CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_VEREI (Anthranilate phosphoribosyltransferase OS=Verminephrobacter eiseniae (strain EF01-2) GN=trpD PE=3 SV=2)

HSP 1 Score: 141.739 bits (356), Expect = 3.583e-33
Identity = 77/151 (50.99%), Postives = 97/151 (64.24%), Query Frame = 2
Query:  260 EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E   A+ +A +  LR K ET GEI   A+ M +++ KV+       VDIVGTGGDGA+T NIST A  +AAA GAKV+K             DV+EALG+ I L PE + RC+ E GIGFM +  +HPAMK V PVRK+L V+T+FNILGP
Sbjct:   34 ELSPAMTAAIITGLRVKKETIGEITAAAQVMREFSTKVQVPDRKHLVDIVGTGGDGASTFNISTCAMFVAAAAGAKVSKHGGRSVSSKSGSADVMEALGIHIHLAPEAIARCIAEVGIGFMFAPNHHPAMKNVAPVRKELGVRTIFNILGP 184          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_NITWN (Anthranilate phosphoribosyltransferase OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=trpD PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.583e-33
Identity = 78/175 (44.57%), Postives = 105/175 (60.00%), Query Frame = 2
Query:  185 LIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            LI  + +   LT  EA A+ + +++ EA  + +   L+ LR +GET  EI G   AM     +V+   DAVD+VGTGGDG+ +VN+ST AS + A  G  VAK             D L ALG+ IDL PE V RC++EAGIGFM +  +HPAMK V P R +L  +T+FN+LGP
Sbjct:    7 LIGKVATGATLTREEAAAAFNSMMSGEATPSQMGGLLMALRVRGETVDEITGAVSAMRSMMLRVKAPVDAVDVVGTGGDGSGSVNVSTCASFIVAGAGVTVAKHGNRALSSRSGAADCLAALGIRIDLTPEQVGRCINEAGIGFMFAPAHHPAMKNVGPTRVELATRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_DESAA (Anthranilate phosphoribosyltransferase OS=Desulfatibacillum alkenivorans (strain AK-01) GN=trpD PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.583e-33
Identity = 74/179 (41.34%), Postives = 109/179 (60.89%), Query Frame = 2
Query:  176 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            F+EL+  ++S  DL E E    +D +++ E +   I+AF+  L  KGETF E+ G AR+M + A +++      VD  GTGGDGA+T NIST ++ + A CG  VAK             DVLEALGV +D  PE V + ++E GIGF+ +  YH AM+F  P R+ + ++++FN+LGP
Sbjct:    2 FSELLKKIVSGQDLAEDETTTMMDAIMSGEVEVPAIAAFMAALATKGETFTELAGAARSMRRKATRIQVSSNTVVDTCGTGGDGASTFNISTTSAFVVAGCGVTVAKHGNRSVSSKCGSADVLEALGVKLDTHPEVVEQGIEEIGIGFLFAPMYHSAMRFAMPARQAVGIRSIFNMLGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_GEOSF (Anthranilate phosphoribosyltransferase OS=Geobacter sp. (strain FRC-32) GN=trpD PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.111e-33
Identity = 78/186 (41.94%), Postives = 108/186 (58.06%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE---------------GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++ R DL+++E    +D +++ EA  A I+AF+  LR KGET  EI G AR M   A ++                 L   +D+VGTGGDG NT NIST  S + AACG KVAK             DV+EALG+ +++ PE V  C++EAGIGF+ +   H AMKF    RK++ ++T+FNILGP
Sbjct:    9 VVEREDLSQSEMIQVMDQIMSGEATPAQIAAFITALRMKGETVAEIAGAARVMRDRATRIRVGKNVLDLDRDDINIDLETILDVVGTGGDGTNTFNISTTVSFVVAACGVKVAKHGNRSVSSACGSADVVEALGISLEVTPETVENCINEAGIGFLYAPALHGAMKFAIGPRKEIGIRTIFNILGP 194          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_XANP2 (Anthranilate phosphoribosyltransferase OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=trpD PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.982e-33
Identity = 78/178 (43.82%), Postives = 102/178 (57.30%), Query Frame = 2
Query:  176 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            F  L+  + +   LT  EA    D +++ EA  + + A L+ LR +GET  EI G    M      VE   +AVD+VGTGGD + + NIST AS + A  G  VAK             DVL ALGV IDLDP G+ RC+ EAGIGFM +  +HPAMK V P R ++  +T+FN+LGP
Sbjct:    4 FKPLLGKVATGASLTRDEAAYVFDKMMSGEATPSQMGALLMGLRVRGETVEEIAGAVSVMRSKMLSVEAPSEAVDVVGTGGDASGSYNISTCASFIVAGAGVPVAKHGNRALSSKSGAADVLAALGVRIDLDPAGISRCIAEAGIGFMFAPSHHPAMKHVGPTRVEMGTRTIFNLLGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_STRAW (Anthranilate phosphoribosyltransferase OS=Streptomyces avermitilis GN=trpD PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.982e-33
Identity = 79/176 (44.89%), Postives = 108/176 (61.36%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E+++ L+   D +  +   ++D ++  EA +A I+ FLV LRAKGET  EI GL RAM ++A  +E  G  VDIVGTGGDGA TVNIST +SI+ A  GAKV K             DVLE LG+ + L P+ V    +EAGI    + K+HPA++ V   R +L ++T FN+LGP
