CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_VIBVU (Anthranilate phosphoribosyltransferase OS=Vibrio vulnificus GN=trpD PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.842e-30
Identity = 72/176 (40.91%), Postives = 103/176 (58.52%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +I+ L  +  LTE E+Q   D ++  E D  L+++ L  L+ KGET  EI G A+A++  A        D  DIVGTGGDG NT+NIST A+ +AAACG KVAK             D+L++ G+ + +  E  R  VD  G+ F+ + +YH  +K   PVR+ +K +T+FNILGP
Sbjct:    4 IINKLYQQASLTEQESQQLFDTIIRGELDPILMASALTALKIKGETPDEIAGAAKALLANAQPFPRPDYDFADIVGTGGDGHNTINISTTAAFVAAACGLKVAKHGNRSVSSKSGSSDLLDSFGINLAMSAEDTRSAVDNIGVAFLFAPQYHSGVKHAMPVRQTMKTRTIFNILGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_THERP (Anthranilate phosphoribosyltransferase OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=trpD PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.842e-30
Identity = 74/169 (43.79%), Postives = 101/169 (59.76%), Query Frame = 2
Query:  209 VDLTEA-EAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEG--LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +D+ EA EA +++  +  EA  A I+A +  LR +GE   EI G  + +  +   VE       +D+VGTGGDG  T NIST  + + A  G  VAK             DVLEALGV IDL+P  V RCV+EAGIGFM + ++HPA++   PVR++L  +TVFN+LGP
Sbjct:   15 LDIDEAMEAMSAI--MTGEATPAQIAALVTALRMRGERETEIAGFVKGLRAHMIPVELQLAQPVIDVVGTGGDGNRTFNISTATAFVVAGAGVPVAKHGNRAMSSRAGSADVLEALGVRIDLNPSAVARCVEEAGIGFMFAQRFHPALRHAAPVRRELGFRTVFNVLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_RHIME (Anthranilate phosphoribosyltransferase OS=Rhizobium meliloti GN=trpD PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.842e-30
Identity = 71/169 (42.01%), Postives = 100/169 (59.17%), Query Frame = 2
Query:  203 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +R  L+  +A+A+ + +++  A  + I  FL+ LR +GET  EIVG   AM      VE    A+DIVGTGGDGA T NIST A+++ A  G  VAK             D L  LGV +D+ P  + RC+ EAG+GFM + ++H AM+ V P R +L  +T+FN+LGP
Sbjct:   13 AREALSREDARAAFEIIMSGAATPSQIGGFLMALRVRGETVDEIVGAVGAMRARMLPVEAPDGAIDIVGTGGDGAGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGTADALSCLGVNLDIGPAVISRCIAEAGLGFMFAQQHHSAMRHVGPTRVELGTRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_TOLAT (Anthranilate phosphoribosyltransferase OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=trpD PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.324e-30
Identity = 73/165 (44.24%), Postives = 98/165 (59.39%), Query Frame = 2
Query:  218 TEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +E   Q   + L  E D  ++S+ L  ++ KGE+  EI G ARA+I  AAK     D    DIVGTGGDG  T+NIS+ A+I+ A CG KVAK             D+LE LG+ +D+ PE  R C+DEA I F+ +  YH  M+F  PVR+ LK +T+FN+LGP
Sbjct:   16 SEQTEQLFGELLRGEMDPIVLSSLLTAMKVKGESPSEIEGAARALIA-AAKPFPRPDYEFCDIVGTGGDGLYTINISSTAAIVGATCGIKVAKHGNRSVSSKTGSSDLLEKLGIKLDMSPETARHCLDEANICFLFAPHYHSGMRFAAPVRQALKTRTIFNVLGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PSEMY (Anthranilate phosphoribosyltransferase OS=Pseudomonas mendocina (strain ymp) GN=trpD PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 6.324e-30
Identity = 76/179 (42.46%), Postives = 107/179 (59.78%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA---VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E ++ +++++DLT  E QA + + +  +  +A I AFL+ +R K ET  EIVG A  M + AA V  + DA   VD  GTGGDG N  N+ST A+ + AA G KVAK             D+LEA GV + L PE V RCV+  G+GFM +  +H AMK     R++L ++T+FN+LGP
Sbjct:    5 EALNRIVAQLDLTTEEMQAVMREIMTGQCTDAQIGAFLMGMRMKSETIDEIVGAASVMRELAAPV--VIDAERLVDTCGTGGDGMNIFNVSTAAAFVVAAAGGKVAKHGNRAVSGKSGSADLLEAAGVYLGLKPEQVARCVESVGVGFMFAPSHHGAMKHAIGPRRELGLRTIFNMLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_VIBCH (Anthranilate phosphoribosyltransferase OS=Vibrio cholerae GN=trpD PE=3 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 8.260e-30
Identity = 70/176 (39.77%), Postives = 106/176 (60.23%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +I+ L  +  LT+AE+Q   D ++  E D  L++A L  L+ KGET  EI G A+A++  A        D  DIVGTGGDG+NT+NIST A+ +AAACG KVAK             D+L + G+ + +  +  R+ +D+ G+ F+ + +YH  ++   PVR+ +K +T+FNILGP
