CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BURCJ (Anthranilate phosphoribosyltransferase OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28
Identity = 70/146 (47.95%), Postives = 91/146 (62.33%), Query Frame = 2
Query:  275 LISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + +A +  LR K ET GEI   A  M ++A  VE   ++  VDIVGTGGDG++T NIST +  + AA GAKVAK             DVLEALGV IDL  + V   + E G+GFM +  +HPAMK +  VR++L V+T+FNILGP
Sbjct:   39 MAAAIITGLRVKKETIGEIAAAATVMREFANHVEVQDNSNFVDIVGTGGDGSHTFNISTASMFVTAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQSDQVAASIAETGMGFMFAPNHHPAMKNIAAVRRELGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BURCC (Anthranilate phosphoribosyltransferase OS=Burkholderia cenocepacia (strain MC0-3) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28
Identity = 70/146 (47.95%), Postives = 91/146 (62.33%), Query Frame = 2
Query:  275 LISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + +A +  LR K ET GEI   A  M ++A  VE   ++  VDIVGTGGDG++T NIST +  + AA GAKVAK             DVLEALGV IDL  + V   + E G+GFM +  +HPAMK +  VR++L V+T+FNILGP
Sbjct:   39 MAAAIITGLRVKKETIGEIAAAATVMREFANHVEVQDNSNFVDIVGTGGDGSHTFNISTASMFVTAAAGAKVAKHGNRGVSSKSGSADVLEALGVNIDLQSDQVAASIAETGMGFMFAPNHHPAMKNIAAVRRELGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BACPU (Anthranilate phosphoribosyltransferase OS=Bacillus pumilus GN=trpD PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28
Identity = 73/177 (41.24%), Postives = 102/177 (57.63%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N  +  L++   L+E EA   + D +     +A ++A L +L  +GET  E+ G  +AM + AA +E   D VD  GTGGDG +T NIST A+I+ +A GAK+AK             DVLE LG+ I   PE  RR + E  +GF+ +  YH +MK V  VRK+L  +TVFN+LGP
Sbjct:    2 NHRLSALVNGGFLSENEANKLMHDMMSGFLTDAEVAASLSILAHRGETAEEMTGFVKAMRQNAAPMERALDVVDTCGTGGDGLSTFNISTAAAIVRSAAGAKIAKHGNRSVSSKSGSADVLECLGIHIQSTPEETRRQIQEKNMGFLFAPLYHSSMKQVAAVRKQLGFRTVFNLLGP 178          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BACLD (Anthranilate phosphoribosyltransferase OS=Bacillus licheniformis (strain DSM 13 / ATCC 14580) GN=trpD PE=3 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.470e-28
Identity = 71/177 (40.11%), Postives = 98/177 (55.37%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASL-DYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            NEL+   ++   L E EA + + D +      A I   L +L  +GET  EI G  RAM + A  ++G    VD  GTGGDG++T NIST A+I+A++ GAK+AK             DVLE LGV I   PE   + ++   +GF+ +  YH +MK V   RK L  +TVFN+LGP
Sbjct:    2 NELLKSCVNGRTLNEIEAHSIMRDMMTGSLSAAEIGGLLSVLAYRGETAEEITGFVRAMREQAHTIDGPEHVVDTCGTGGDGSSTFNISTAAAIIASSAGAKIAKHGNRSVSSKSGSADVLEYLGVSIQTSPEETIKSIERRNMGFLYAPSYHSSMKHVAGARKDLAFRTVFNLLGP 178          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BACCA (Anthranilate phosphoribosyltransferase (Fragment) OS=Bacillus caldotenax GN=trpD PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.532e-28
Identity = 65/165 (39.39%), Postives = 98/165 (59.39%), Query Frame = 2
Query:  215 LTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            LTE EA A+++ +++ EA ++ I++ L +LR +GET  E+VG  RAM      +E   D +D  GTGGDGA T N+ST A+I+ ++ G KVAK             DVLE LG+ I   P   ++ ++  G+ F+ +  YH AMK     RK++  +TVFN++GP
Sbjct:   15 LTEDEAYAAMNIIMSGEATDSQIASLLSMLRLRGETVDELVGFVRAMRDRMTAIEASDDVIDTCGTGGDGAATFNVSTAAAIVISSLGVKVAKHGNRAVSSKSGSADVLERLGIDIHTSPSAAKQALETKGLAFLFAPLYHAAMKHAAGPRKEIGFRTVFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_ACIBY (Anthranilate phosphoribosyltransferase OS=Acinetobacter baumannii (strain AYE) GN=trpD PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.532e-28
Identity = 64/178 (35.96%), Postives = 105/178 (58.99%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + ++ +   + LT+ + +  +  ++  EA EA I A ++ LR KGE+  E+   AR M ++A K++   +   VDIVGTGGDG N  N+ST +S + AA GA +AK             D+LE  G+ +DLD +   RC+ E G+GF+ +  +H AMK+    R++L ++++FN+LGP
