CN186080

Overview
NameCN186080
Unique NameCN186080
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length708
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig378 contig Csv1_Contig378:145..851. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_PHEZH (Anthranilate phosphoribosyltransferase OS=Phenylobacterium zucineum (strain HLK1) GN=trpD PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26
Identity = 71/178 (39.89%), Postives = 96/178 (53.93%), Query Frame = 2
Query:  176 FNELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            F  L+  L     L++ +A A     L  E   A + A L  +R +GET GEI   ARAM + A  +E     +D+ GTGGDG +T+NIST    +AA  G KVAK             DVL  LGV I   PE   + +DEAGI F+ +  +H AM+ V P+R +L  +T+FN+LGP
Sbjct:    5 FKPLLSRLADGATLSDDDADAFFSACLRGEPTPAQVGAALTAMRMRGETLGEIAACARAMRRAAIHLEPPFPTIDVCGTGGDGLHTLNISTAVGFVAAGGGLKVAKHGNRAMSSKSGTADVLGELGVNIAAPPEKQLQALDEAGICFLFAPAHHSAMRHVSPIRAELGFRTIFNLLGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_DESAP (Anthranilate phosphoribosyltransferase OS=Desulforudis audaxviator (strain MP104C) GN=trpD PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26
Identity = 76/177 (42.94%), Postives = 98/177 (55.37%), Query Frame = 2
Query:  182 ELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAV-DIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E +  L+   DL + EA+A +  +++ EA  A I A L  LR K ET  EI G ARAM   A +V    + V D  GTGGDGA T NIST A+ + A  G  VAK             DVL  LGV +DL P  +  C+DE GI F+ + + H AM+     RK+L ++TVFNILGP
Sbjct:    4 EALQKLVGGEDLEQHEAEAVMAEIMDGEATSAQIGALLAGLRLKKETAAEIRGFARAMRARAEQVPTRHELVADTCGTGGDGAQTFNISTTAAFVVAGAGVPVAKHGNTAVSSRCGSADVLRHLGVNLDLTPAQMGACLDEVGIAFLFAPRLHRAMQHAAGPRKELGIRTVFNILGP 180          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CLOCE (Anthranilate phosphoribosyltransferase OS=Clostridium cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584 / H10) GN=trpD PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26
Identity = 71/176 (40.34%), Postives = 97/176 (55.11%), Query Frame = 2
Query:  182 ELIDCLISRVDLT-EAEAQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            E I  +I++ DL  +   Q   + +   A  A I +FL  +R KGET  EI   A  M +   ++    D +DIVGTGGD ANT NIST +S + +A G  VAK             D+LEALG+ I L  E     + + G+ FM +  YH +MK+  PVRK+L V+T+FNILGP
Sbjct:    4 EAIYQVINKQDLDLDKTIQVMEEIMEGRATNAQIGSFLTAMRMKGETIDEITACATVMRQKCKRIHPEKDVLDIVGTGGDEANTFNISTVSSFVVSAGGVPVAKHGGRSVSSKCGSADLLEALGINIALSAEQSAEILQKIGMCFMFAPTYHASMKYAAPVRKELSVRTIFNILGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_CLOB8 (Anthranilate phosphoribosyltransferase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=trpD PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26
Identity = 72/179 (40.22%), Postives = 103/179 (57.54%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE--GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N+ I  L  R +LTE E +  ++ ++  EA  + I  FLV LR  GET  +I+G  +A+     KVE       +D  GTGGDG+ T NIST  +I+AA+ GAKVAK             DVL  LG+ ID D    ++ ++E G+ F+ + KY+ AMK V   RK+L ++T+FN+LGP
Sbjct:    4 NDAIKKLALREELTEDEVRGVINQIMKGEATSSQIGGFLVGLRVNGETPRQILGAVKAIRDNGVKVEIENTEHLIDTCGTGGDGSKTFNISTAVAIVAASGGAKVAKHGNRAVSSKSGCADVLVELGINIDFDEIQSKKIIEENGMAFLFAPKYNGAMKNVSKERKELGIRTIFNLLGP 182          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_ALHEH (Anthranilate phosphoribosyltransferase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=trpD PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.116e-26
