CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BURM1 (Anthranilate phosphoribosyltransferase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=trpD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29
Identity = 71/146 (48.63%), Postives = 92/146 (63.01%), Query Frame = 2
Query:  275 LISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + +A +  LR K ET GEI   A  M ++A  VE   ++  VDIVGTGGDG++T NIST +  + AA GAKVAK             DVLEALGV IDL P+ V   + E G+GFM +  +HPAMK +  VR++L V+T+FNILGP
Sbjct:   39 MAAAIITGLRVKKETIGEIAAAATVMREFANHVEVQDNSNFVDIVGTGGDGSHTFNISTASMFVTAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQPDQVAASIAETGMGFMFAPNHHPAMKNIAAVRRELGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BACP2 (Anthranilate phosphoribosyltransferase OS=Bacillus pumilus (strain SAFR-032) GN=trpD PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.099e-29
Identity = 75/177 (42.37%), Postives = 102/177 (57.63%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEA-QASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N+ +  L++   L+E EA Q   D +     +A ++A L +L  +GET  E+ G  RAM + A   E   D VD  GTGGDG +T NIST A+I+A+A GAK+AK             DVLE LG+ I   PE  RR + E  +GF+ +  YH +MK V  VRK+L  +TVFN+LGP
Sbjct:    2 NQRLSALVNGGFLSENEAHQLMHDMMSGSLTDAEVAASLSILAHRGETAEEMTGFVRAMRQKAEPAERSLDVVDTCGTGGDGLSTFNISTAAAIVASAAGAKIAKHGNRSVSSKSGSADVLECLGIHIQSTPEETRRQIQEKNMGFLFAPMYHSSMKQVAAVRKQLGFRTVFNLLGP 178          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_RHOBA (Anthranilate phosphoribosyltransferase OS=Rhodopirellula baltica GN=trpD PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.354e-29
Identity = 73/167 (43.71%), Postives = 100/167 (59.88%), Query Frame = 2
Query:  212 DLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAV-DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            DL+  +  A +D +L   A+E  +   L+ LR KGE   E+VG ARAM K+  +++   D + D  GTGG G+ T NIST  +ILA+ACG  VAK             DVLE LGV I+ +P+ V R +++ GI F  + K HPAM+ V  VR+KL V T+FN+LGP
Sbjct:   24 DLSAEQTGALIDAMLQGAANEEEVGQLLLALREKGEAVSELVGAARAMRKHMTRIDHEHDVLLDTCGTGGSGSGTFNISTAVAILASACGVAVAKHGNRRATSKTGSADVLECLGVKIESEPDQVSRRLNDIGICFCFAAKLHPAMRHVVSVRRKLAVPTLFNLLGP 190          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_METPB (Anthranilate phosphoribosyltransferase OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.354e-29
Identity = 76/178 (42.70%), Postives = 100/178 (56.18%), Query Frame = 2
Query:  176 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            F   +  + S   L+  +A+A+ D LL+ E       AFL  L  +GE+  EIVG   AM      V     A+DIVGTGGD + + N+ST A+IL AACG  VAK             DVL ALGV I L PE + RC+ EAG+ FM +  +H AM+ V PVR +L  +T+FN+LGP
Sbjct:    4 FKTHLATVASGAALSREQARAAFDDLLSGEVTPIQAGAFLTALSVRGESEDEIVGAVSAMRARMLPVTAPTGAIDIVGTGGDHSGSYNVSTLAAILTAACGVSVAKHGNRAATSRSGAADVLVALGVKIGLPPEALARCLSEAGLCFMFAQTHHGAMRHVAPVRTELPFRTIFNMLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_METFK (Anthranilate phosphoribosyltransferase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.354e-29
Identity = 75/173 (43.35%), Postives = 99/173 (57.23%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLNEADEAL-ISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            LI   D T  E    +  ++  A   + I+ FL  LR KGET  EI   A+ M   ++KVE    +  VD  GTGG      N+ST ++ +AA  GA++AK             DVLEALGV I L PE V RCV+EAGIGFM +  +H AMK+  PVR++L V+T+FN+LGP
Sbjct:   12 LIDHTDFTHEEMLDVMQQIMGGAFTTVQIAGFLAGLRVKGETVTEIAAAAQVMRALSSKVEVEDSSYLVDTCGTGGAPTKAFNVSTASAFVAAGAGARIAKHGGRAASSKSGSADVLEALGVNIGLTPEQVARCVNEAGIGFMFAPNHHAAMKYAAPVRRELGVRTMFNLLGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LEIXX (Anthranilate phosphoribosyltransferase OS=Leifsonia xyli subsp. xyli GN=trpD PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.354e-29
Identity = 77/182 (42.31%), Postives = 104/182 (57.14%), Query Frame = 2
Query:  164 QTPCFNELIDCLISRVDLTEAEAQ-ASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +T  ++ ++  L++R DL+ A+A  A    +  EA +A I+AFL+ LRAKGET  EIVG   A++ +A  +     A+DIVGTGGD   TVNIST A+I+AA  G  V K             DVL ALG+ + L PE V   +   GI F  ++ +HP       VR +L V TVFNILGP