Sbjct:    5 QALNHITKNIHLTQPQMEEIMRSIMQGEATEAQIGALMMGLRMKGESIDEMTAAARVMREFAIKIDVSDIKHLVDIVGTGGDGQNLFNVSTASSFVIAAAGATIAKHGNRGVSSKSGSSDLLEQAGIHLDLDMQQTERCIREMGVGFLFAPNHHKAMKYAAGPRRELGIRSIFNLLGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_ACIBT (Anthranilate phosphoribosyltransferase OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=trpD PE=3 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.532e-28
Identity = 64/178 (35.96%), Postives = 105/178 (58.99%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + ++ +   + LT+ + +  +  ++  EA EA I A ++ LR KGE+  E+   AR M ++A K++   +   VDIVGTGGDG N  N+ST +S + AA GA +AK             D+LE  G+ +DLD +   RC+ E G+GF+ +  +H AMK+    R++L ++++FN+LGP
Sbjct:    5 QALNHITKNIHLTQPQMEEIMRSIMQGEATEAQIGALMMGLRMKGESIDEMTAAARVMREFAIKIDVSDIKHLVDIVGTGGDGQNLFNVSTASSFVIAAAGATIAKHGNRGVSSKSGSSDLLEQAGIHLDLDMQQTERCIREMGVGFLFAPNHHKAMKYAAGPRRELGIRSIFNLLGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_ACIBS (Anthranilate phosphoribosyltransferase OS=Acinetobacter baumannii (strain SDF) GN=trpD PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 4.532e-28
Identity = 64/178 (35.96%), Postives = 105/178 (58.99%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            + ++ +   + LT+ + +  +  ++  EA EA I A ++ LR KGE+  E+   AR M ++A K++   +   VDIVGTGGDG N  N+ST +S + AA GA +AK             D+LE  G+ +DLD +   RC+ E G+GF+ +  +H AMK+    R++L ++++FN+LGP
Sbjct:    5 QALNHITKNIHLTQPQMEEIMRSIMQGEATEAQIGALMMGLRMKGESIDEMTAAARVMREFAIKIDVSDIKHLVDIVGTGGDGQNLFNVSTASSFVIAAAGATIAKHGNRGVSSKSGSSDLLEQAGIHLDLDMQQTERCIREMGVGFLFAPNHHKAMKYAAGPRRELGIRSIFNLLGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_XYLFM (Anthranilate phosphoribosyltransferase OS=Xylella fastidiosa (strain M12) GN=trpD PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.919e-28
Identity = 73/173 (42.20%), Postives = 100/173 (57.80%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKV--EGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            +I   ++ + E    +  ++N E    +++A L  LR K ET GEI G A  M +++ KV  +     VDIVGTGGDG +T NIST A  +AAA GAKVAK             DVLE LG  I+L P  V   +   G+GFM +  +HP M+ V PVR+++ V+T+FNILGP
Sbjct:   12 IIEHREILQDEMVQLMRQIMNGEVSGIMVAAILAGLRVKKETVGEIAGAATVMREFSRKVNVQDRTHLVDIVGTGGDGWHTFNISTCAMFVAAAAGAKVAKHGNRSVSSKSGSADVLEVLGASIELQPLEVAEAIGCIGVGFMFAPIHHPVMQVVSPVRREMGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PYRAE (Anthranilate phosphoribosyltransferase OS=Pyrobaculum aerophilum GN=trpD PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 5.919e-28
Identity = 63/152 (41.45%), Postives = 90/152 (59.21%), Query Frame = 2
Query:  251 LLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            L     E  I+A L  ++ +GET  E+ G  +   ++A +V    +A+D  GTGGDGA T+N+ST A+I+AAA GAKV K             D +EA+G  +++ PE   R V+E G  F+ + KYHPA   V PVR++L  +TVFNI+GP
Sbjct:   29 LTGTLSEVEIAASLTAMKVRGETAEEVAGFVKMAREFAVRVPLTVEAIDTAGTGGDGAGTINLSTAAAIVAAAAGAKVLKHGNRSASGMFGSADFMEAVGYNLEIGPERAARLVEEVGFAFVFAPKYHPAFARVAPVRRQLPFRTVFNIVGP 180          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_BURCJ3.470e-2847.95Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_BURCC3.470e-2847.95Anthranilate phosphoribosyltransferase OS=Burkhold... [more]
TRPD_BACPU3.470e-2841.24Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_BACLD3.470e-2840.11Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_BACCA4.532e-2839.39Anthranilate phosphoribosyltransferase (Fragment) ... [more]
TRPD_ACIBY4.532e-2835.96Anthranilate phosphoribosyltransferase OS=Acinetob... [more]
TRPD_ACIBT4.532e-2835.96Anthranilate phosphoribosyltransferase OS=Acinetob... [more]
TRPD_ACIBS4.532e-2835.96Anthranilate phosphoribosyltransferase OS=Acinetob... [more]
TRPD_XYLFM5.919e-2842.20Anthranilate phosphoribosyltransferase OS=Xylella ... [more]
TRPD_PYRAE5.919e-2841.45Anthranilate phosphoribosyltransferase OS=Pyrobacu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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