CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSL (Anthranilate phosphoribosyltransferase OS=Geobacter sulfurreducens GN=trpD PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.839e-30
Identity = 78/186 (41.94%), Postives = 107/186 (57.53%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV---EGLGDA------------VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++ R+DLTEAE    +D +++  A  A I+AF+  LR KGET  EI G AR M   A  +   +G+ D             +D+VGTGGDG NT NIST  S + A+CG KVAK             DVLE+LGV +D+ PE V + + + GIGF+ +   H AMK     RK++ ++T+FNILGP
Sbjct:    9 VVERIDLTEAEMIEVMDQIMSGGATPAQIAAFITALRMKGETVEEITGAARVMRDRATPIRVGKGVLDIDRDDINIDQETILDVVGTGGDGTNTFNISTTVSFVVASCGVKVAKHGNRAVSSACGSADVLESLGVNLDVTPETVEQAIAKIGIGFLFAPALHGAMKHAIGPRKEIGIRTIFNILGP 194          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_EUBE2 (Anthranilate phosphoribosyltransferase OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=trpD PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.839e-30
Identity = 75/176 (42.61%), Postives = 105/176 (59.66%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E I  L+ + DLT  +    ++ ++  EA +A  +AFL  L AKGET  EI   AR +  +  K     D ++IVGTGGDG+N++NIST ASI+ +A G  VAK             D LEALGV ID  P  + + + +  I F+ + KYHPAM+FV  VRK++ ++T+FNILGP
Sbjct:    4 EAIAKLVKKEDLTAGQMNDVMEEIMTGEATDAQKAAFLTALAAKGETIDEITAAARVLRAHCEKFLNDMDVLEIVGTGGDGSNSINISTLASIIVSAAGIPVAKHGNRAASSKCGTADCLEALGVKIDAAPARMAQILKDINICFLFAQKYHPAMRFVGGVRKEIGIRTLFNILGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CLOTH (Anthranilate phosphoribosyltransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=trpD PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.839e-30
Identity = 76/175 (43.43%), Postives = 104/175 (59.43%), Query Frame = 2
Query:  188 IDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV-EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            I  L+   +L+E+E   +LD ++  +A  A I +F+  LR KGET  EI G A+ M   A K+   +   +D  GTGGDG NT NIST  + +AAA G  VAK             DVLEALGV IDLDP  V+ C+++ GIGF+ +  +H +MK     RK+L ++T+FNILGP
Sbjct:    6 ISKLVEGKNLSESEIIEALDCIMEGKATPAQIGSFITALRIKGETIEEITGCAKVMRAKADKICPNVDYYIDTCGTGGDGTNTFNISTATAFVAAAGGVYVAKHGNRSVSSKSGSADVLEALGVNIDLDPVQVKECIEKVGIGFIYAPVFHKSMKHAAGPRKELGIRTIFNILGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BURP8 (Anthranilate phosphoribosyltransferase OS=Burkholderia phymatum (strain DSM 17167 / STM815) GN=trpD PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.839e-30
Identity = 72/146 (49.32%), Postives = 93/146 (63.70%), Query Frame = 2
Query:  275 LISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + +A +  LR K ET GEI   A  M ++A  V+   ++  VDIVGTGGDG++T NIST    ++AA GAKVAK             DVLEALGV IDL PE V   + E G+GFM +  +HPAMK + PVR++L V+T+FNILGP
Sbjct:   38 MAAAIITGLRVKKETIGEITAAATVMREFARHVDVQDNSNFVDIVGTGGDGSHTFNISTATMFVSAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPEQVAASITETGMGFMFAPNHHPAMKNIAPVRRELGVRTIFNILGP 183          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PSEA7 (Anthranilate phosphoribosyltransferase OS=Pseudomonas aeruginosa (strain PA7) GN=trpD PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.708e-30
Identity = 72/173 (41.62%), Postives = 104/173 (60.12%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +++++DLT  E QA +  ++     +A I AFL+ +R K ET  EIVG    M + A  V+   L   VD+VGTGGDGAN  N+S+ AS + AA G KVAK             D+LEA G+ ++L  E V RC+D  G+GFM +  +H AMK+    R++L ++T+FN+LGP
Sbjct:   10 IVNQLDLTTEEMQAVMRQIMTGRCTDAQIGAFLMGMRMKSETIDEIVGAVAVMRELADGVQLPTLKHVVDVVGTGGDGANIFNVSSAASFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGIYLELTSEQVARCIDTVGVGFMFAQVHHKAMKYAAGPRRELGLRTLFNMLGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_DESPS (Anthranilate phosphoribosyltransferase OS=Desulfotalea psychrophila GN=trpD PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.708e-30
Identity = 77/175 (44.00%), Postives = 106/175 (60.57%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGD---AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +++  DL+E+E  AS++ +++ +A  A I++F+  LR KGE   EIVG  R M   A  ++ GLG     +DIVGTGGDGA+T N+ST  S + AA G  VAK             DVLEALGV + LDP  V R V E GIGF+ +   H AMK     R+++ ++T+FNILGP