Sbjct:    3 ETQSWSSVLIALLAREDLSVADASWAMRQVMTGEATDAQIAAFLIALRAKGETVDEIVGFRDAVLDHAVGLPVNSMALDIVGTGGDRFGTVNISTTAAIVAAGAGVPVIKHGNRAASSSSGSSDVLAALGIDLTLPPERVAEVLRATGITFAFASAFHPGFANAAAVRSQLGVPTVFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_DESOH (Anthranilate phosphoribosyltransferase OS=Desulfococcus oleovorans (strain DSM 6200 / Hxd3) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.354e-29
Identity = 73/179 (40.78%), Postives = 100/179 (55.87%), Query Frame = 2
Query:  176 FNELIDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAV-DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            F++ +  +I+R DL+  E      D       +A I AF+  L  KGETF E+ G A AM + A +++     V D  GTGGDGA+T NIST ++ + A  G  VAK             DVLEALGV +D  PE     V+E GIGF+ +  +H AMK+    RK+L V+T+FN+LGP
Sbjct:    2 FSQTLSKIINRKDLSREEMDRIFSDIFSGNLTDAQIGAFMAALATKGETFEELAGAAEAMRRKATRIQAASPVVVDTCGTGGDGAHTFNISTTSAFVVAGAGICVAKHGNRSVSSKCGSADVLEALGVKLDTQPEVAEEAVNEIGIGFLFAPLFHGAMKYAIVPRKELGVRTIFNMLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_AZOVD (Anthranilate phosphoribosyltransferase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 5.354e-29
Identity = 72/169 (42.60%), Postives = 100/169 (59.17%), Query Frame = 2
Query:  206 RVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            R+DL  AE Q  +  ++  +  +A I AFL+ +R K E+  EIVG A  M + AA V  G+   VD  GTGGDG N  N+ST A+ + AA G +VAK             D+LEA GV ++L PE V RCV+  G+GFM +  +H AMK     R++L ++T+FN+LGP
Sbjct:   13 RLDLNTAEMQGVMRQIMTGQCSDAQIGAFLMGMRMKSESIDEIVGAALVMRELAAPVTIGVERLVDTCGTGGDGMNIFNVSTAAAFVVAAAGGRVAKHGNRAVSGKSGSADLLEAAGVYLELSPEQVARCVESVGVGFMFAPAHHGAMKHAIGPRRELGLRTLFNMLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SYNJB (Anthranilate phosphoribosyltransferase OS=Synechococcus sp. GN=trpD PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.992e-29
Identity = 72/177 (40.68%), Postives = 105/177 (59.32%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLD-YLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYA-AKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +L+  L+ R  L+EA+A+  ++ +L N+  + +  A L  L+AKG + GE+ G+AR + + +      L   VD  GTGGDGA T NIST  + + +A G  V K             DVLEALGV +  +PE VR  V E GI F+ + ++HPAM+ V P R+ LKV+T+FN+LGP
Sbjct:   10 QLLGQLLDRQSLSEAQAEQLMNGWLQNQVPDVVSGAILAALQAKGVSAGELAGMARVLQRASLGSPLDLSLLVDTCGTGGDGAGTFNISTAVAFVVSAAGIPVVKHGNRSASGKVGSADVLEALGVNLGAEPERVRAAVAEVGITFLFAPQWHPAMRAVIPYRRALKVRTIFNLLGP 186          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SULIA (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain M.16.27) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.992e-29
Identity = 78/177 (44.07%), Postives = 105/177 (59.32%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N+++  LI++ DL   EA+     ++  E  E L+SA LV LR KGE+  EIVG ARAM + A K++ + +A+D  GTGGDG  TVN+ST ++IL +     VAK             DVLEALG  I + PE  +  V +    F+ S  YHPAMK V  VRK L ++T+FNILGP
Sbjct:    4 NDILKKLINKSDLEIDEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKID-VPNAIDTAGTGGDGLGTVNVSTASAILLSLINP-VAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKELVHKTNFVFLFSQYYHPAMKNVANVRKTLGIRTIFNILGP 178          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_BURM14.099e-2948.63Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_BACP24.099e-2942.37Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_RHOBA5.354e-2943.71Anthranilate phosphoribosyltransferase OS=Rhodopir... [more]
TRPD_METPB5.354e-2942.70Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_METFK5.354e-2943.35Anthranilate phosphoribosyltransferase OS=Methylob... [more]
TRPD_LEIXX5.354e-2942.31Anthranilate phosphoribosyltransferase OS=Leifsoni... [more]
TRPD_DESOH5.354e-2940.78Anthranilate phosphoribosyltransferase OS=Desulfoc... [more]
TRPD_AZOVD5.354e-2942.60Anthranilate phosphoribosyltransferase OS=Azotobac... [more]
TRPD_SYNJB6.992e-2940.68Anthranilate phosphoribosyltransferase OS=Synechoc... [more]
TRPD_SULIA6.992e-2944.07Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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