CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PSYIN (Anthranilate phosphoribosyltransferase OS=Psychromonas ingrahamii (strain 37) GN=trpD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29
Identity = 67/178 (37.64%), Postives = 104/178 (58.43%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +E+++ L +   LT  ++QA  + ++  + D  ++S+ L  L+ KGET  EI G A A++  A        D  DIVGTGGDG  T+NIST ++ +AAACG KV K             D+L A G+ +D+  +  R+C+D+  I F+ + +YH  M+F  PVR  LK +++FN+LGP
Sbjct:    7 HEILEQLYAAKSLTSEQSQAFFERVVQGQVDPIILSSVLTALKIKGETAQEITGAANALLAQATPFPRPDYDFTDIVGTGGDGLGTINISTASAFVAAACGLKVCKHGSRSVSSKSGSSDLLAAFGLNLDMSAQQARQCLDDLNICFLFAPQYHAGMRFAAPVRAALKTRSIFNVLGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PSESM (Anthranilate phosphoribosyltransferase OS=Pseudomonas syringae pv. tomato GN=trpD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29
Identity = 72/173 (41.62%), Postives = 103/173 (59.54%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +++++DL+  E +  + + +  +  EA I AFL+ +R K ET  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST ++ + +A G  VAK             D+LEA GV ++L P  V RC+D  GIGFM +  +H AMK     R++L ++T+FN+LGP
Sbjct:   10 VVNQLDLSTDEMRDVMREIMTGQCTEAQIGAFLMGMRMKSETIDEIVGAVSVMRELADKVELKTLDGVVDIVGTGGDGANIFNVSTASAFVISAAGCTVAKHGNRAVSGKSGSADLLEAAGVYLNLTPVQVARCIDSVGIGFMFAQSHHSAMKHTAGPRRELGLRTLFNMLGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPW (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain W619) GN=trpD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29
Identity = 72/173 (41.62%), Postives = 100/173 (57.80%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++  +DL+  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H AMK     R+ L ++T+FN+LGP
Sbjct:   10 IVGHLDLSTEEMRDVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASSFVLAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVGRCIDSLGIGFMFAQSHHSAMKHAAGPRRDLGLRTLFNMLGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPG (Anthranilate phosphoribosyltransferase OS=Pseudomonas putida (strain GB-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29
Identity = 71/173 (41.04%), Postives = 101/173 (58.38%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++  +DL+  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST ++ + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H AMK     R++L ++T+FN+LGP
Sbjct:   10 IVGHLDLSTEEMRDVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASAFVLAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPTQVARCIDSLGIGFMFAQSHHSAMKHAAGPRRELGLRTLFNMLGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_MYCSS (Anthranilate phosphoribosyltransferase OS=Mycobacterium sp. (strain MCS) GN=trpD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29
Identity = 77/184 (41.85%), Postives = 108/184 (58.70%), Query Frame = 2
Query:  167 TPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV--EGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            TP +  ++  L +  +L   +A  ++D ++   A  A I+ F V ++ K  T  E+  LA  M+K+A ++  + +G + VDIVGTGGDGANTVN+ST A+I+ AA G  V K             D LEALGV IDL PE V   V E GIGF  + ++HP+ K    VR++L V TVFN+LGP
Sbjct:   11 TPTWPSILGRLTTGQNLGTGQAAWAMDQIMTGTATPAQIAGFAVAMKLKRPTSAEVTELADVMLKHARRIPTDIIGNETVDIVGTGGDGANTVNLSTMAAIVVAAAGVPVMKHGNRAASSLSGGADTLEALGVRIDLGPEQVAASVAEVGIGFAFANQFHPSYKHASAVRRELGVPTVFNLLGP 194          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_MYCSK (Anthranilate phosphoribosyltransferase OS=Mycobacterium sp. (strain KMS) GN=trpD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29
Identity = 77/184 (41.85%), Postives = 108/184 (58.70%), Query Frame = 2
Query:  167 TPCFNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV--EGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            TP +  ++  L +  +L   +A  ++D ++   A  A I+ F V ++ K  T  E+  LA  M+K+A ++  + +G + VDIVGTGGDGANTVN+ST A+I+ AA G  V K             D LEALGV IDL PE V   V E GIGF  + ++HP+ K    VR++L V TVFN+LGP