Sbjct:    4 IINKLYEQQGLTQAESQQLFDQIIRGEMDPVLMAAVLTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGSNTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDLLSSFGINLAMSAQDSRQALDDLGVAFLFAPQYHGGVRHAMPVRQTMKTRTIFNILGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_VIBC3 (Anthranilate phosphoribosyltransferase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=trpD PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.260e-30
Identity = 70/176 (39.77%), Postives = 106/176 (60.23%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +I+ L  +  LT+AE+Q   D ++  E D  L++A L  L+ KGET  EI G A+A++  A        D  DIVGTGGDG+NT+NIST A+ +AAACG KVAK             D+L + G+ + +  +  R+ +D+ G+ F+ + +YH  ++   PVR+ +K +T+FNILGP
Sbjct:    4 IINKLYEQQGLTQAESQQLFDQIIRGEMDPVLMAAVLTALKIKGETPDEIAGAAKALLANANPFPRPDYDFADIVGTGGDGSNTINISTTAAFVAAACGVKVAKHGNRGVSSKSGSSDLLSSFGINLAMSAQDSRQALDDLGVAFLFAPQYHGGVRHAMPVRQTMKTRTIFNILGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SINMW (Anthranilate phosphoribosyltransferase OS=Sinorhizobium medicae (strain WSM419) GN=trpD PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.260e-30
Identity = 69/169 (40.83%), Postives = 101/169 (59.76%), Query Frame = 2
Query:  203 SRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +R  L+  +A+A+ + +++  A  + I  FL+ LR +GET  EIVG   AM      V+    ++DIVGTGGDGA T NIST A+++ A  G  VAK             D L  LGV +++ PE + RC+ EAG+GFM + ++H AM+ V P R +L  +T+FN+LGP
Sbjct:   13 AREALSRDDARAAFEIIMSGAATPSQIGGFLMALRVRGETVDEIVGAVGAMRARMLHVKAPDGSIDIVGTGGDGAGTYNISTLAALIVAGAGVPVAKHGNRALSSKSGTADALSCLGVNLEIGPEAISRCIGEAGLGFMFAQQHHSAMRHVGPTRVELGTRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_MYCS2 (Anthranilate phosphoribosyltransferase OS=Mycobacterium smegmatis GN=trpD PE=1 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.260e-30
Identity = 79/183 (43.17%), Postives = 107/183 (58.47%), Query Frame = 2
Query:  170 PCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV--EGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            P +  ++  L +  +L    A  ++D ++   A  A IS F V ++ K  T  E+  LA  M+ +A +V  + +G D VDIVGTGGDGANTVN+ST ASI+ AACG  V K             D LEALGV IDL P+ V R V E GIGF  + ++HP+ K    VR+++ V TVFN+LGP
Sbjct:   19 PSWPRILGRLTTGQNLPNGHAAWAMDQIMTGAATPAQISGFAVSMKMKRPTASEVRELADIMLTHARRVPTDEIGTDTVDIVGTGGDGANTVNLSTMASIVVAACGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDDVARSVREVGIGFAFAPQFHPSYKHASIVRREIGVPTVFNLLGP 201          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_DELAS (Anthranilate phosphoribosyltransferase OS=Delftia acidovorans (strain DSM 14801 / SPH-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 8.260e-30
Identity = 73/151 (48.34%), Postives = 91/151 (60.26%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E    + +A +  LR K ET GEI   A  M +++ KV  E     VDIVGTGGDGANT NIST +  + AA G KV+K             D +EALGV I L PE + R + + GIGFM +  +HPAMK V PVRK+L V+T+FNILGP
Sbjct:   35 ELSPVMTAAIVTGLRVKKETIGEITAAAEVMREFSNKVHVEDKRHLVDIVGTGGDGANTFNISTCSIFVIAAAGGKVSKHGGRSVSSKSGSADAMEALGVNIQLTPEQIARSIADVGIGFMFAPNHHPAMKNVAPVRKELGVRTIFNILGP 185          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_VIBVU4.842e-3040.91Anthranilate phosphoribosyltransferase OS=Vibrio v... [more]
TRPD_THERP4.842e-3043.79Anthranilate phosphoribosyltransferase OS=Thermomi... [more]
TRPD_RHIME4.842e-3042.01Anthranilate phosphoribosyltransferase OS=Rhizobiu... [more]
TRPD_TOLAT6.324e-3044.24Anthranilate phosphoribosyltransferase OS=Tolumona... [more]
TRPD_PSEMY6.324e-3042.46Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_VIBCH8.260e-3039.77Anthranilate phosphoribosyltransferase OS=Vibrio c... [more]
TRPD_VIBC38.260e-3039.77Anthranilate phosphoribosyltransferase OS=Vibrio c... [more]
TRPD_SINMW8.260e-3040.83Anthranilate phosphoribosyltransferase OS=Sinorhiz... [more]
TRPD_MYCS28.260e-3043.17Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_DELAS8.260e-3048.34Anthranilate phosphoribosyltransferase OS=Delftia ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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