CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_JANMA (Anthranilate phosphoribosyltransferase OS=Janthinobacterium sp. (strain Marseille) GN=trpD PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.193e-28
Identity = 69/151 (45.70%), Postives = 93/151 (61.59%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E    +I+A  + LR K E+ GEI   A+ M +++ KV      + +DIVGTGGDGANT NIST +  +AA+ GA++AK             DVLE+LG  I+L PE V   + + GIGFM +  +H AMK   PVRK+L V+T+FNILGP
Sbjct:   34 EMSPVMIAALTMGLRVKKESIGEIAAAAQVMREFSTKVPLTDTTNLLDIVGTGGDGANTFNISTASMFVAASAGARIAKHGGRSVSSSSGSADVLESLGANINLKPELVAESIAQTGIGFMFAPNHHAAMKHAAPVRKELGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CYAP8 (Anthranilate phosphoribosyltransferase OS=Cyanothece sp. (strain PCC 8801) GN=trpD PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.193e-28
Identity = 72/188 (38.30%), Postives = 109/188 (57.98%), Query Frame = 2
Query:  155 TRPQTPCFNELIDCLISRVDLTEAEAQASLDYLLNEADEALIS-AFLVLLRAKGETFGEIVGLARAMIKYA---AKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            T+  T  + EL+  L+ +  L++ +A   ++  L+EA   +IS A LV ++ KG +  E+ G+A+ +   +     ++     +D  GTGGDGA+T NIST  + +AAA G KVAK             DVLE LGV +    E V   +DE G+ F+ +  +HPAMK+V P+RK LKV+T+FN+LGP
Sbjct:    2 TQDSTNLWPELLQQLLDKQSLSQLQASQLMEGWLSEAIPPVISGAILVAIQLKGVSGDELAGMAQVLQSQSLNETSIKHTEPVIDTCGTGGDGASTFNISTAVAFVAAAAGVKVAKHGNRSASSKVGSADVLEYLGVKLSAPSEKVAGALDEVGVTFLFAPGWHPAMKYVAPLRKTLKVRTIFNLLGP 189          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_AZOC5 (Anthranilate phosphoribosyltransferase OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=trpD PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.193e-28
Identity = 73/178 (41.01%), Postives = 98/178 (55.06%), Query Frame = 2
Query:  176 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            F  L++ +     L   EA  + D +++ E   + + A L+ LR +GET  EIVG    M      V+    +VD+VGTGGD + + NIST AS + A  G  VAK             DVL ALGV IDL P  + RC+ E GIGFM +  +HPAMK V P R +L  +T+FN+LGP
Sbjct:    4 FRPLLNKVAMGTALNRDEAAYAFDKMMSGETTPSQMGALLMGLRVRGETVDEIVGAVSVMRAKMLTVDAPVGSVDVVGTGGDASGSYNISTCASFIVAGAGVPVAKHGNRALSSKSGAADVLAALGVRIDLAPAAISRCIAETGIGFMFAPTHHPAMKNVGPTRVELGTRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_AERHH (Anthranilate phosphoribosyltransferase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=trpD PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.193e-28
Identity = 63/150 (42.00%), Postives = 93/150 (62.00%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLG-DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E D  ++++ L  L+ KGET  EI G A A++  A        +  DIVGTGGDG NT+N+ST ++++AAACG KVAK             D+L+ +G+ +D+ P   RRC+DE GI F+ + +YH  ++   PVR+ LK +T+FN+LGP
Sbjct:   30 EVDPIVLASLLTALKIKGETPEEIAGAAEALLAEARDFPRPDYEFCDIVGTGGDGLNTINVSTTSALVAAACGLKVAKHGNRSVSSKSGSSDLLDKMGIKLDMSPAQARRCLDELGICFLFAPQYHAGVRHAMPVRQALKTRTLFNVLGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SULIM (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=trpD PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28
Identity = 77/177 (43.50%), Postives = 105/177 (59.32%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N+++  LI++ DL   EA+     ++  E  E L+SA LV LR KGE+  EIVG ARAM + A K++ + +A+D  GTGGDG  TVN+ST ++IL +     VAK             DVLEALG  I + PE  +  V +    F+ +  YHPAMK V  VRK L ++T+FNILGP
Sbjct:    4 NDILKKLINKSDLEIDEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKID-VPNAIDTAGTGGDGLGTVNVSTASAILLSLINP-VAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKELVHKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGP 178          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_SULIK (Anthranilate phosphoribosyltransferase OS=Sulfolobus islandicus (strain M.16.4 / Kamchatka #3) GN=trpD PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28
Identity = 77/177 (43.50%), Postives = 105/177 (59.32%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N+++  LI++ DL   EA+     ++  E  E L+SA LV LR KGE+  EIVG ARAM + A K++ + +A+D  GTGGDG  TVN+ST ++IL +     VAK             DVLEALG  I + PE  +  V +    F+ +  YHPAMK V  VRK L ++T+FNILGP