Sbjct:   11 TPTWPSILGRLTTGQNLGTGQAAWAMDQIMTGTATPAQIAGFAVAMKLKRPTSAEVTELADVMLKHARRIPTDIIGNETVDIVGTGGDGANTVNLSTMAAIVVAAAGVPVMKHGNRAASSLSGGADTLEALGVRIDLGPEQVAASVAEVGIGFAFANQFHPSYKHASAVRRELGVPTVFNLLGP 194          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_METEP (Anthranilate phosphoribosyltransferase OS=Methylobacterium extorquens (strain PA1) GN=trpD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29
Identity = 76/178 (42.70%), Postives = 100/178 (56.18%), Query Frame = 2
Query:  176 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            F   +  + S   L+  +A+A+ D LL+ E       AFL  L  +GE+  EIVG   AM      V     A+DIVGTGGD + + N+ST A+IL AACG  VAK             DVL ALGV I L PE + RC+ EAG+ FM +  +H AM+ V PVR +L  +T+FN+LGP
Sbjct:    4 FKTHLAIVASGAPLSREQARAAFDDLLSGEVTPIQAGAFLTALSVRGESEDEIVGAVSAMRARMLPVAAPEGAIDIVGTGGDHSGSYNVSTLAAILTAACGVPVAKHGNRAATSRSGAADVLAALGVKIGLPPEALARCLSEAGLCFMFAQTHHGAMRHVAPVRTELPFRTIFNMLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_METC4 (Anthranilate phosphoribosyltransferase OS=Methylobacterium chloromethanicum (strain CM4 / NCIMB 13688) GN=trpD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29
Identity = 76/178 (42.70%), Postives = 100/178 (56.18%), Query Frame = 2
Query:  176 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            F   +  + S   L+  +A+A+ D LL+ E       AFL  L  +GE+  EIVG   AM      V     A+DIVGTGGD + + N+ST A+IL AACG  VAK             DVL ALGV I L PE + RC+ EAG+ FM +  +H AM+ V PVR +L  +T+FN+LGP
Sbjct:    4 FKTHLAIVASGAPLSREQARAAFDDLLSGEVTPIQAGAFLTALSVRGESEDEIVGAVSAMRARMLPVAAPEGAIDIVGTGGDHSGSYNVSTLAAILTAACGVPVAKHGNRAATSRSGAADVLAALGVKIGLPPEALARCLSEAGLCFMFAQTHHGAMRHVAPVRTELPFRTIFNMLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPH (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513) GN=trpD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29
Identity = 66/175 (37.71%), Postives = 101/175 (57.71%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L + L+SR DL+  + Q  +   +  E  +  I+ FL L+R KGET  E+   A+ M + A K++     +DIVGTGGDG NT N+ST  S + AA G KVAK             D+LE  G +++L    V+ C+++  + F+ +  YHPAM+  R  R++L ++T+FN+LGP
Sbjct:    6 LFEQLLSRQDLSSDQMQEVIHACMTGEFSDVQIATFLALMRMKGETVNELTAAAQVMRQLAHKIDLGNPLIDIVGTGGDGRNTFNVSTACSFVVAAAGIKVAKHGNRSVSSRSGSADLLEQAGFILNLSDSQVQNCINQCQLAFLFAPHYHPAMQHARAARQQLGIRTLFNLLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPA (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila (strain Paris) GN=trpD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29
Identity = 66/175 (37.71%), Postives = 101/175 (57.71%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L + L+SR DL+  + Q  +   +  E  +  I+ FL L+R KGET  E+   A+ M + A K++     +DIVGTGGDG NT N+ST  S + AA G KVAK             D+LE  G +++L    V+ C+++  + F+ +  YHPAM+  R  R++L ++T+FN+LGP
Sbjct:    6 LFEQLLSRQDLSSDQMQEVIHACMTGEFSDVQIATFLALMRMKGETVNELTAAAQVMRQLAHKIDLGNPLIDIVGTGGDGRNTFNVSTACSFVVAAAGIKVAKHGNRSVSSRSGSADLLEQAGFILNLSDSQVQNCINQCQLAFLFAPHYHPAMQHARAARQQLGIRTLFNLLGP 180          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_PSYIN4.099e-2937.64Anthranilate phosphoribosyltransferase OS=Psychrom... [more]
TRPD_PSESM4.099e-2941.62Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEPW4.099e-2941.62Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_PSEPG4.099e-2941.04Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_MYCSS4.099e-2941.85Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_MYCSK4.099e-2941.85Anthranilate phosphoribosyltransferase OS=Mycobact... [more]
TRPD_METEP4.099e-2942.70Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_METC44.099e-2942.70Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_LEGPH4.099e-2937.71Anthranilate phosphoribosyltransferase OS=Legionel... [more]
TRPD_LEGPA4.099e-2937.71Anthranilate phosphoribosyltransferase OS=Legionel... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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