Identity = 69/167 (41.32%), Postives = 96/167 (57.49%), Query Frame = 2
Query:  212 DLTEAE-AQASLDYLLNEADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVE-GLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            DLTEAE  +     +  EA  A I  FL+ LR KGET  EI   AR M + A +V       +D  GTGGD ++T+N+ST  + +AAA GA+VAK             DVLEA G  +DL+ + V  C+   G+GF+ + ++H AMK     R+++ V+T+FNILGP
Sbjct:   15 DLTEAEMTEVMRQIMTGEATPAQIGGFLIGLRMKGETVAEITAAARVMRELATRVTVDEPHLLDTCGTGGDASHTLNVSTACAFVAAAGGARVAKHGNRSVSSSCGSADVLEAAGARLDLNADQVAECIRRVGVGFLFAPQHHSAMKHAIGPRREMGVRTLFNILGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_HAEIE (Anthranilate phosphoribosyltransferase OS=Haemophilus influenzae (strain PittEE) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26
Identity = 73/179 (40.78%), Postives = 104/179 (58.10%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLN-EADEALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEGLGDA--VDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N+L++ L S   L+ +E+ A  + ++  E     I+A L+ L+ +G    EI G   A ++ A KV    D    DIVGTGGDG NT+NIST ++I+AA+ GAKVAK             DVL ALGV +++  E  R+ +DE G+ F+ + +YH   + V PVR  LK  T+FNILGP
Sbjct:    4 NQLLEQLYSGHSLSTSESTALFNAVIQGELSNEQIAAMLIALKVRGANTEEITGAVAASLQNA-KVFPRPDYPFADIVGTGGDGQNTINISTASAIVAASMGAKVAKHGNRSVSSKSGASDVLTALGVNVNVTLEQARQALDEIGVCFLFAQQYHSGFRHVAPVRAALKTHTIFNILGP 181          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_GEOBB (Anthranilate phosphoribosyltransferase OS=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26
Identity = 72/186 (38.71%), Postives = 102/186 (54.84%), Query Frame = 2
Query:  197 LISRVDLTEAEAQASLDYLLNE-ADEALISAFLVLLRAKGETFGEIVGLARAM------IKYAAKVEGLG---------DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            ++ R DL+EAE    +D +++  A  A I++F+  LR KGET  EI G AR M      I+    V G+            +D  GTGG G N+ NIST  + + +ACG KVAK             DVLEALGV +D+ P+ V R + + GIGF+ +   H AMK     R+++ ++T+FNILGP
Sbjct:    9 VVERQDLSEAEMIEVMDQVMSGGATPAQIASFITALRMKGETVDEITGAARVMRDRALPIRVGKSVLGIDRDDINLDRETILDTCGTGGSGTNSFNISTTVAFIVSACGVKVAKHGNRAVSSSCGSADVLEALGVNLDVTPDVVERSIAQIGIGFLFAPALHGAMKHAIGPRREIGIRTIFNILGP 194          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BACC0 (Anthranilate phosphoribosyltransferase OS=Bacillus cereus (strain AH820) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26
Identity = 74/178 (41.57%), Postives = 100/178 (56.18%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLNEAD-EALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEG-LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N  +  L+    LTE E   +   LLNE   E+ I+AFLVLL+AKGET  EI GL RA+ + A      +  A+D  GTGGDGA T NIST ++ + A  G KVAK             D+LE LGV I   P  +   ++  GI F+ +   HPA+K +  +RK+L V T+FN++GP
Sbjct:    2 NNYLRKLVEGQHLTEEEMYKAGLLLLNENILESEIAAFLVLLKAKGETAEEIYGLVRALREKALPFSNHIQGAMDNCGTGGDGAQTFNISTTSAFVLAGAGVKVAKHGNRAVSSKTGSADLLEELGVNISSTPNEIDYLLEHVGIAFLFAPAMHPALKRIMKIRKELNVPTIFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BACAN (Anthranilate phosphoribosyltransferase OS=Bacillus anthracis GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26
