTFNVSTACSFVVAAAGIKVAKHGNRSVSSRSGSADLLEQAGFILNLSDSQVQNCINQCQLAFLFAPHYHPAMQHARAARQQLGIRTLFNLLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LARHH (Anthranilate phosphoribosyltransferase OS=Laribacter hongkongensis (strain HLHK9) GN=trpD PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.139e-29
Identity = 78/181 (43.09%), Postives = 103/181 (56.91%), Query Frame = 2
Query:  176 FNELIDCL--ISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            F+E++D +  I R D+T A+                I+  L+ LR K E+  EI   A  M ++A  V        VD  GTGGDGA+T NIST A+ + AA GA+VAK             DVLEALGV + L  E V RC+DE G+GFM +  +H AMK+V PVR++L V+T+FNILGP
Sbjct:   19 FDEMLDIMRQIMRGDMTPAQ----------------IAGILIGLRVKVESVSEIAAAATVMREFATTVPVAERRHLVDTCGTGGDGAHTFNISTTAAFIVAAAGAQVAKHGGRSVSSSSGSADVLEALGVKLALSAENVGRCIDEIGLGFMFAPNHHTAMKYVAPVRRELGVRTIFNILGP 183          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SULSO (Anthranilate phosphoribosyltransferase OS=Sulfolobus solfataricus GN=trpD PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29
Identity = 78/177 (44.07%), Postives = 106/177 (59.89%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            NE++  LI++ DL   EA+     ++  E  E L+SA LV LR KGE+  EIVG ARAM + A K++ + +A+D  GTGGDG  TVN+ST ++IL +     VAK             DVLEALG  I + PE  +  V++    F+ +  YHPAMK V  VRK L ++T+FNILGP
Sbjct:    4 NEILKKLINKSDLEINEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKID-VPNAIDTAGTGGDGLGTVNVSTASAILLSLVNP-VAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKELVNKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGP 178          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_MARMS2.403e-2941.14Anthranilate phosphoribosyltransferase OS=Marinomo... [more]
TRPD_HALLT2.403e-2940.68Anthranilate phosphoribosyltransferase OS=Halorubr... [more]
TRPD_DECAR2.403e-2948.34Anthranilate phosphoribosyltransferase OS=Dechloro... [more]
TRPD_BURVG2.403e-2949.32Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_BURCM2.403e-2948.63Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_BURA42.403e-2948.63Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_MYCSJ3.139e-2941.85Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_LEGPL3.139e-2937.71Anthranilate phosphoribosyltransferase OS=Legionel... [more]
TRPD_LARHH3.139e-2943.09Anthranilate phosphoribosyltransferase OS=Laribact... [more]
TRPD_SULSO4.099e-2944.07Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
back to top