Sbjct:    4 NDILKKLINKSDLEIDEAEELAKAIIRGEVPEILVSAILVALRMKGESKNEIVGFARAMRELAIKID-VPNAIDTAGTGGDGLGTVNVSTASAILLSLINP-VAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKELVHKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGP 178          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_MESSB (Anthranilate phosphoribosyltransferase OS=Mesorhizobium sp. (strain BNC1) GN=trpD PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28
Identity = 69/165 (41.82%), Postives = 95/165 (57.58%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L+ AEA+ +   +++ EA  + I  FL+ LR +GET  EI G    M      V    +AVDIVGTGGD + T N+ST A+ + A CG  VAK             D L ALGV I+L P+ +  C+ EAG+GFM +  +H AM+ V P R +L  +T+FN+LGP
Sbjct:   17 LSFAEAREAFGIIMSGEATPSQIGGFLMALRVRGETVDEISGAVDTMRSKMLPVTAPAEAVDIVGTGGDASGTYNVSTCAAFIVAGCGVPVAKHGNRALSSKSGAADSLVALGVNIELGPDQIAACIAEAGVGFMFAPSHHAAMRHVGPTRVELGTRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LEGPC (Anthranilate phosphoribosyltransferase OS=Legionella pneumophila (strain Corby) GN=trpD PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28
Identity = 65/175 (37.14%), Postives = 100/175 (57.14%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L + L+SR DL+  + Q  +   +  E  +  I+ FL L+R K ET  E+   A+ M + A K++     +DIVGTGGDG NT N+ST  S + AA G KVAK             D+LE  G +++L    V+ C+++  + F+ +  YHPAM+  R  R++L ++T+FN+LGP
Sbjct:    6 LFEQLLSRQDLSSDQMQEVIHACMTGEFSDVQIATFLALMRMKSETVNELTAAAKVMRQLAHKIDLGNPLIDIVGTGGDGRNTFNVSTACSFVVAAAGIKVAKHGNRSVSSRSGSADLLEQAGFILNLSDSQVQNCINQCQLAFLFAPHYHPAMQHARAARQQLGIRTLFNLLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_LACCA (Anthranilate phosphoribosyltransferase OS=Lactobacillus casei GN=trpD PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28
Identity = 72/176 (40.91%), Postives = 103/176 (58.52%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + I+ +++  +LT  E +A LD ++N EA E   ++ L  L AK  T  EI G A +M  +A       D ++IVGTGGD ANT NIST ++I+ AA G +VAK             DVLEALG+ I+  P      + E  + F+ + +YH +MK+V PVRK+L  +T+FNILGP
Sbjct:    4 QAIEKVVNHENLTFEETEAVLDEIMNGEASEVQTASLLTALTAKNPTIDEIAGAAASMRSHALAFPETKDVLEIVGTGGDHANTFNISTTSAIVVAATGTRVAKHGNRAASSKSGAADVLEALGLDINETPAVSYESLQENNLAFLFAQEYHKSMKYVAPVRKQLGFRTIFNILGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BURCH (Anthranilate phosphoribosyltransferase OS=Burkholderia cenocepacia (strain HI2424) GN=trpD PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.558e-28
Identity = 71/146 (48.63%), Postives = 91/146 (62.33%), Query Frame = 2
Query:  275 LISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + +A +  LR K ET GEI   A  M ++A  VE   ++  VDIVGTGGDG++T NIST +  + AA GAKVAK             DVLEALGV IDL  E V   + E G+GFM +  +HPAMK +  VR++L V+T+FNILGP
Sbjct:   39 MAAAIITGLRVKKETIGEIAAAATVMREFANHVEVQDNSNFVDIVGTGGDGSHTFNISTASMFVTAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQSEQVAASIAETGMGFMFAPNHHPAMKNIAAVRRELGVRTIFNILGP 184          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_JANMA1.193e-2845.70Anthranilate phosphoribosyltransferase OS=Janthino... [more]
TRPD_CYAP81.193e-2838.30Anthranilate phosphoribosyltransferase OS=Cyanothe... [more]
TRPD_AZOC51.193e-2841.01Anthranilate phosphoribosyltransferase OS=Azorhizo... [more]
TRPD_AERHH1.193e-2842.00Anthranilate phosphoribosyltransferase OS=Aeromona... [more]
TRPD_SULIM1.558e-2843.50Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_SULIK1.558e-2843.50Anthranilate phosphoribosyltransferase OS=Sulfolob... [more]
TRPD_MESSB1.558e-2841.82Anthranilate phosphoribosyltransferase OS=Mesorhiz... [more]
TRPD_LEGPC1.558e-2837.14Anthranilate phosphoribosyltransferase OS=Legionel... [more]
TRPD_LACCA1.558e-2840.91Anthranilate phosphoribosyltransferase OS=Lactobac... [more]
TRPD_BURCH1.558e-2848.63Anthranilate phosphoribosyltransferase OS=Burkhold... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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