CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_STRMK (Anthranilate phosphoribosyltransferase OS=Stenotrophomonas maltophilia (strain K279a) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.992e-29
Identity = 70/146 (47.95%), Postives = 90/146 (61.64%), Query Frame = 2
Query:  275 LISAFLVLLRAKGETFGEIVGLARAMIKYA--AKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + +A L  LR K ET  EI   A  M ++A    V    + VDIVGTGGDG++T NIST A  +AAA GA+VAK             D LEALG VI+L P+ V   +D  GIGFM +  +HP+MK V PVR+++ V+T+FNILGP
Sbjct:   39 MTAAILTGLRVKKETVDEIAAAATVMREFARPVPVADTSNLVDIVGTGGDGSHTFNISTCAMFVAAAAGARVAKHGNRSVSSKSGSADALEALGAVIELQPDQVAAAIDRTGIGFMFAPIHHPSMKVVAPVRREMGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PSEPF (Anthranilate phosphoribosyltransferase OS=Pseudomonas fluorescens (strain Pf0-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.992e-29
Identity = 69/173 (39.88%), Postives = 101/173 (58.38%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++  +DL+  E +  + + +  +  +A I AF++ +R K E+  EIVG    M + A KVE   L   VD+VGTGGDGAN  N+ST +S + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H AMK+    R+ L ++T+FN+LGP
Sbjct:   10 IVDHLDLSTDEMRDVMREIMTGQCTDAQIGAFMMAMRMKSESIDEIVGAVSVMRELADKVELKTLDRVVDVVGTGGDGANIFNVSTASSFVVAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDNVGIGFMFAQTHHKAMKYAAGPRRDLGLRTLFNMLGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LEUMM (Anthranilate phosphoribosyltransferase OS=Leuconostoc mesenteroides subsp. mesenteroides (strain ATCC 8293 / NCDO 523) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.992e-29
Identity = 74/176 (42.05%), Postives = 103/176 (58.52%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E +  L+ + +LT+  AQ  ++ +++ +  +  I+A+L+ L AK E   EIVG ARAMI +A  +    +A+DIVGTGGD + T NIST AS + A  G  V K             D LEALGV IDL PE     +  AG  F+ +  +HPAMK+V  +RK L  +T+FNILGP
Sbjct:    6 EALKTLLVQKNLTDDMAQKVMNDIMDGKVSDPEIAAYLMGLAAKKEAVSEIVGSARAMIDHAKTIPSEFEAMDIVGTGGDLSGTFNISTTASFIVAGAGVPVVKHGNRAASSKSGTADALEALGVTIDLTPEQATDVLANAGQTFLFARSFHPAMKYVGSIRKSLGFRTIFNILGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_GEOLS (Anthranilate phosphoribosyltransferase OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.992e-29
Identity = 74/181 (40.88%), Postives = 100/181 (55.25%), Query Frame = 2
Query:  212 DLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDI---------------VGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            DL+E E    ++ +++ E   A I +F+  LR KGET  EI G AR M + A  +    + +DI               VGTGGDG NT NIST  S + +ACG KVAK             DVLE LGV +D+ PE V RC++E GIGF+ +   H AMK     R+++ ++T+FNILGP
Sbjct:   14 DLSEGEMIEVMNQIMSGECTPAQIGSFITALRMKGETIAEISGAARVMRERATPIRVGRNVLDIDRDDINLDQETILDVVGTGGDGTNTFNISTTVSFIVSACGVKVAKHGNRSVSSACGSADVLEKLGVNLDVTPEQVERCINEIGIGFLFAPALHGAMKHAIGPRREIGIRTIFNILGP 194          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD2_STRCO (Anthranilate phosphoribosyltransferase 2 OS=Streptomyces coelicolor GN=trpD2 PE=3 SV=1)

HSP 1 Score: 127.487 bits (319), Expect = 6.992e-29
Identity = 72/166 (43.37%), Postives = 98/166 (59.04%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            LTEAEA  ++  ++  EA  A I+AF + +  +G +   + G+ARA  ++A  V   G D +D  GTGGDG NT NIST A+I+AAACG +VAK             DVLE LGV IDL  E    C+D  GI F+ +  +HPA +     R++L  +TVFN+LGP
Sbjct:    5 LTEAEAADAMRVIMRGEATAAQIAAFALAVTVRGASADNLAGMARAAQEFATPVPRAGGDLLDTCGTGGDGLNTFNISTAAAIVAAACGVRVAKHGNRSASSACGSADVLEELGVRIDLGAEEAAACLDRTGITFLFAPVFHPAFRHTAGPRRELGARTVFNLLGP 170          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PELUB (Anthranilate phosphoribosyltransferase OS=Pelagibacter ubique GN=trpD PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.132e-29
Identity = 70/174 (40.23%), Postives = 106/174 (60.92%), Query Frame = 2
Query:  188 IDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ID L  + DL+ AE++ + + L+N +A +  I  FL LL +KGE+  EI G    +++  +K   + D +D  GTGGDG NT+NIST +++L ++ G KVAK             DVLEAL + IDL+P+ +   + +   GFM +  YH AM+FV P RKK+  +T+FN++GP