Sbjct:   19 VVTGADLSESEMMASMEEVMSGQASPAQIASFITALRMKGEAVEEIVGAVRVMRDKATFIDCGLGPDDILMDIVGTGGDGADTFNVSTTTSFVVAAAGVAVAKHGNRAVSSRCGSADVLEALGVDLSLDPATVARSVQEIGIGFLFAPLLHAAMKHAIVPRREMGIRTIFNILGP 193          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CLOPH (Anthranilate phosphoribosyltransferase OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=trpD PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.708e-30
Identity = 76/176 (43.18%), Postives = 104/176 (59.09%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E I  L+++ DL+   A+  +D +++ EA   LI ++L  LR KGET  EI   A  M K+  ++    D ++IVGTGGD ANT NIST    + +A G  VAK             DVLEALGV I L P    + ++E G+ FM +  YH AMKFV PVR++L ++T+FNILGP
Sbjct:    4 EAIYQLVNKEDLSYEVAEQVMDEIMSGEASNVLIGSYLTALRMKGETIDEITASAAGMRKHCVRLLHNMDVLEIVGTGGDEANTFNISTTTGFVVSAAGIPVAKHGNRCVSSKCGAADVLEALGVNIMLAPLESAKILEEMGLCFMFAQTYHSAMKFVAPVRRELGIRTIFNILGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CHLT3 (Anthranilate phosphoribosyltransferase OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=trpD PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.708e-30
Identity = 71/143 (49.65%), Postives = 90/143 (62.94%), Query Frame = 2
Query:  278 ISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            I+AFLVLLR +GE   EI G ARA++ +A +    GD +D  GTGGDGANT NIST AS++A ACG KVAK             DVLEA+G  IDL  +       E G  F+ +  +H AMK V PVRK+L ++T+FN+LGP
Sbjct:   38 IAAFLVLLRQRGEEVEEIYGAARAILNHAEQPILEGDPIDTCGTGGDGANTFNISTAASLIAHACGVKVAKHGNRSISSRCGSADVLEAMGFKIDLPKKETEELFKETGFVFLFAPIFHKAMKNVAPVRKELGLRTIFNMLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_ALKMQ (Anthranilate phosphoribosyltransferase OS=Alkaliphilus metalliredigens (strain QYMF) GN=trpD PE=3 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 3.708e-30
Identity = 76/177 (42.94%), Postives = 100/177 (56.50%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + ID +I R DL E E  A +  ++  +  ++ I  FL  LR KGET  EI   A+ M   A  VE     ++D  GTGGD ANT NIST  + +AAA G  V K             DVLE LGV IDL P+ V  CV++  +GFM + K+H AMK+    R++L V+T+FNILGP
Sbjct:    4 QAIDKVIRRQDLAETEMMAVMQGIMEGKVTDSQIGGFLTALRMKGETVEEITASAKVMRSKALVVEVNQPHSIDTCGTGGDQANTFNISTAVAFVAAAAGVTVVKHGNRSVSSQCGSADVLEKLGVNIDLTPKQVETCVEQVNMGFMFAPKFHQAMKYAAAARRELGVRTIFNILGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_AGRT5 (Anthranilate phosphoribosyltransferase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=trpD PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.708e-30
Identity = 72/165 (43.64%), Postives = 97/165 (58.79%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L   +A+ + D L++ EA  + I  FL+ LR +GET  EIVG   +M      V    +A+DIVGTGGDG  T NIST ASI+ A  G  VAK             D L ALGV +D+ P+ + RC+ EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP
Sbjct:   17 LNREDARTAFDILMSGEATPSQIGGFLMALRVRGETVDEIVGAVSSMRARMLPVSAPANAIDIVGTGGDGIGTYNISTLASIITAGTGLPVAKHGNRALSSKSGTADALSALGVRLDIGPDLIARCIAEAGLGFMFAQMHHSAMRHVGPSRVELGTRTIFNLLGP 181          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_GEOSL2.839e-3041.94Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_EUBE22.839e-3042.61Anthranilate phosphoribosyltransferase OS=Eubacter... [more]
TRPD_CLOTH2.839e-3043.43Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_BURP82.839e-3049.32Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_PSEA73.708e-3041.62Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_DESPS3.708e-3044.00Anthranilate phosphoribosyltransferase OS=Desulfot... [more]
TRPD_CLOPH3.708e-3043.18Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_CHLT33.708e-3049.65Anthranilate phosphoribosyltransferase OS=Chlorohe... [more]
TRPD_ALKMQ3.708e-3042.94Anthranilate phosphoribosyltransferase OS=Alkaliph... [more]
TRPD_AGRT53.708e-3043.64Anthranilate phosphoribosyltransferase OS=Agrobact... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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