Sbjct:   19 EVLNGLLDGRDQSADDTAWAMDRIMRGEATDAQIAGFLVALRAKGETVEEISGLVRAMYEHANLIEVPGATVDIVGTGGDGAKTVNISTMSSIVVAGTGAKVVKHGNRAASSASGSSDVLEKLGINLQLTPKRVAEVAEEAGITICFAVKFHPALRHVAAARGQLGIRTTFNVLGP 194          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_NATPD (Anthranilate phosphoribosyltransferase OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=trpD PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.042e-32
Identity = 75/166 (45.18%), Postives = 100/166 (60.24%), Query Frame = 2
Query:  212 DLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            DLT+AEA+ +   +  EA EA I A L  LRAKGET  EI G A  M   A +++      VD  GTGGDG +T+N+ST +S + A  G  VAK             DVLE +GV ID +P  V  C++E G+GFM++  +HPAMK V   RK+L ++T+FN+LGP
Sbjct:   13 DLTQAEAREAASLVFEEATEAQIGALLSALRAKGETEPEIAGFAEGMRAAARRIDPDRSPLVDTCGTGGDGHDTINVSTTSSFVVAGAGVPVAKHGNYSVSSSSGSADVLEEIGVTIDAEPPAVETCIEETGMGFMLAPVFHPAMKAVIGPRKELGMRTIFNVLGP 178          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_METBU (Anthranilate phosphoribosyltransferase OS=Methanococcoides burtonii (strain DSM 6242) GN=trpD PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.042e-32
Identity = 77/174 (44.25%), Postives = 111/174 (63.79%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYA----AKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            LI   DL+  E++A++  +L  A +A + AF++ ++ KGET  E+ G A+ M+  A     KV+G+   VD  GTGGD  NT+NIST A+I+AAA G  VAK             DV + LGV IDL+P+ V+  +++ GIGFM++ K+HPAMK +   RK+L V+T+FNILGP
Sbjct:    8 LIDGHDLSMVESEAAMGQILESATDAQVGAFVMGMKMKGETSDEVAGFAKGMLNVANMIRPKVDGI--LVDTCGTGGDRHNTINISTAAAIVAAAAGVTVAKHGNHSFTSLSGSADVFKELGVKIDLEPDLVKSSIEDIGIGFMLAPKFHPAMKRMVGPRKELAVRTMFNILGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CLOK5 (Anthranilate phosphoribosyltransferase OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=trpD PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.042e-32
Identity = 76/178 (42.70%), Postives = 110/178 (61.80%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            NE I  ++S  DL+E++++  ++ ++N +   ALI+ FL+ L+ KGE+  EI G A+AM   A  V+     A+D  GTGGDG  T NIST A+I+AA+ G KVAK             DVL+ LG+ I+L+   V  C+D  G+GF+ +  YH AMK V  +R+ L V+T+FNILGP
Sbjct:    3 NEAIKEVLSGKDLSESQSEQVMENIMNGQESSALIAGFLIALKMKGESIPEITGCAKAMRNMAVPVKLKSQYAIDTCGTGGDGGRTFNISTAAAIIAASAGVKVAKHGNRAVSSQSGSADVLKELGININLEKSKVEHCIDNVGMGFLFAPSYHSAMKNVAGIRRDLGVRTIFNILGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CLOK1 (Anthranilate phosphoribosyltransferase OS=Clostridium kluyveri (strain NBRC 12016) GN=trpD PE=3 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.042e-32
Identity = 76/178 (42.70%), Postives = 110/178 (61.80%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGD-AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            NE I  ++S  DL+E++++  ++ ++N +   ALI+ FL+ L+ KGE+  EI G A+AM   A  V+     A+D  GTGGDG  T NIST A+I+AA+ G KVAK             DVL+ LG+ I+L+   V  C+D  G+GF+ +  YH AMK V  +R+ L V+T+FNILGP
Sbjct:    3 NEAIKEVLSGKDLSESQSEQVMENIMNGQESSALIAGFLIALKMKGESIPEITGCAKAMRNMAVPVKLKSQYAIDTCGTGGDGGRTFNISTAAAIIAASAGVKVAKHGNRAVSSQSGSADVLKELGININLEKSKVEHCIDNVGMGFLFAPSYHSAMKNVAGIRRDLGVRTIFNILGP 180          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_VEREI3.583e-3350.99Anthranilate phosphoribosyltransferase OS=Verminep... [more]
TRPD_NITWN3.583e-3344.57Anthranilate phosphoribosyltransferase OS=Nitrobac... [more]
TRPD_DESAA3.583e-3341.34Anthranilate phosphoribosyltransferase OS=Desulfat... [more]
TRPD_GEOSF6.111e-3341.94Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_XANP27.982e-3343.82Anthranilate phosphoribosyltransferase OS=Xanthoba... [more]
TRPD_STRAW7.982e-3344.89Anthranilate phosphoribosyltransferase OS=Streptom... [more]
TRPD_NATPD1.042e-3245.18Anthranilate phosphoribosyltransferase OS=Natronom... [more]
TRPD_METBU1.042e-3244.25Anthranilate phosphoribosyltransferase OS=Methanoc... [more]
TRPD_CLOK51.042e-3242.70Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_CLOK11.042e-3242.70Anthranilate phosphoribosyltransferase OS=Clostrid... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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