Sbjct:    5 IDKLKDKQDLSFAESKNAFEILMNGKASDDEIFDFLTLLSSKGESSDEIAG-GVFVLRDKSKRVNVDDCIDTCGTGGDGMNTLNISTASALLLSSMGIKVAKHGNKAVSSKCGSGDVLEALNIKIDLEPKDIEEQIKKNNFGFMFAPNYHSAMRFVGPTRKKIGKRTIFNMIGP 177          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_METVS (Anthranilate phosphoribosyltransferase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.132e-29
Identity = 74/176 (42.05%), Postives = 105/176 (59.66%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N+L++C     +LT  E+    + LL E+ E  I+A+L  L+ KG T  EI G A+AM   A K++ LG+  D  GTGGDG+ T+N+ST  SI+ A C  KVAK             +V EALG  I  +P+  +  +++    F+ + KYHPA+K + PVR +LK+KTVFNILGP
Sbjct:    3 NKLVEC----ENLTFEESYELFNMLLEES-EIRIAAYLTALQTKGVTADEIAGFAKAMRDNAVKID-LGEVTDTCGTGGDGSKTINVSTAVSIILA-CFTKVAKHGNVSVTSKSGSANVYEALGCKILENPDEAKVSIEKTNFAFLFAPKYHPALKKIMPVRSELKIKTVFNILGP 171          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_GEOUR (Anthranilate phosphoribosyltransferase OS=Geobacter uraniireducens (strain Rf4) GN=trpD PE=3 SV=1)

HSP 1 Score: 127.102 bits (318), Expect = 9.132e-29
Identity = 72/186 (38.71%), Postives = 102/186 (54.84%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE---------------GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++ R DLTE+E    +D +++ EA  A I+AF+  LR KGET  EI G AR M     ++                 L   +D  GTGG   NT N+ST  + + +ACG KVAK             DVLE+LGV +D+  E + RC++E GIGF+ +   H AMK+    RK++ ++T+FNILGP
Sbjct:    9 VVEREDLTESEMIQVMDQVMSGEATPAQIAAFITALRMKGETVAEITGAARVMRDKVTRIRVGKNILDMDRDDINVDLETILDTCGTGGSCTNTFNVSTTVAFVVSACGVKVAKHGNRSVSSACGSADVLESLGVNLDVTQETIERCINEIGIGFLFAPALHGAMKYAIGPRKEIGIRTIFNILGP 194          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PSEE4 (Anthranilate phosphoribosyltransferase OS=Pseudomonas entomophila (strain L48) GN=trpD PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.193e-28
Identity = 71/173 (41.04%), Postives = 100/173 (57.80%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++  +DL+  E +  +  ++  +  EA I AFL+ +R K E+  EIVG    M + A KVE   L   VDIVGTGGDGAN  N+ST ++ + AA G  VAK             D+LEA G+ ++L P  V RC+D  GIGFM +  +H AMK     R+ L ++T+FN+LGP
Sbjct:   10 IVGHLDLSTEEMRDVMRQIMTGQCSEAQIGAFLMGMRMKSESIDEIVGAVSVMRELADKVELKSLDGVVDIVGTGGDGANIFNVSTASAFVIAAAGCTVAKHGNRAVSGKSGSADLLEAAGIYLNLTPVQVARCIDSLGIGFMFAQTHHSAMKHAAGPRRDLGLRTLFNMLGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_MYCPA (Anthranilate phosphoribosyltransferase OS=Mycobacterium paratuberculosis GN=trpD PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.193e-28
Identity = 73/169 (43.20%), Postives = 97/169 (57.40%), Query Frame = 2
Query:  212 DLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEG---LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            DL   +A  ++D ++  EA  A I+AF V ++ K  T  E++ LA  M+ +A          D VDIVGTGGDG NT+N+ST A+I+AAA G  V K             D LE LGV IDL PE V R V E GIGF  +  +HP+ +    VR+++ V TVFN+LGP
Sbjct:   36 DLARGQAAWAMDQIMTGEASPAQIAAFAVAMQVKVPTSAEVIELAEVMLNHALPFPAGAIRDDTVDIVGTGGDGVNTLNLSTMAAIVAAAAGVPVVKHGNRAASSLSGGADTLEELGVRIDLGPEQVARSVAEVGIGFCFAPLFHPSYRHTSAVRREIGVPTVFNLLGP 204          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_STRMK6.992e-2947.95Anthranilate phosphoribosyltransferase OS=Stenotro... [more]
TRPD_PSEPF6.992e-2939.88Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_LEUMM6.992e-2942.05Anthranilate phosphoribosyltransferase OS=Leuconos... [more]
TRPD_GEOLS6.992e-2940.88Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD2_STRCO6.992e-2943.37Anthranilate phosphoribosyltransferase 2 OS=Strept... [more]
TRPD_PELUB9.132e-2940.23Anthranilate phosphoribosyltransferase OS=Pelagiba... [more]
TRPD_METVS9.132e-2942.05Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_GEOUR9.132e-2938.71Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_PSEE41.193e-2841.04Anthranilate phosphoribosyltransferase OS=Pseudomo... [more]
TRPD_MYCPA1.193e-2843.20Anthranilate phosphoribosyltransferase OS=Mycobact... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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