Identity = 74/178 (41.57%), Postives = 100/178 (56.18%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLNEAD-EALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEG-LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N  +  L+    LTE E   +   LLNE   E+ I+AFLVLL+AKGET  EI GL RA+ + A      +  A+D  GTGGDGA T NIST ++ + A  G KVAK             D+LE LGV I   P  +   ++  GI F+ +   HPA+K +  +RK+L V T+FN++GP
Sbjct:    2 NNYLRKLVEGQHLTEEEMYKAGLLLLNENILESEIAAFLVLLKAKGETAEEIYGLVRALREKALPFSNHIQGAMDNCGTGGDGAQTFNISTTSAFVLAGAGVKVAKHGNRAVSSKTGSADLLEELGVNISSTPNEIDYLLEHVGIAFLFAPAMHPALKRIMKIRKELNVPTIFNLIGP 179          
BLAST of CN186080 vs. ExPASy Swiss-Prot
Match: TRPD_BACAH (Anthranilate phosphoribosyltransferase OS=Bacillus thuringiensis (strain Al Hakam) GN=trpD PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.458e-26
Identity = 74/178 (41.57%), Postives = 100/178 (56.18%), Query Frame = 2
Query:  179 NELIDCLISRVDLTEAEAQASLDYLLNEAD-EALISAFLVLLRAKGETFGEIVGLARAMIKYAAKVEG-LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQXXXXXXXXXXXXDVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGP 706
            N  +  L+    LTE E   +   LLNE   E+ I+AFLVLL+AKGET  EI GL RA+ + A      +  A+D  GTGGDGA T NIST ++ + A  G KVAK             D+LE LGV I   P  +   ++  GI F+ +   HPA+K +  +RK+L V T+FN++GP
Sbjct:    2 NNYLRKLVEGQHLTEEEMYKAGLLLLNENILESEIAAFLVLLKAKGETAEEIYGLVRALREKALPFSNHIQGAMDNCGTGGDGAQTFNISTTSAFVLAGAGVKVAKHGNRAVSSKTGSADLLEELGVNISSTPNEIDYLLEHVGIAFLFAPAMHPALKRIMKIRKELNVPTIFNLIGP 179          
The following BLAST results are available for this feature:
BLAST of CN186080 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
TRPD_PHEZH1.116e-2639.89Anthranilate phosphoribosyltransferase OS=Phenylob... [more]
TRPD_DESAP1.116e-2642.94Anthranilate phosphoribosyltransferase OS=Desulfor... [more]
TRPD_CLOCE1.116e-2640.34Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_CLOB81.116e-2640.22Anthranilate phosphoribosyltransferase OS=Clostrid... [more]
TRPD_ALHEH1.116e-2641.32Anthranilate phosphoribosyltransferase OS=Alkalili... [more]
TRPD_HAEIE1.458e-2640.78Anthranilate phosphoribosyltransferase OS=Haemophi... [more]
TRPD_GEOBB1.458e-2638.71Anthranilate phosphoribosyltransferase OS=Geobacte... [more]
TRPD_BACC01.458e-2641.57Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_BACAN1.458e-2641.57Anthranilate phosphoribosyltransferase OS=Bacillus... [more]
TRPD_BACAH1.458e-2641.57Anthranilate phosphoribosyltransferase OS=Bacillus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0002F09_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0002F09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN186080 ID=CN186080; Name=CN186080; organism=Citrus sinensis; type=EST; length=708bp
AGGGTTTCTTCCTCTCCATTTAATAATAATCACCCAAACCACCGGCCTTT
CTTACCGTCGCTTGGGAACTGTGGATTTACGACTGCGGGTAATAATCCGA
GATGCAGAGAATTAACTGCTATTCAAACCCCTCAGCCGGCTGTTTCTGAT
AGATACTCGTCCTCAAACGCCCTGCTTTAATGAGTTGATCGATTGCTTGA
TAAGTCGAGTGGATTTAACGGAGGCGGAGGCTCAAGCTTCGCTGGATTAC
TTGTTGAATGAAGCTGATGAGGCCTTGATTAGTGCTTTTCTTGTTTTGCT
CAGAGCCAAAGGAGAAACATTTGGAGAGATTGTGGGATTGGCCAGGGCGA
TGATAAAGTATGCTGCGAAGGTGGAAGGGCTGGGTGATGCAGTTGACATT
GTGGGTACAGGAGGTGATGGTGCAAACACAGTGAACATTTCAACTGGTGC
TTCAATTCTTGCCGCAGCTTGTGGTGCAAAAGTTGCCAAGCAAGGGAGTC
GGTCTAGTTCTTCTGCATGTGGAAGTGCTGATGTGTTAGAAGCTTTGGGT
GTCGTTATTGACTTGGACCCAGAGGGTGTAAGAAGGTGTGTGGATGAGGC
AGGAATTGGTTTCATGATGTCGACAAAGTATCACCCTGCAATGAAGTTTG
TCAGGCCAGTGAGGAAAAAGCTCAAAGTAAAAACTGTATTCAATATATTG
GGTCCTAT
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